gdap1l1 (gdap1l1,LOC107594051,LOC107664149,LOC107707014,LOC107599436,LOC107697944,LOC108433413)


Basic Information

Item Value
gene id gdap1l1
gene name gdap1l1,LOC107594051,LOC107664149,LOC107707014,LOC107599436,LOC107697944,LOC108433413
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 18535712 ~ 18545493 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225346.1
CATCCCTCTCtatccctccctctctctctctctctctctgctcctctctcacacgcacaaaATCCTCTGTCATGGCGTCTTCCAACAATGTTACTCCCACCAACTGTAGCTGGTGGCCCATATCAGCCATGGACGAAGATGGCAAAATCACAGACGGAGAGGAGAGTCACGAGCCCACGATAGAACACAAGCCATACTCCAAAGACAGGCTCGTTCTGTACCACTGGACTCAGTCCTTCAGCTCTCAAAAGGTGCGTCTGGTGATCAATGAGAAAGGTTTGCTGTGTGAAGAACGGGATGTCAGCCTGCCTCTCACTGAGCACAAGGAGCCTTGGTTCATGAGGCTCAACCTTGGGGAGGAAGTGCCGGTGTTTATCCATGGAGACACGATCGTCAGCGACTACAACCAAATCATTGATTATATCGAGACCAACTTTATTGGAGACACAGTAGCCCAGCTGATTCCAGATGAAGGAAGTCCCATGTATGCAAGGGTACAGCAGTACCGAGAGCTGCTGGATGGGCTGCCCATGGATGCTTACACACATGGATGCATCCTGCATCCAGAACTCACAACCGACTCCATGATCCCAAAGTACGCCACTGCTGAAATCCGTAGGCATTTGGCCAATGCAGCATCTGAACTGATGAAGTTGGACCACGAGGAGCCCCAGCTGACAGAACCATACCTCTCCAAGCAGAAAAAGCTGATGGCGAAGATCTTGGATCATGACAATGTGAACTACCTGAAAAAGATTCTTGGTGAGTTGGCGATGGTGCTAGACCAAGTAGAGGCAGagctggaaaaaagaaaactggaATATCAAGGTCAGAAGTGTGAATTATGGCTTTGTGGACCTACTTTTACACTAGCTGATATTTGTCTTGGAGCCACGTTGCACAGGCTCAAGTTCTTGGGACTCTCAAGGAAATACTGGGAGGACGGGAGCCGGCCGAACCTGCAGTCGTTTTTTGAGCGGGTGCAGAAACGCTACGCTTTCCGCAAGGTGTTGGGGGACATCCACACGACCCTGCTCTCTGCAGTTCTACCTAATGCATTCCGAATGCGAAGTCGTCGAAAGTATAAATGGTGAGTAAAGTTCTTGAAATGGAGGTGGTATAGAAATGTGAATGTCAAGTTCGTAAATTGTAATGCGATATTTAATATCAAAGCAAACACGCCTTGATGTTCAATAGAAAAAATTgacttataataaaaataaaacggtcATTTATAGTATATTCACATTAAGCATGCAACTGTTTAATTTAATGGGTTTATAGCCAAAGACGATGTTTTTCCAGTAATCCACTTATACATTTAAACTCAGCTTGACTTAGATAAAACTGTGAGAGACCATTAACACAAGacattatatgcattatatgaGAGTTCTATACCACCTCACACACAAGCCATATACAACTGTGAAGATGCATTCATTTTccgtgattttattttatgtactgCTGTTAGTCATTGTCAATACTACAACTGCAAGAAATGTACAGTACAATGTCTGAGATTCATTTCTCAGCACCTCAAATCTCACAGAAATTTCCTTGATATGGAATGTTTGTTGTAAATTGCGATAAGCTGCGATCCCTATTCTAAAACGGAATGACTGGAAGTTAAATTAATACATGAGAAATATATTGATGTCTGTGGTCATTAGACTtcacaatagatttttttattttgtaatttttatttttatatttttaaaatatgcatttatttacagtgcttTCTAAGATGTTTGTTCATGAGCCTTAATTTGTTCAGTTGCCATCgatttcaataaatgaaaatgcttaCCTTAA
>XM_043225347.1
