LOC122328429 (xkr7,LOC107551551,LOC107666518,LOC107681407,LOC107559858,LOC107705685,LOC107727032,LOC108435212)


Basic Information

Item Value
gene id LOC122328429
gene name xkr7,LOC107551551,LOC107666518,LOC107681407,LOC107559858,LOC107705685,LOC107727032,LOC108435212
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 6871977 ~ 6926416 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224119.1
CATGAgctttcacacactctctccagcACACACATCCCCCTCCCCTCTCATTGTACTTCGCTTTCCTTTGCCCACTCTCTTTCTACAACAAACATGGCCGCTAAATCGGATGGAGCAGCCGTGTGTGAGAGCGCTTCTCGGTGTCTGCTTGGCCCTGAGCAGAGCGCGGCTCCTCTGCACCCTCGCGCCGAGAAGCGCTTCTCGCTGCTGGACTGCTGCTGGGTGCTGTGCGCCCTCTTGGTCTTCTTCTCCGACGGAGCCACCGACCTGTGGCTGGCAGCGGACTACTACGTGAGGCAGGACTATTGGTGGTTCGGGCTCACGTTAGTGTTCGTGGTGGTTCCCTCCGCGGTGGTTCAGGTGTTAAGTTTCAGGTGGTTCGTGTATGATTACTCGGAGATGAGCGCCTCCCCGAGCGGGGACGGATGCGATTTCAGCACCAAGGACAGCGACCGGAGGAGCGGCAGCGGCAGAACCCTGCCTGCGAACGGATCGCGGAAATGCTGCAGAGTGCTCGTGTGGCTCTTCCAGTCCATCATCCACATCTTGCAGCTCGGCCAGGTCTGGAGGTACGTCCACACCTTGTACCTGGGAGTGCAAAGCCGCTGGCATGGCGGCCCGGGTCAGAGGCACTTCTACTGGCGTCTGATGTTCGAGAGCGCTGACATCAACATGCTGCGGCTGCTGGAGGCTTTCCTGAAGAGCGCGCCCCAGCTCGTGTTGCAGCTCAGCATCATGATCCACAGCAACGACATACTGCCCCTACAGGGTCTTTCCGCATCTGCCTCATTGGTTTCTCTCGCCTGGATGATCGCATCCTACCAGAAGGTTCTGCGTGACTCTCGTGACGACAAGCTCCCCATGTCCTACAAGGCCGTGATTGTTCAGATGCTCTGGCACCTCTTTACCATCGGTGCTCGAACCATCGCCTTCGCCCTCTTCGCTTCAGTCTTCCAGCTTTACTTCGGGATCTTCATCGTGGCCCACTGGTGCGCCATGACCTTCTGGATCATCCAGGGCGAGACCGACTTCTGCATGTCCAAGTGGGAGGAGATCATCTACAACATGGTGGTGGGCATCATCTACATCTTTTGCTGGTTCAATGTCAAAGAAGGCCGTGCCCGCTTTCGGCTTGGTGTGTACTACTGCGTGACCTTGGTTGAGAACGTCGCTCTCACCGTCGCTTGGTATATTCACAGGGGACCTCATACCTCGGACTTCTATGCCCTgattattgtgtgtgtggtggtgtgTAGCTATGCTTTGGGAACATTCTTTATGTTCGTCTATTATTGCCTGCTCCACCCAGACGGACCTATCCTGGGAGCTCAGTGGAGCTGTGTTGAGGAGGGAATGGGGGTAATCGGTCTGGGAGGCGTTGGGGATTTGGAAACCCCTTTGCCCCAACCGGACGTGGTTACTAGCCCTCCCAGAACACTTCAAAGGACTACTGGTGGAGATCGGGAGATAGGGGCCGGGGATAGAGAGAGTTGCCTGCCGGTGTTTCAGGTTAGGCCTCCTAGTGTTCCCCCAGCTTCCTCCCCACGTCCCCCAAGAACTGAAGGTCCCGTTATCCGCATCGACCTGCCAAGAAAAAGGTACCCTGCCTGGGATGCCCACTTTATTGACCGAAGGCTGAGGAAGACCATCCTGGTGCTGGAAAATACATCTCCCGTGACGCCTCGCATCCAGTACCAGAGCTTCAGCAACCCCAAAGAAGTGACGGAGTATGAGACTACGGTGTAGTGTTGTTCATACCTCCACCTTCCACAAGACATCTCTATGCAGAGGTGGAACTCAGCCGCCATGAGGTTAAGGTCCGATCCTTGACGGTCGGCATGGTGCTACACGGTGGGACCGCGGCACATTTGGCATTCGGATGCCTGGGAGCGCATGACTGGTCCGAAAGTGCACATCAGGCTGGAAGCAAGTAACGTGGTGTTTACATGACCTGCATGGGAAGTGAAACTACGAAAGGGATTTACCTTTCTGCCTATGCACTGAACATATAAAAAATGACCATGATGAGAAGAAGTggacatttgtaaaatatagatGAACTGACCAATCAGTATTCCTCAGGACCAGCCTGGCTGCTGTATTGGTCTAAGCTTAATGTTCAGTGACCTGAAAACAGTACAAATTGTGTATTATTTGCTTCTGTGAATGGTGAGGTTAGCGAGTCCAATCATCCATTTCTTCAAAAGAGTTCTTCTGTAATTattgacttatttatttattagatttattttttatgactCTGTGGCCATGTCTTTGATATAATTCTTCTAATCGAATATTCATAAATAGATATTATCTTTTGTTATATGTATCTACAATAGAATGGTGCCAGTGTGTTGGTATGAATGTTTTTTGGGTTGTCTGGTCATGCTGCATTGTTTATCTgtaaagataaagaaaaaatgtcatATAGTAAGACAAAAAGCTGTGATCTAATGTAGTTGGATgaaaataatactgtaaaaaaaaaaaagattcagatGACAGCCTcggaaaagtaaaaaaaaaatttgaaaatgtctgtTTGAGTGTTTCATGACAATGGTTTTGGGAGCATCTTGGAACATAAAACTTGCAAACGTC

