kcna10a (kcna10a,LOC107696967,LOC107746531,LOC107559162,LOC107746341,LOC107673534,LOC107598151)


Basic Information

Item Value
gene id kcna10a
gene name kcna10a,LOC107696967,LOC107746531,LOC107559162,LOC107746341,LOC107673534,LOC107598151
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3650109 ~ 3655605 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224160.1
CCCAAATGTAGAACAAGCAACAGGCAGAAACAACAGCCGTCGGGAGACCCCTCTCACACGAGAGGTTGAAGCACCTTGGATTCTTCCTCATTGCGTGGACCTCcacctaaaaaaacaaatgaccgATATCAGTTCAAAATTGTAAACCAGTGGGATTGTCCTGGTGTAGATTCAATTCATTGGTGGTCTGATATCCGGGGCCACATGACTGTCCAGGCTGGAAGAATTGAGGTGGCGCTAGTTGACTTTGAGGGGATGGAGAATACTAACGGTGTGGACAATTTCAATGACCCAGACTATCCAAATGAGATGACGGCTTTGACAGTAGAAATGCCAGAGTTTGGGCCTGACAGCACCTACTGCAATTCATCAAAAGTGTCACCATATAAAGAGAGGATGCCACAAAATTTAGACAAACCTCAATCACCGGTCCTGCCCCCTCACACCAGGAGAGGGCGTGCCAGCTGCGCTAGTCTGATTTCCAACTGGAAATTACTCCTGAACAGTGAAGGAACGCAAAGTGAGACGATCTTCAGTAAACTGGCCAAAGAATACGAGGACTTGTTTATTGACAAGCGACCTCTCGATGACGGCGATCAAAAGGTCATCATTAACATCGCTGGGCTTCGCTTTGAAACCCGCCTGAGGACCCTCGACCAGTTCCCAGACACCCTTCTGGGCGACCCCATGAAAAGAATGGGCTATTTCGACCCCATGAGAAACGAGTATTTCTTTGACCGCAATCGTCCAAGCTTTGACGGGATCTTGTACTACTACCAATCCGGCGGGAAGGTCCGGCGGCCTGCGAACGTACCTTTAGACGTCTTCGCGGATGAGATCATCTTCTACGAGTTGGGACAGGAAGCCATGGACCAGTTTCGCGAAGAGGAAGGATTTATCAAAGACGTGGAGGTCCCATTGCCCTCTAATGAGTTTTACAGGCAGTTCTGGCTGCTCTTTGAGTATCCCGAGAGCTCAAACGCAGCCAGAGGGGTCGCCCTGGTTTCCATCTTCGTCATCGTCATCTCCATCATCATATTCTGCATGGAGACTCTCCCAGAATTCAGAGAAGATATGGAAATTTTTCCAACCGCTGGAGTTTCCTTCAACCAGACGTATCCCTCAGGTGCTCCTCCGAGTGCGTCTCCCAAAACCATCAGCAGCACCTTCTCTGACCCTTTCTTCTTATTAGAGACGGCTTGCATCATCTGGTTCTTCTTTGAGCTCTCCGTACGTTTCCTGGTTTGCCCCAGCAAGCGGGAGTTTTTCAACAACATCATGAACATGATTGACATTGTCTCCATCATCCCCTATTTTGTCACGTTGATAACTGAAGTCGTGACCACCACCAATAAGTCCAACACAGGGCAGAATATGTCACTGGCCATCCTACGAATCATTAGACTGGTGCGAGTCTTCAGGATCTTCAAGCTTTCCAGACACTCCAAAGGGCTGCAGATCCTGGGCCAGACGCTCAAGGCCAGCATGAGGGAACTTGGCCTGCTTatcttctttctcttcatcGGCGTCATCCTCTTCTCAAGCGCCATCTATTTTGCTGAGGTGGATGATCCCAACACCCAGTTTGTTAGCATCCCTGATGGATTCTGGTGGGCTGTGGTGACCATGACCACTGTGGGATATGGAGACATGTGTCCTATTACTTTAGGCGGTAAGATTGTGGGCACTCTATGTGCCATTGCTGTGTTGACCATCGCCCTGCCTGTGCCTGTAATCGTCTCCAATTTTAACTACTTTTACCATAGAGAGACAGAGCAGGAGGAAAAGCAGCCCATAGCTGAATCAACTGATCAAGCTTTAAAGTCAGGGAATACAAAACATGGAAGTAGTTCCTCTCTGAACAAGGCAAATGGGAGCTGGCAGACTGACAAATCCAAGTGTTAAACCCATAtcgaattttattttcatgagcGTGAATCTCATTAAACATGtccaggtcatatttcaccacaaaatcAAGACACCCAGATAGCATAATGCAAGATGACTTCAtatggaaagcatctgctgtgtATGAACATCTAATGAACGTCTTTATGatgtcagttttatttacattcaaatagacGTATTGAAGATGGGCCAGTagta