CCATCCCTCTCtatccctccctctctctctctctctctctgctcctctctcacacgcacaaaATCCTCTGTCATGGCGTCTTCCAACAATGTTACTCCCACCAACTGTAGCTGGTGGCCCATATCAGCCATGGACGAAGATGGCAAAATCACAGACGGAGAGGAGAGTCACGAGCCCACGATAGAACACAAGCCATACTCCAAAGACAGGCTCGTTCTGTACCACTGGACTCAGTCCTTCAGCTCTCAAAAGGTGCGTCTGGTGATCAATGAGAAAGGTTTGCTGTGTGAAGAACGGGATGTCAGCCTGCCTCTCACTGAGCACAAGGAGCCTTGGTTCATGAGGCTCAACCTTGGGGAGGAAGTGCCGGTGTTTATCCATGGAGACACGATCGTCAGCGACTACAACCAAATCATTGATTATATCGAGACCAACTTTATTGGAGACACAGTAGCCCAGCTGATTCCAGATGAAGGAAGTCCCATGTATGCAAGGGTACAGCAGTACCGAGAGCTGCTGGATGGGCTGCCCATGGATGCTTACACACATGGATGCATCCTGCATCCAGAACTCACAACCGACTCCATGATCCCAAAGTACGCCACTGCTGAAATCCGTAGGCATTTGGCCAATGCAGCATCTGAACTGATGAAGTTGGACCACGAGGAGCCCCAGCTGACAGAACCATACCTCTCCAAGCAGAAAAAGCTGATGGCGAAGATCTTGGATCATGACAATGTGAACTACCTGAAAAAGATTCTTGGTGAGTTGGCGATGGTGCTAGACCAAGTAGAGGCAGagctggaaaaaagaaaactggaATATCAAGGTCAGAAGTGTGAATTATGGCTTTGTGGACCTACTTTTACACTAGCTGATATTTGTCTTGGAGCCACGTTGCACAGGCTCAAGTTCTTGGGACTCTCAAGGAAATACTGGGAGGACGGGAGCCGGCCGAACCTGCAGTCGTTTTTTGAGCGGGTGCAGAAACGCTACGCTTTCCGCAAGGTGTTGGGGGACATCCACACGACCCTGCTCTCTGCAGTTCTACCTAATGCATTCCGAATGGTAAAAAAGAAGCCGCCGTCCTTCTTTGGCGCATCCTTCTTAATGGGCTCTCTCGGGGGGATGGGCTATTTTGCCTattggtttttaaaaaagaaatacatgtaGTGAATGTGCTCTTGTagtgttttgtgtctgtgtatctgtgtgaaGTTCGAACTTTTCGGTAACACTGTTTTACGAGAGCaggaaaaacaagacaatataCAGAGATTAACACTATTACTTACTTgggtgaataattaaataaatatataatgagaACATTCCAAGACTAGGAATTCTTCTTAACAGCACCTTCTCTGGTAACGAATGCcttcatgactttttttttttttttttttttttttttttttaaacgagttactggtttatttttgttcatattagGCTTGCATACAGCataattatgttgttttgttcCGTCCAGATTATAAACACTTCGCATTCTGCCATTGAGGACACCTGTAGTTTGATTTGGTTATGTGGTAGAGCACAAAAGCCAAGTATATTATCAACGCAAAGcccaaaataatgtttattaatctaCCCCGAATTCGCAAGCATTCATATTTTGTATGGGTTTCCAAACACTTGATTTATTCTGCGAAACGATCAGCATTTAGTCGTTCACTTTTTAGTGCAGATCACAACCGAATTCAACACATCGCCGTTAGCGTTTCCGGTCCGAATCCGTTTGCCTCTGCATTCAGTTGGAGGAGCCCGTGCcagcaaacattttaaagccCTACATTTTCAGAATATTAAACTTTACCAAGAATGCAAAAACCGAAAAACACTGAAGAGAACAGAATGTTCCTCATAAGACTGCCAAATTGAGCATTTTCTTTCctgtttaattgaatttttttctttttgttttatcacTAGCGAAGTCGTCGAAAGTATAAATGGTGAGTAAAGTTCTTGAAATGGAGGTGGTATAGAAATGTGAATGTCAAGTTCGTAAATTGTAATGCGATATTTAATATCAAAGCAAACACGCCTTGATGTTCAATAGAAAAAATTgacttataataaaaataaaacggtcATTTATAGTATATTCACATTAAGCATGCAACTGTTTAATTTAATGGGTTTATAGCCAAAGACGATGTTTTTCCAGTAATCCACTTATACATTTAAACTCAGCTTGACTTAGATAAAACTGTGAGAGACCATTAACACAAGacattatatgcattatatgaGAGTTCTATACCACCTCACACACAAGCCATATACAACTGTGAAGATGCATTCATTTTccgtgattttattttatgtactgCTGTTAGTCATTGTCAATACTACAACTGCAAGAAATGTACAGTACAATGTCTGAGATTCATTTCTCAGCACCTCAAATCTCACAGAAATTTCCTTGATATGGAATGTTTGTTGTAAATTGCGATAAGCTGCGATCCCTATTCTAAAACGGAATGACTGGAAGTTAAATTAATACATGAGAAATATATTGATGTCTGTGGTCATTAGACTtcacaatagatttttttattttgtaatttttatttttatatttttaaaatatgcatttatttacagtgcttTCTAAGATGTTTGTTCATGAGCCTTAATTTGTTCAGTTGCCATCgatttcaataaatgaaaatgcttaCCTTAA

Function

symbol description
gdap1l1 Predicted to act upstream of or within glutathione metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GDAP1L1 (ganglioside induced differentiation associated protein 1 like 1).

