G16010


Basic Information

Item Value
gene id G16010
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5680920 ~ 5681257 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17906
GATTGAATCACATTTTCTTTTAGATCAGGTGGATGGCCAGGTGCATGTGTCATTTACATGGGGAAAAGATGGCATCAGGATGCATTATGAAAAGAAGGCAGGCCGACAGAAGCAGTGTGTTGCTCTAGGCAATGTCTTGCTGGGAAACCTTGGGTCCTGGCATTCATGTGGATGTTATTTTGACATGTACCACCAACCTAAAGATTGTTGCAGACCATGTACACTAGAGGTCTGCGCAGGATGGATTTTTAAGTCCTGCTCCCACAAGATTGTCTACTGCTCCCACCAAAAATGTTAGATTTTATCCCGCTCCAGCCCAAAACTTTCATATTTTGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17906 True 338 lncRNA 0.44 1 5680920 5681257

Neighbor

gene id symbol gene type direction distance location
CI01000001_05587090_05591952 APOBEC2B, APOBEC2 coding upstream 88782 5587090 ~ 5592138 (+)
CI01000001_05581818_05584137 NA coding upstream 96299 5581818 ~ 5584621 (+)
CI01000001_05579315_05580553 CCDC115 coding upstream 100217 5579315 ~ 5580703 (+)
CI01000001_05565644_05568075 NA coding upstream 112432 5565644 ~ 5568488 (+)
CI01000001_05498507_05500723 NA coding upstream 179804 5498210 ~ 5501377 (+)
CI01000001_05689002_05702184 NA coding downstream 7398 5688655 ~ 5702684 (+)
CI01000001_05734513_05735964 NA coding downstream 51864 5733121 ~ 5736013 (+)
CI01000001_05795264_05798555 ATP6AP1LB coding downstream 114007 5795264 ~ 5799834 (+)
CI01000001_05803416_05809184 SLMAPB coding downstream 122159 5803416 ~ 5809306 (+)
CI01000001_05814686_05836203 NA coding downstream 133389 5814646 ~ 5837238 (+)
G16009 NA non-coding upstream 1239 5679259 ~ 5679681 (+)
G16008 NA non-coding upstream 2652 5677920 ~ 5678268 (+)
G16007 NA non-coding upstream 3208 5677503 ~ 5677712 (+)
G16005 NA non-coding upstream 4608 5676080 ~ 5676312 (+)
G16003 NA non-coding upstream 9694 5670934 ~ 5671226 (+)
G16011 NA non-coding downstream 382 5681639 ~ 5681986 (+)
G16012 NA non-coding downstream 1029 5682286 ~ 5682520 (+)
G16013 NA non-coding downstream 1691 5682948 ~ 5683159 (+)
G16014 NA non-coding downstream 1985 5683242 ~ 5683465 (+)
G16015 NA non-coding downstream 2681 5683938 ~ 5684139 (+)
CI01000001_05279884_05287123 NA other upstream 390964 5279837 ~ 5287698 (+)
G15794 NA other upstream 616216 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2059469 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4009916 1667762 ~ 1671167 (+)
G13051 NA other upstream 4635768 1043713 ~ 1045152 (+)
G15995 NA other downstream 30628 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 1851315 7531541 ~ 7540586 (+)
G17234 NA other downstream 2350867 8032124 ~ 8032483 (+)
G17353 NA other downstream 3534765 9216022 ~ 9228859 (+)
G17354 NA other downstream 3553206 9234463 ~ 9240677 (+)

Expression


Co-expression Network