LOC122329090 (LOC107586552,LOC107756359,LOC107701702,LOC556451,LOC108275624)


Basic Information

Item Value
gene id LOC122329090
gene name LOC107586552,LOC107756359,LOC107701702,LOC556451,LOC108275624
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9575293 ~ 9577436 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225295.1
ataagaCTAAGTGCACACATTGGCCTTCATGGGACTTACTGTGTTTCCTGTTGGACAATAAAAGATGAAATGGCATCAGAGACTGGTGAAGGATCTGTCTTACATCACACGTTAGTGAAATCGAGCTCGTGAAAGCGCCGCGCTCTGCCGTTTACTACAAAGTGTCCATTGAATACCAATACAGCACATCGGCAGAGGATCCTGCATGCTGTTTCCTGTAGGTTCTGCCTTCAGTAGACATTAAAAGGCACAATGGAGAATAAAACAATGCTCTGGCCATGCAACCTGACCGCTCCGGATTACAACCAAACCGACTGCACGTCTCCAGCGTGGATGCTCTACCCTGACTTCTACATCTGGCTGCCGGTTATTTACTCGGTCATCTGCGCTGTGGGGCTCACGGGCAACACCGCTGTCATTTACGTGATTCTGAAGGCGCCTAAAATGAAAACCGTCACCAACttgttcattttgaatttgGCCATCGCTGACGACCTTTTCACACTGGTGCTGCCCATCAATATAGCCGAGCACCTGTTAAACTACTGGCCGTTTGGAGAGATTCTATGCAAACTGATTCTGTCCGTAGATCACTACAACATCTTCTCCAGCATATTTTTCCTAACCGTGATGAGTGTGGACCGCTATCTGGTCGTGGTGTCCACGTTGCGCTCCAAACGGATGCCCCACCGGACCTACAGGTTAGCCAAAACGGTCAGCCTGAGCATCTGGGCTCTGGTCATTCTCATCGTGATGCCCTTCACCGTTTTTGCCGGCGTTTACGTGAGTCCCGACGACAAGGAGAGCCGGAAGAGCTGCGTTTTGAGTTTCCCGAGCCCTGAGAGTTTCTGGTTCAAAGCCAGTCGGATCTACACGCTGGTCATCGGTTTTGTCGTCCCGGTTTCAACCATATGCATCCTTTATAGCGTGATGCTCTACAAGCTGAGACGCACGCGCATCAACTTAAACGGAAAGGCGTTGGACAAAGCCAAGAAACGAGTCACGATGATGGTCTTCGTGGTTCTTGCCGTTTGCTTGTTTTGCTGGACACCCTTCCACCTGAGCACGGTGGTCGCCCTCACCTCAGACTTGCCCACCACTCCTCTGGTCATAGgtatatcttattttatcaCGGGACTGAGTTACGCCAATTCGTGTCTCAATCCGTTCCTGTACGCGTTCTTAGACGATAGTTTCAGGAAGGCGTTTAAGAAAATGCTGGAGTGCTGAATCAATTCCACACAAATCGACCAACGAGGTTCGATTTGAACAGCATCAAATCATAAAAGTGTTCATTTGAACTCAAAAAGGCATGGCGCACTTTAAAACAACCAGCTTGGCTCATCAAGTGTCTAATTTCATGCACTGTAAAACGTTTAGTTTCGACACAGTTTTTCTTATCAGCATTTAAATTTGAAGTGGTGCAGAAGAGTAGCCTAATGAATGTATCGCTGTTCTGTGTAGCTTTAGTACCATTTTGATTttagcacaataaaaaaatactgtatgctACGAATTTCATTAACACTCATTCATTAACAGATTTCTAAATtagctaacactttattttaaggtgtctttgttacacGTTCCATGtacttattataataacaataaacgaaaacctaatcctaacctatatagtaattacatgcatttaaaatgactcagtaatgtataattacactgtaaataaagtgaaaccaaatcttgttttaaagtgtaaatgattatttatgtaCAAAGCATGATTACTTGTGTAAATAtttgactatatttatttattatgctatGTGGTTTGGGAGTGCTTTACGTATAGGCTAAGCTTAAAAGTGAAACTCTG

Function

NR:

description
PREDICTED: neuropeptides B/W receptor type 1-like

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008188 neuropeptide receptor activity molecular_function

KEGG:

id description
K05268 NPBWR1; neuropeptides B/W receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225295.1 True 1843 mRNA 0.43 2 9575293 9577436

Neighbor

gene id symbol gene type direction distance location
asxl1 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding upstream 32068 9528724 ~ 9543225 (+)
dnajc11a dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding upstream 48835 9519025 ~ 9526458 (+)
uts2a LOC107571861,LOC107708786,LOC107656544,LOC107695762,LOC107718818 coding upstream 362434 9211386 ~ 9212859 (+)
tnfrsf9a LOC107708826,LOC107656554 coding upstream 381860 9189374 ~ 9193433 (+)
dvl1a dvl1a,LOC107708824,LOC107570850 coding upstream 388418 9156494 ~ 9186875 (+)
xkr5l zgc:198371,LOC107708814,LOC107656543,LOC107701703,LOC107756376,LOC107571628,LOC107575995 coding downstream 9639 9587075 ~ 9600168 (+)
cables2a cables2a,LOC107656547,LOC107708813,LOC107756377,LOC107571009,LOC107549038,LOC107701719 coding downstream 24492 9601928 ~ 9615496 (+)
si:ch211-197l9.2 LOC107708809,LOC107756380,LOC107656534,LOC107549068,LOC107701723 coding downstream 57658 9635094 ~ 9648469 (+)
selenoi si:ch211-197l9.4,selenoi,LOC107656545,LOC107708808,LOC107571075,LOC107549067,LOC107701725,LOC107756381 coding downstream 72461 9649897 ~ 9659485 (+)
tbx18 tbx18,LOC107708785,LOC107656541,LOC107756382,LOC107701724 coding downstream 119204 9696640 ~ 9705684 (+)
G155985 NA non-coding upstream 360839 9214140 ~ 9214454 (+)
G155984 NA non-coding upstream 361586 9213155 ~ 9213707 (+)
G155860 slc25a33,LOC107695765,LOC107708828,LOC107681985 non-coding upstream 437103 9135416 ~ 9138190 (+)
G155868 tmem201 non-coding upstream 444218 9128700 ~ 9131075 (+)
G155894 ube4b non-coding upstream 568555 9005042 ~ 9006738 (+)
G156034 NA non-coding downstream 6733 9584169 ~ 9584580 (+)
G156047 NA non-coding downstream 45043 9622479 ~ 9639826 (+)
G156096 NA non-coding downstream 225260 9802696 ~ 9808280 (+)
G156098 NA non-coding downstream 235781 9813217 ~ 9815309 (+)
G156109 NA non-coding downstream 303326 9880762 ~ 9973534 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other upstream 452900 9120884 ~ 9122393 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other upstream 473921 8941031 ~ 9101372 (+)
G155799 NA other upstream 1086652 8488086 ~ 8488641 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other upstream 1241917 8321705 ~ 8333376 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other upstream 2269759 7298360 ~ 7305534 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other downstream 106310 9683746 ~ 9769620 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other downstream 493344 10070780 ~ 10089818 (+)
LOC122328781 pifo other downstream 752415 10329851 ~ 10363818 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other downstream 838227 10415663 ~ 10427162 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other downstream 937543 10514979 ~ 10518751 (+)

Expression


Co-expression Network