LOC122328759 (cox4i2,LOC107737631,LOC107672030,LOC107560926,LOC107741330)


Basic Information

Item Value
gene id LOC122328759
gene name cox4i2,LOC107737631,LOC107672030,LOC107560926,LOC107741330
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11441897 ~ 11444744 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224669.1
CCACCCTGTGTTTTCATGGTCAGTTGCTGCCAACAGCCCAAGAAGGCTATGCTGCACTTGACAGCAGGACGTGTAGTGGGGCTTCTGTCCAGACGGGGAGTAGCTGCTTTCAGCTCCAGCGCGGTCAAGATGGCCAGTCACgGTGGGGTGACCGAACAGACGGACATGTCTTTACCCCTGTACTGGGACCGTCTGGACACTCCTCTGCCTGACAGACCATACAAAGATACCCTCAGCGCTGCAGACAAGAGCctgaaggagaaggagaagggcCCCTGGAACAGCCTTTCCAAAGAGGAGAAGCTTGCTTTGTACAGAATTATGTTTAACGAGACGTACGCTGAGATGAAGAAACCAACTGGTGAGTGGAAGACGGTCTTTGGTGGCATCTTTTTCTTCATTGGGTTTACTGGCCTGGTTGTTCTCTGGCAAACGTACTACGtataTCCCCCTCACCCTCGTACCCTGGATGACGAATGGCAGGCTATGCAGGTGAAGCGGATGCTGGACATGCGGGTGAACCCCGTGGAGGGTTTTTCAGCCAAATGGGACTATGAGAAGGGCCAGTGGAAATAGATGAATAGAAATGCAGCTGTGAGCAAAAGATCAAAGCCTTGCTACTTATCTGCCGTTCTCCTTTGGCAGTCTTCATGCATTACTATGCCCTCCTTTTGTGAACATTTGAATATTATCCAGTGGGCAACCATGTTAAAATCTGAAGAAGTGAGGAAAATGAATTCATAACACTGAATGAATCGCAAGTGTTTCCTCTTCACTGGCGGAAGTAAAACTTGAGAGAAATTA
>XM_043224670.1
CTATTTAGCCTAATTCATTACATACCTTCATATCAATGCTAACCGACATTATTCAGATGATTTATTCTTACGCAGTTTAACTCGGACTTTTCCTCGAatttagcaaattaaaaaaattataacATGCTGCACTTGACAGCAGGACGTGTAGTGGGGCTTCTGTCCAGACGGGGAGTAGCTGCTTTCAGCTCCAGCGCGGTCAAGATGGCCAGTCACgGTGGGGTGACCGAACAGACGGACATGTCTTTACCCCTGTACTGGGACCGTCTGGACACTCCTCTGCCTGACAGACCATACAAAGATACCCTCAGCGCTGCAGACAAGAGCctgaaggagaaggagaagggcCCCTGGAACAGCCTTTCCAAAGAGGAGAAGCTTGCTTTGTACAGAATTATGTTTAACGAGACGTACGCTGAGATGAAGAAACCAACTGGTGAGTGGAAGACGGTCTTTGGTGGCATCTTTTTCTTCATTGGGTTTACTGGCCTGGTTGTTCTCTGGCAAACGTACTACGtataTCCCCCTCACCCTCGTACCCTGGATGACGAATGGCAGGCTATGCAGGTGAAGCGGATGCTGGACATGCGGGTGAACCCCGTGGAGGGTTTTTCAGCCAAATGGGACTATGAGAAGGGCCAGTGGAAATAGATGAATAGAAATGCAGCTGTGAGCAAAAGATCAAAGCCTTGCTACTTATCTGCCGTTCTCCTTTGGCAGTCTTCATGCATTACTATGCCCTCCTTTTGTGAACATTTGAATATTATCCAGTGGGCAACCATGTTAAAATCTGAAGAAGTGAGGAAAATGAATTCATAACACTGAATGAATCGCAAGTGTTTCCTCTTCACTGGCGGAAGTAAAACTTGAGAGAAATTA
>XM_043224671.1
ACtggccctctctctctctctctctccttcatttCTCCACCCACCCTGTGTTTTCATGGTCAGTTGCTGCCAACAGCCCAAATGCTGCACTTGACAGCAGGACGTGTAGTGGGGCTTCTGTCCAGACGGGGAGTAGCTGCTTTCAGCTCCAGCGCGGTCAAGATGGCCAGTCACgGTGGGGTGACCGAACAGACGGACATGTCTTTACCCCTGTACTGGGACCGTCTGGACACTCCTCTGCCTGACAGACCATACAAAGATACCCTCAGCGCTGCAGACAAGAGCctgaaggagaaggagaagggcCCCTGGAACAGCCTTTCCAAAGAGGAGAAGCTTGCTTTGTACAGAATTATGTTTAACGAGACGTACGCTGAGATGAAGAAACCAACTGGTGAGTGGAAGACGGTCTTTGGTGGCATCTTTTTCTTCATTGGGTTTACTGGCCTGGTTGTTCTCTGGCAAACGTACTACGtataTCCCCCTCACCCTCGTACCCTGGATGACGAATGGCAGGCTATGCAGGTGAAGCGGATGCTGGACATGCGGGTGAACCCCGTGGAGGGTTTTTCAGCCAAATGGGACTATGAGAAGGGCCAGTGGAAATAGATGAATAGAAATGCAGCTGTGAGCAAAAGATCAAAGCCTTGCTACTTATCTGCCGTTCTCCTTTGGCAGTCTTCATGCATTACTATGCCCTCCTTTTGTGAACATTTGAATATTATCCAGTGGGCAACCATGTTAAAATCTGAAGAAGTGAGGAAAATGAATTCATAACACTGAATGAATCGCAAGTGTTTCCTCTTCACTGGCGGAAGTAAAACTTGAGAGAAATTA