Function

symbol description
xkr7 Predicted to be involved in apoptotic process involved in development; engulfment of apoptotic cell; and phosphatidylserine exposure on apoptotic cell surface. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human XKR7 (XK related 7).

NR:

description
PREDICTED: XK-related protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224119.1 True 2604 mRNA 0.51 3 6871977 6926416

Neighbor

gene id symbol gene type direction distance location
cables2b cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996 coding downstream 14512 6838807 ~ 6857465 (-)
acss2 acss2,LOC107681393,LOC107551550,LOC107666475,LOC107559859 coding downstream 52134 6805369 ~ 6819843 (-)
osbpl2b osbpl2,osbpl2b,LOC107727008,LOC107681391,LOC107666451,LOC107705692 coding downstream 150407 6713359 ~ 6721570 (-)
adrm1 adrm1,LOC107727009,LOC103354471,LOC108276396 coding downstream 158770 6708712 ~ 6713207 (-)
slc16a7 slc16a7,LOC107559865,LOC107705697,LOC107666398,LOC108429289 coding downstream 269894 6598718 ~ 6602083 (-)
LOC122328474 LOC107551551,LOC107666518,LOC107727032,LOC107705685,LOC107681407,LOC107559858 coding upstream 82481 7008897 ~ 7060251 (-)
sox18 sox18,LOC107727030,LOC107681403,LOC107705673,LOC107551552,LOC107666636,LOC107579252 coding upstream 161761 7088177 ~ 7091244 (-)
rgs19 rgs19,LOC107727031,LOC107666537,LOC107681401,LOC107551553,LOC107705684 coding upstream 384154 7310570 ~ 7342699 (-)
npbwr2b npbwr2,LOC107558229,LOC107727007,LOC571123,LOC107559472,LOC107705671,LOC108410549,LOC107666655 coding upstream 595648 7522064 ~ 7525501 (-)
kif3b kif3b,LOC107690851,LOC107558233,LOC107559485,LOC107681362 coding upstream 847885 7774301 ~ 7782717 (-)
G155578 NA non-coding downstream 33411 6837129 ~ 6838566 (-)
G155508 NA non-coding downstream 36388 6835375 ~ 6835589 (-)
LOC122328996 NA non-coding downstream 67058 6794103 ~ 6804919 (-)
G155443 NA non-coding downstream 246709 6624419 ~ 6625268 (-)
G155435 NA non-coding downstream 259453 6611993 ~ 6612524 (-)
G155586 NA non-coding upstream 3270 6929686 ~ 7067824 (-)
G155597 NA non-coding upstream 173892 7100308 ~ 7106154 (-)
G155605 NA non-coding upstream 193987 7120403 ~ 7301136 (-)
G155606 NA non-coding upstream 196513 7122929 ~ 7124586 (-)
G155607 NA non-coding upstream 198412 7124828 ~ 7305564 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other downstream 4677 6858007 ~ 6867300 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other downstream 48945 6766608 ~ 6823032 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other downstream 140091 6730851 ~ 6731886 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other downstream 1375503 5484212 ~ 5496474 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other downstream 1392155 5477841 ~ 5479822 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other upstream 38326 6964742 ~ 6981961 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other upstream 67751 6994167 ~ 7003523 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other upstream 350032 7276448 ~ 7278323 (-)
G155807 NA other upstream 1618978 8545394 ~ 8551977 (-)
G155827 NA other upstream 1699342 8625758 ~ 8628391 (-)

Expression


Co-expression Network