slc25a55b (zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507)


Basic Information

Item Value
gene id slc25a55b
gene name zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3497006 ~ 3500981 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224368.1
GTCCCAGCTGCCTGAGGCTTCTGGGAGTGGTTACCGTATATAACCCTCTCTGCTGCTCTGCACAGCGACTGCGCCTCTGTCTACCTCAGTCCTCAGACCAAACCACAAAACCTCTCACCATGGCTCAACAACCAATCAGCCTTCCTGCCAAGCTTATCAATGGTGGAGTTGCTGGACTGGTGGGTGTCACCTGTGTGTTCCCTATAGATCTTGCCAAGACAAGACTCCAGAACCAAAGAGGAAGCCAACAGGTTTACAAAAACATgaTGGACTGTCTGATTAAGACTGTTCGGTCTGAAGGATACTTTGGAATGTACAGAGGTGCTGCAGTCAACCTGACACTAGTGACTCCTGAGAAGGCCATCAAACTGGCAGCCAACGATTTCTTCCGTCAGCGGCTCAGTCGGGGAGAACTCAAGCTGAGCGTGTTTCAGGAAATGTTGGCTGGCTGCGGAGCAGGGATGTGTCAGGTCATTGTCACAACCCCCATGGAAATGCTTAAGATCCAGCTTCAAGATGCGGGGCGACTTGTGGCCCAGCAGAGGAAGTTACCTGTACTCCACACTGTGAAACTTGGGACAGCCAGTCCGGTCCTGAACTGTTCGTACAATGTGGGTCCTGTGTCTTCGATCAGGAAAGTGTCAGCCATTCAGATCACACAGGAACTGCTTCGCACAAAGGGCATCCAAGGACTTTACAAAGGACTAGGAGCAACCCTTATGAGGGACATCCCTTTCTCTGTGGTTTACTTCCCACTGTTTGCCCACATCAACAAGCTGGGCAAGACATCTGAGAATGATGATGTGCCTTTTTACTGGTCTTTTATTTCGGGCTGTGTGGCTGGATGTATAGCGGCTGTGGCAGTCAGTCCTTGTGACGTCGTGAAAACCCGGCTGCAGTCACTCAATAAAAGTGCAAACGAAGACACCTACAATGGCGTTGTGGATTGCATCAGAAAGATAATGCGCAAAGAAGGCCCGGCTGCTTTTCTGAAGGGTGCCGGCTGCAGGGCGCTGGTCATTGCTCCGCTCTTCGGAATCGCTCAAGTGGTTTACTTCATCGGCGTTGGGGAGTTTCTCTTGGGACAAACCCCATTCAACCTTTACTCTGTCTAAGCTGTGAAAACAACcaaattaaactttaaagaCCAGCGCAGCTATGATGCGACTAATTATCTGAGAACAAACCAAACAATTTGTATGAGAAGGCAAAATCGTTCAAATCTGCGCCGTACAAAAACATATATCTAGCATTACAGGTTAacgttatttttctttttaagtttaaatgtttctataaCGACCAAGTTATGGGACATCATACACTcagaaaaggtacaaaagctgtcacggGATAGTACTTTTTCAAATGTACCAATAAGTATTAATTTTGAAAGTACTACCATTCACTTTTCTCCGTGAGGGCACAATTTTGCCATCTTACACAAACTATTATGTGTCGTATAATTGTTAGAGTTGAAACAAATGGTTGCTGGAGAAGACTGTCAAAGGCTTGGAGTTTAACTTCCTGTCTTTACATGCTAACGGTAGCATATTCGACTGGCTTATTCAGGAAGCTATATCATTGcacatgtttctttttcttttgaaaatgtatggtCAGAGAGGTCAGATTTATCCTCAGTGAGGATTGATTTGAAAGCGTACGGCCATGACTCGTGCATTCAAGGGCCAGAAAATTGtgtcatatcttttttttttttacatgtcatCCATTAACAGTTCTGTCCTACCTTTCTTGTGACGTTTTGCACATGCACAGTATAAAGGAGGCACTGCTGATTAATGTGGACATTAGCATGGAGACATACCTATGAGGACATTGttatacaatatacataactctaaagagacacacacacagagacaggatGTTTGATTCCTGCTGAAGTGAGGCTTTGCTTTTACAGAATTAAACAACATTCTGTTCAACCTAA

Function

NR:

description
PREDICTED: mitochondrial glutamate carrier 1-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224368.1 True 1957 mRNA 0.45 9 3497006 3500981

Neighbor

gene id symbol gene type direction distance location
LOC122328605 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding upstream 110 3494137 ~ 3496896 (+)
zgc:101663 LOC107709235,LOC107697032,LOC107566074,LOC107746337,LOC107554219,LOC107673483 coding upstream 5384 3483012 ~ 3491622 (+)
ap4b1 ap4b1,LOC107697033,LOC107672998,LOC107566065 coding upstream 14145 3474016 ~ 3482861 (+)
taf11 taf11,LOC107554211,LOC107566076,LOC107696971 coding upstream 63402 3431323 ~ 3433604 (+)
LOC122328845 LOC107554212,LOC107697038,LOC107571185,LOC107673381,LOC100001805,LOC107752455 coding upstream 144672 3319441 ~ 3352334 (+)
LOC122329307 LOC107697030,LOC107711716,LOC107746331,LOC107673019,LOC100330283,LOC107598116,LOC104931868,LOC103360392 coding downstream 104275 3605256 ~ 3608341 (+)
kcna2b kcna2b,LOC107746332,LOC107711719,LOC107697029,LOC107673029,LOC107566069,LOC107598117,LOC108438074 coding downstream 127766 3628747 ~ 3631765 (+)
kcna10a kcna10a,LOC107696967,LOC107746531,LOC107559162,LOC107746341,LOC107673534,LOC107598151 coding downstream 149128 3650109 ~ 3655605 (+)
LOC122328631 LOC107696966,LOC107746508,LOC107559163 coding downstream 168216 3669197 ~ 3673592 (+)
LOC122329176 LOC107559158,LOC107746523,LOC107559166,LOC107696944,LOC107696945 coding downstream 190301 3691282 ~ 3693981 (+)
G154584 NA non-coding upstream 96248 3400009 ~ 3400758 (+)
G154582 NA non-coding upstream 101599 3394923 ~ 3395407 (+)
LOC122328887 NA non-coding upstream 181746 3314508 ~ 3315260 (+)
G154561 NA non-coding upstream 254284 3242215 ~ 3242722 (+)
G154517 NA non-coding upstream 290318 3206482 ~ 3206688 (+)
G154647 NA non-coding downstream 99461 3600442 ~ 3600856 (+)
LOC122329308 NA non-coding downstream 107382 3608363 ~ 3614844 (+)
G154661 NA non-coding downstream 133783 3634764 ~ 3636277 (+)
G154667 NA non-coding downstream 138882 3639863 ~ 3640681 (+)
G154673 NA non-coding downstream 156118 3657099 ~ 3657405 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 399971 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 486989 2995169 ~ 3010017 (+)
G154424 NA other upstream 540281 2923382 ~ 2956725 (+)
LOC122329169 NA other upstream 553200 2925308 ~ 2943806 (+)
prdm5 prdm5,LOC107698519,LOC107669703 other upstream 1140279 2312722 ~ 2356727 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other downstream 193671 3694652 ~ 3697022 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 1316384 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 3091621 6592602 ~ 6598532 (+)
G155561 NA other downstream 3725013 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 3797379 7298360 ~ 7305534 (+)

Expression


Co-expression Network