NR:

description
PREDICTED: ganglioside-induced differentiation-associated protein 1-like 1

GO: NA

KEGG:

id description
K22077 GDAP1; ganglioside-induced differentiation-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225346.1 False 1824 mRNA 0.42 7 18535712 18545492
XM_043225347.1 True 2713 mRNA 0.40 6 18535712 18545493

Neighbor

gene id symbol gene type direction distance location
rarga rarga,rarg,LOC107715005,LOC107707012,LOC107593976,LOC107697942,LOC107664174 coding downstream 27971 18456925 ~ 18507741 (-)
hoxc13a hoxc13a,hoxc13,LOC107715003,LOC107593972,LOC107707009 coding downstream 131956 18400997 ~ 18403756 (-)
hoxc12a hoxc12a,LOC107664239,LOC107593973,LOC107715004,LOC107697936,LOC107707010 coding downstream 142193 18391950 ~ 18393519 (-)
hoxc11a hoxc11a,LOC107593971,LOC107706974,LOC107715002,LOC107664237,LOC107697935,LOC107598846 coding downstream 152782 18379954 ~ 18382930 (-)
hoxc10a hoxc10a,LOC107593968,LOC107664221,LOC107714961,LOC107706973,LOC107598838,LOC107697934 coding downstream 159549 18356198 ~ 18376163 (-)
LOC122328645 tuba1b,tuba1c,LOC108255233,LOC107707017 coding upstream 18569 18564062 ~ 18570774 (-)
LOC122328643 tuba1a,LOC108255233,LOC108275946,LOC107664173,LOC107390365 coding upstream 22679 18568172 ~ 18570838 (-)
pmelb LOC107664180,LOC107593983,LOC107715011 coding upstream 33599 18579092 ~ 18584032 (-)
ccnt1 LOC107697949,LOC107593984,LOC107707019,LOC107715012,LOC107664179 coding upstream 39631 18585124 ~ 18592854 (-)
acp1 acp1,LOC107707021,LOC107715013 coding upstream 78895 18624388 ~ 18637498 (-)
LOC122328626 NA non-coding downstream 79206 18421859 ~ 18456506 (-)
G158984 NA non-coding downstream 93233 18440650 ~ 18442479 (-)
G158955 NA non-coding downstream 288885 18244923 ~ 18246827 (-)
G158953 LOC107714996 non-coding downstream 297180 18237897 ~ 18238532 (-)
G158952 NA non-coding downstream 329254 18206143 ~ 18206458 (-)
G158980 LOC107707015,LOC107697945,LOC107593978,LOC107598797,LOC107715007,LOC107664110 non-coding upstream 13927 18559420 ~ 18563142 (-)
LOC122329081 NA non-coding upstream 68183 18613676 ~ 18615145 (-)
G159048 LOC107714930,LOC107664105,LOC107593987 non-coding upstream 96769 18642262 ~ 18644688 (-)
G159052 NA non-coding upstream 102594 18648087 ~ 18648625 (-)
G159054 NA non-coding upstream 118909 18664402 ~ 18731816 (-)
hoxc6a hoxc6a,LOC107593966,LOC107664205,LOC107714999,LOC107706971,LOC107697939,LOC107598897 other downstream 185365 18342334 ~ 18350347 (-)
hoxc1a LOC107598919,LOC107707004,LOC107697929,LOC107594049,LOC107664160,LOC107714959 other downstream 233137 18296046 ~ 18302575 (-)
hnrnpa1b hnrnpa1b,LOC107664187,LOC107714994,LOC107707002 other downstream 300176 18231643 ~ 18235536 (-)
march9 march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772 other downstream 476973 18045926 ~ 18058739 (-)
coq10a si:dkey-190g6.2,LOC107671896,LOC107715030,LOC107598614,LOC107697969,LOC102210977,LOC108425511,LOC102797363 other downstream 1113195 17413703 ~ 17422517 (-)
G159076 LOC107715021,LOC107664216,LOC107593990,LOC107598736,LOC107697953,LOC107707026 other upstream 201898 18747391 ~ 18754712 (-)

Expression


Co-expression Network