Function

symbol description
kcna10a Orthologous to human KCNA10 (potassium voltage-gated channel subfamily A member 10).

NR:

description
PREDICTED: potassium voltage-gated channel subfamily A member 10-like

GO: NA

KEGG:

id description
K04881 KCNA10, KV1.8; potassium voltage-gated channel Shaker-related subfamily A member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224160.1 True 2112 mRNA 0.47 3 3650109 3655605

Neighbor

gene id symbol gene type direction distance location
kcna2b kcna2b,LOC107746332,LOC107711719,LOC107697029,LOC107673029,LOC107566069,LOC107598117,LOC108438074 coding upstream 18344 3628747 ~ 3631765 (+)
LOC122329307 LOC107697030,LOC107711716,LOC107746331,LOC107673019,LOC100330283,LOC107598116,LOC104931868,LOC103360392 coding upstream 41768 3605256 ~ 3608341 (+)
slc25a55b zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507 coding upstream 149128 3497006 ~ 3500981 (+)
LOC122328605 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding upstream 153213 3494137 ~ 3496896 (+)
zgc:101663 LOC107709235,LOC107697032,LOC107566074,LOC107746337,LOC107554219,LOC107673483 coding upstream 158487 3483012 ~ 3491622 (+)
LOC122328631 LOC107696966,LOC107746508,LOC107559163 coding downstream 13592 3669197 ~ 3673592 (+)
LOC122329176 LOC107559158,LOC107746523,LOC107559166,LOC107696944,LOC107696945 coding downstream 35677 3691282 ~ 3693981 (+)
LOC122328357 LOC107559166,LOC107696944,LOC107559158,LOC107746523,LOC107696945 coding downstream 41600 3697205 ~ 3698961 (+)
tulp1a LOC107559175,LOC107697025 coding downstream 161627 3817232 ~ 3826580 (+)
tead3a tead3a,LOC107697024,LOC107746506,LOC107707383,LOC107673091,LOC107598123 coding downstream 172982 3828587 ~ 3854436 (+)
G154667 NA non-coding upstream 9428 3639863 ~ 3640681 (+)
G154661 NA non-coding upstream 13832 3634764 ~ 3636277 (+)
LOC122329308 NA non-coding upstream 35265 3608363 ~ 3614844 (+)
G154647 NA non-coding upstream 49253 3600442 ~ 3600856 (+)
G154584 NA non-coding upstream 249351 3400009 ~ 3400758 (+)
G154673 NA non-coding downstream 1494 3657099 ~ 3657405 (+)
LOC122328634 NA non-coding downstream 23114 3678719 ~ 3686108 (+)
G154690 NA non-coding downstream 43504 3699109 ~ 3728810 (+)
G154698 NA non-coding downstream 141749 3797354 ~ 3799284 (+)
G154699 NA non-coding downstream 144745 3800350 ~ 3803764 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 553074 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 640092 2995169 ~ 3010017 (+)
G154424 NA other upstream 693384 2923382 ~ 2956725 (+)
LOC122329169 NA other upstream 706303 2925308 ~ 2943806 (+)
prdm5 prdm5,LOC107698519,LOC107669703 other upstream 1293382 2312722 ~ 2356727 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other downstream 39047 3694652 ~ 3697022 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 1161760 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 2936997 6592602 ~ 6598532 (+)
G155561 NA other downstream 3570389 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 3642755 7298360 ~ 7305534 (+)

Expression


Co-expression Network