G154582


Basic Information

Item Value
gene id G154582
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3394923 ~ 3395407 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228908
CTTCATCCTTCAGCTGTTGTGATCTCCTCGGCTAAGCGCTAAGAGCTTTCTAAGCGTGTGCCAACTGCCAGCGGCGTTTATTAAAAGAGGGAAGGGACGTCTAAAACACACAACATGATTTTGCACTTAGGGTGAAGCTTTCATCTCCAAAGCGCTAAGGCTGATTTCCTGCAGGGTAACTGACAGGTGCTGAGCGCAGGCGACATAGCAATGGAGGTGGCAGCTGAGGTCTCTGAAGCTTGGCGAGGGACGAGAAAGGCAAGGAGATGAGGAGAGACGCTTCTGAACACAAGTTAATGTAAATTACACTGACGTTTATCACGCTTAATATTATAAAAGCGTAACcatgttaaaacattttgcatcgTTC

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0031497 chromatin assembly biological_process
GO:0048468 cell development biological_process
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0022607 cellular component assembly biological_process
GO:0006333 chromatin assembly or disassembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0006334 nucleosome assembly biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0065004 protein-DNA complex assembly biological_process
GO:0034728 nucleosome organization biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0071103 DNA conformation change biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0051276 chromosome organization biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228908 True 370 lncRNA 0.46 2 3394923 3395407

Neighbor

gene id symbol gene type direction distance location
LOC122328845 LOC107554212,LOC107697038,LOC107571185,LOC107673381,LOC100001805,LOC107752455 coding upstream 42589 3319441 ~ 3352334 (+)
twist3 twist3,LOC107696972,LOC107748453,LOC107554215,LOC107576512,LOC107704622,LOC107709223 coding upstream 256945 3133531 ~ 3137978 (+)
rhoac rhoac,LOC107687289,LOC107558917,LOC105890655,LOC108438067,LOC102777028,LOC106572042 coding upstream 401568 2989515 ~ 2993355 (+)
LOC122328866 LOC107709226,LOC107576631 coding upstream 405907 2983338 ~ 2989016 (+)
LOC122328851 LOC107687290,LOC107709248,LOC107558915 coding upstream 418077 2965600 ~ 2976846 (+)
taf11 taf11,LOC107554211,LOC107566076,LOC107696971 coding downstream 35916 3431323 ~ 3433604 (+)
ap4b1 ap4b1,LOC107697033,LOC107672998,LOC107566065 coding downstream 78609 3474016 ~ 3482861 (+)
zgc:101663 LOC107709235,LOC107697032,LOC107566074,LOC107746337,LOC107554219,LOC107673483 coding downstream 87605 3483012 ~ 3491622 (+)
LOC122328605 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding downstream 98730 3494137 ~ 3496896 (+)
slc25a55b zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507 coding downstream 101599 3497006 ~ 3500981 (+)
LOC122328887 NA non-coding upstream 79663 3314508 ~ 3315260 (+)
G154561 NA non-coding upstream 152201 3242215 ~ 3242722 (+)
G154517 NA non-coding upstream 188235 3206482 ~ 3206688 (+)
G154487 tmem106c,LOC107704621 non-coding upstream 281752 3112522 ~ 3113171 (+)
LOC122328883 NA non-coding upstream 343647 3049398 ~ 3051276 (+)
G154584 NA non-coding downstream 4602 3400009 ~ 3400758 (+)
G154647 NA non-coding downstream 205035 3600442 ~ 3600856 (+)
LOC122329308 NA non-coding downstream 212956 3608363 ~ 3614844 (+)
G154661 NA non-coding downstream 239357 3634764 ~ 3636277 (+)
G154667 NA non-coding downstream 244456 3639863 ~ 3640681 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 297888 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 384906 2995169 ~ 3010017 (+)
G154424 NA other upstream 438198 2923382 ~ 2956725 (+)
LOC122329169 NA other upstream 451117 2925308 ~ 2943806 (+)
prdm5 prdm5,LOC107698519,LOC107669703 other upstream 1038196 2312722 ~ 2356727 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other downstream 299245 3694652 ~ 3697022 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 1421958 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 3197195 6592602 ~ 6598532 (+)
G155561 NA other downstream 3830587 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 3902953 7298360 ~ 7305534 (+)

Expression


Co-expression Network