Function

symbol description
cox4i2 Predicted to enable cytochrome-c oxidase activity. Predicted to be involved in mitochondrial electron transport, cytochrome c to oxygen. Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex IV. Is expressed in several structures, including gill; heart; liver; nervous system; and neural plate. Orthologous to human COX4I2 (cytochrome c oxidase subunit 4I2).

NR:

description
PREDICTED: cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224669.1 False 804 mRNA 0.49 6 11441937 11444744
XM_043224670.1 True 879 mRNA 0.46 5 11443293 11444744
XM_043224671.1 False 837 mRNA 0.49 5 11441897 11444744

Neighbor

gene id symbol gene type direction distance location
emp3b emp3b,LOC107562456,LOC107671979,LOC107741326,LOC107737636,LOC107657024,LOC107560919 coding upstream 51611 11387916 ~ 11390286 (+)
myh7bb myh7bb,myh7b,LOC107672010,LOC107737633,LOC107657025,LOC107741323,LOC107562469 coding upstream 63881 11361882 ~ 11378016 (+)
avpr2ab avpr2ab,LOC107672000,LOC107737642,LOC107657032,LOC107562472,LOC107741337 coding upstream 139964 11285331 ~ 11301933 (+)
LOC122328405 idh3g,LOC107671940,LOC108436344,LOC107560866,LOC108275983,LOC108276129,LOC108425561,LOC107593912,LOC107716150 coding upstream 173356 11263398 ~ 11268541 (+)
LOC122329091 LOC107560879,LOC107741317,LOC107657035,LOC107671941,LOC108436304 coding upstream 273439 11164642 ~ 11168458 (+)
fkbpl LOC107672039,LOC107562454,LOC107657000,LOC107712683,LOC107560883 coding downstream 63224 11507968 ~ 11510961 (+)
trnan-guu_35 NA coding downstream 67881 11512625 ~ 11512698 (+)
trnan-guu_36 NA coding downstream 69029 11513773 ~ 11513846 (+)
trnaf-gaa_120 NA coding downstream 71055 11515799 ~ 11515871 (+)
trnae-uuc_33 NA coding downstream 73721 11518465 ~ 11518536 (+)
G156633 NA non-coding upstream 108970 11331742 ~ 11332927 (+)
G156592 NA non-coding upstream 128294 11219035 ~ 11313603 (+)
G156599 NA non-coding upstream 130410 11245551 ~ 11311487 (+)
G156590 NA non-coding upstream 198861 11211041 ~ 11243036 (+)
G156568 NA non-coding upstream 289850 11148863 ~ 11152047 (+)
G156681 NA non-coding downstream 87891 11532635 ~ 11533198 (+)
G156682 NA non-coding downstream 89846 11534590 ~ 11534917 (+)
G156684 NA non-coding downstream 94871 11539615 ~ 11540315 (+)
G156685 NA non-coding downstream 95896 11540640 ~ 11555919 (+)
G156690 fam208ab,LOC107737622,LOC107712737,LOC107570279 non-coding downstream 169386 11614130 ~ 11651107 (+)
G156586 NA other upstream 264864 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 356293 11077154 ~ 11085604 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 517909 10913904 ~ 10923988 (+)
G156414 LOC107707743,LOC107747988,LOC107671949,LOC107559475 other upstream 741002 10698798 ~ 10700895 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other upstream 869651 10563344 ~ 10572246 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other downstream 252670 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other downstream 286236 11730980 ~ 11732361 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other downstream 801449 12246193 ~ 12251982 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 2649334 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 2854957 14299701 ~ 14343274 (+)

Expression


Co-expression Network