G16001


Basic Information

Item Value
gene id G16001
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5653796 ~ 5654020 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17897
TTTCTATTATAGCTCTACCATGAGATATAGTATGTTTTTCTCAATCGCTAAAACACTTTTTTTTTTTAAAACCTTCCAGTGAAAAATAGGCTTACTCTGGCATGAATTCACATGTTTGTCAGCAAAGTGCTACTTTGCTGATGATGGACATGTTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTTATTACTCACTCTCATGTCGTTCTACACCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17897 True 225 lncRNA 0.38 1 5653796 5654020

Neighbor

gene id symbol gene type direction distance location
CI01000001_05587090_05591952 APOBEC2B, APOBEC2 coding upstream 61658 5587090 ~ 5592138 (+)
CI01000001_05581818_05584137 NA coding upstream 69175 5581818 ~ 5584621 (+)
CI01000001_05579315_05580553 CCDC115 coding upstream 73093 5579315 ~ 5580703 (+)
CI01000001_05565644_05568075 NA coding upstream 85308 5565644 ~ 5568488 (+)
CI01000001_05498507_05500723 NA coding upstream 152680 5498210 ~ 5501377 (+)
CI01000001_05689002_05702184 NA coding downstream 34635 5688655 ~ 5702684 (+)
CI01000001_05734513_05735964 NA coding downstream 79101 5733121 ~ 5736013 (+)
CI01000001_05795264_05798555 ATP6AP1LB coding downstream 141244 5795264 ~ 5799834 (+)
CI01000001_05803416_05809184 SLMAPB coding downstream 149396 5803416 ~ 5809306 (+)
CI01000001_05814686_05836203 NA coding downstream 160626 5814646 ~ 5837238 (+)
G15999 NA non-coding upstream 6332 5647234 ~ 5647464 (+)
G15998 NA non-coding upstream 7581 5645946 ~ 5646215 (+)
G15993 NA non-coding upstream 23708 5629854 ~ 5630088 (+)
G15991 NA non-coding upstream 26945 5626607 ~ 5626851 (+)
G15987 NA non-coding upstream 40014 5612334 ~ 5613782 (+)
G16002 NA non-coding downstream 14334 5668354 ~ 5668695 (+)
G16003 NA non-coding downstream 16914 5670934 ~ 5671226 (+)
G16005 NA non-coding downstream 22060 5676080 ~ 5676312 (+)
G16007 NA non-coding downstream 23483 5677503 ~ 5677712 (+)
G16008 NA non-coding downstream 23900 5677920 ~ 5678268 (+)
CI01000001_05279884_05287123 NA other upstream 363840 5279837 ~ 5287698 (+)
G15794 NA other upstream 589092 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2032345 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3982792 1667762 ~ 1671167 (+)
G13051 NA other upstream 4608644 1043713 ~ 1045152 (+)
G15995 NA other downstream 57865 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 1878552 7531541 ~ 7540586 (+)
G17234 NA other downstream 2378104 8032124 ~ 8032483 (+)
G17353 NA other downstream 3562002 9216022 ~ 9228859 (+)
G17354 NA other downstream 3580443 9234463 ~ 9240677 (+)

Expression


Co-expression Network