G16005


Basic Information

Item Value
gene id G16005
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5676080 ~ 5676312 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17901
AAAATATATTGGTAGAATATTGGTTACTGGATGATATTAGATATTTAAAATCATCTGTTTAGCTGTTTTATGCTAATTTTCTCTATTTTTTATCTAATGCTCACTTAAAGTTAATCTTTAAAAAACATTATAATTTAATAACACTTAAAATGTAATCTTTAGCAAATAATTATCAGCCTATCGACATCAGCCAGATTGTTTCATATCAGTACAAATCTATCAGTACTAATCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17901 True 233 lncRNA 0.25 1 5676080 5676312

Neighbor

gene id symbol gene type direction distance location
CI01000001_05587090_05591952 APOBEC2B, APOBEC2 coding upstream 83942 5587090 ~ 5592138 (+)
CI01000001_05581818_05584137 NA coding upstream 91459 5581818 ~ 5584621 (+)
CI01000001_05579315_05580553 CCDC115 coding upstream 95377 5579315 ~ 5580703 (+)
CI01000001_05565644_05568075 NA coding upstream 107592 5565644 ~ 5568488 (+)
CI01000001_05498507_05500723 NA coding upstream 174964 5498210 ~ 5501377 (+)
CI01000001_05689002_05702184 NA coding downstream 12343 5688655 ~ 5702684 (+)
CI01000001_05734513_05735964 NA coding downstream 56809 5733121 ~ 5736013 (+)
CI01000001_05795264_05798555 ATP6AP1LB coding downstream 118952 5795264 ~ 5799834 (+)
CI01000001_05803416_05809184 SLMAPB coding downstream 127104 5803416 ~ 5809306 (+)
CI01000001_05814686_05836203 NA coding downstream 138334 5814646 ~ 5837238 (+)
G16003 NA non-coding upstream 4854 5670934 ~ 5671226 (+)
G16002 NA non-coding upstream 7385 5668354 ~ 5668695 (+)
G16001 NA non-coding upstream 22060 5653796 ~ 5654020 (+)
G15999 NA non-coding upstream 28616 5647234 ~ 5647464 (+)
G15998 NA non-coding upstream 29865 5645946 ~ 5646215 (+)
G16007 NA non-coding downstream 1191 5677503 ~ 5677712 (+)
G16008 NA non-coding downstream 1608 5677920 ~ 5678268 (+)
G16009 NA non-coding downstream 2947 5679259 ~ 5679681 (+)
G16010 NA non-coding downstream 4608 5680920 ~ 5681257 (+)
G16011 NA non-coding downstream 5327 5681639 ~ 5681986 (+)
CI01000001_05279884_05287123 NA other upstream 386124 5279837 ~ 5287698 (+)
G15794 NA other upstream 611376 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2054629 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4005076 1667762 ~ 1671167 (+)
G13051 NA other upstream 4630928 1043713 ~ 1045152 (+)
G15995 NA other downstream 35573 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 1856260 7531541 ~ 7540586 (+)
G17234 NA other downstream 2355812 8032124 ~ 8032483 (+)
G17353 NA other downstream 3539710 9216022 ~ 9228859 (+)
G17354 NA other downstream 3558151 9234463 ~ 9240677 (+)

Expression


Co-expression Network