G16011


Basic Information

Item Value
gene id G16011
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5681639 ~ 5681986 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17907
CAGGAATGGTTTGAGGAACATGATGAGTTTAAGGTGTTGCCTTTGCCTCCAAATTCCTCAGATCTCAATCCAATTGTGCATCTATGGGATGTGTTGGACCAGAGGACTTGTGGAGTCCATGCCTCGACGCATTAGAGCTGTTTTGGCAGCACAAGAGGGACCTTCACAATATTAGTCAGGTGGTTTTAATGTTTTCTTAATACAACACTAAAATAAATGTTTTCTGTGCAACATTTATAGACGCTGCCTTGCCATTACTTAATTTTTTTTTTTTCCACACTGGCCTATTATTATGGTATAATTCATTTCACATAACCCTGCTCCTAAATAGCATGTAAACGCGCATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17907 True 348 lncRNA 0.44 1 5681639 5681986

Neighbor

gene id symbol gene type direction distance location
CI01000001_05587090_05591952 APOBEC2B, APOBEC2 coding upstream 89501 5587090 ~ 5592138 (+)
CI01000001_05581818_05584137 NA coding upstream 97018 5581818 ~ 5584621 (+)
CI01000001_05579315_05580553 CCDC115 coding upstream 100936 5579315 ~ 5580703 (+)
CI01000001_05565644_05568075 NA coding upstream 113151 5565644 ~ 5568488 (+)
CI01000001_05498507_05500723 NA coding upstream 180523 5498210 ~ 5501377 (+)
CI01000001_05689002_05702184 NA coding downstream 6669 5688655 ~ 5702684 (+)
CI01000001_05734513_05735964 NA coding downstream 51135 5733121 ~ 5736013 (+)
CI01000001_05795264_05798555 ATP6AP1LB coding downstream 113278 5795264 ~ 5799834 (+)
CI01000001_05803416_05809184 SLMAPB coding downstream 121430 5803416 ~ 5809306 (+)
CI01000001_05814686_05836203 NA coding downstream 132660 5814646 ~ 5837238 (+)
G16010 NA non-coding upstream 382 5680920 ~ 5681257 (+)
G16009 NA non-coding upstream 1958 5679259 ~ 5679681 (+)
G16008 NA non-coding upstream 3371 5677920 ~ 5678268 (+)
G16007 NA non-coding upstream 3927 5677503 ~ 5677712 (+)
G16005 NA non-coding upstream 5327 5676080 ~ 5676312 (+)
G16012 NA non-coding downstream 300 5682286 ~ 5682520 (+)
G16013 NA non-coding downstream 962 5682948 ~ 5683159 (+)
G16014 NA non-coding downstream 1256 5683242 ~ 5683465 (+)
G16015 NA non-coding downstream 1952 5683938 ~ 5684139 (+)
G16016 NA non-coding downstream 3617 5685603 ~ 5685945 (+)
CI01000001_05279884_05287123 NA other upstream 391683 5279837 ~ 5287698 (+)
G15794 NA other upstream 616935 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2060188 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4010635 1667762 ~ 1671167 (+)
G13051 NA other upstream 4636487 1043713 ~ 1045152 (+)
G15995 NA other downstream 29899 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 1850586 7531541 ~ 7540586 (+)
G17234 NA other downstream 2350138 8032124 ~ 8032483 (+)
G17353 NA other downstream 3534036 9216022 ~ 9228859 (+)
G17354 NA other downstream 3552477 9234463 ~ 9240677 (+)

Expression


Co-expression Network