G16794


Basic Information

Item Value
gene id G16794
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 6636615 ~ 6641776 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU18817
ATAAACAACATGGTCCGATCAGTTTGGAATGGGCAAGCGGCTACAGCAGTAGCCTATGTGTGCTAACACTGGATGCCGACAGGCAGGGCTTTAGTGATTTGGGATCAGACAATTGATGCTCATTTTCCCTCGGCTTCTTTCTGAAGCCCTGAAAGGGTCTCTTTGTTGTGGAAGAGAGAAAGGATCGGGACGAATAAGGAGATGCGGCACAATAGTGTCTGTTTTTTATGTGGAATGGCTTTTGTATTCACACTGCTATAGGTAGAAAGTCTAAGACTGCCTATGATTTTAAAATTTCTCTTGGTCTCGTCTTGTTCGCTCCTAGTCAGATGGTCCGCGTGTGGGCGCTGCAGAAAGAATGGAGGGATGCTGGTGAAACACATGGGTGGATGTTCAGTTCGAGATCCATCAATACGCCTGTCCCGTCTCCACCTGTAGCAGTCCGAGCACAGCCGAGTGCTCTCCGAGCTTCATCCTTCTCTGCGTGGACAAGCTCACATTCTTAGCCAGGTAATCCACCGCAGTCTGGCCGTACTGACTGTATTGGTAGCCCGCAGTGACGGGGTCCACGCTGTAGCTGGTGGTGCTGTACGTAGGAGGGCAGTAGGACTGGGTGGAAGCGAGGCTGTCGGCGGTCTTGATAGGCTCGGAGCGCTGGCTGCAGCTGGCTGAGATGGGGTTGGAGGCCTCCAGGCTGCTGTGCAGAGGGGAGATGGAGAACTCATGCTGGGGCTGAGGGGCCACGGCACTGGGGTTGCTGAGGATGCTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18817 True 771 lncRNA 0.34 2 6636615 6641776

Neighbor

gene id symbol gene type direction distance location
CI01000001_06507334_06512409 ZNF362B, ZNF362 coding downstream 124206 6506173 ~ 6512409 (-)
CI01000001_06307614_06307988 TAF13, TAF13.S coding downstream 328262 6307404 ~ 6308353 (-)
CI01000001_06285353_06286524 NA coding downstream 350091 6283778 ~ 6286524 (-)
CI01000001_06275328_06282035 NA coding downstream 354580 6273801 ~ 6282035 (-)
CI01000001_06209325_06237504 LAMB2L coding downstream 399111 6209311 ~ 6237504 (-)
CI01000001_06756063_06798700 MEGF6A coding upstream 114262 6756038 ~ 6799081 (-)
CI01000001_06804031_06824280 NA coding upstream 161100 6802876 ~ 6824280 (-)
CI01000001_06932075_06937182 NA coding upstream 289845 6931621 ~ 6937231 (-)
CI01000001_06945753_06946316 NA coding upstream 303977 6945753 ~ 6946365 (-)
CI01000001_06965170_06976281 RNF207B, RNF207 coding upstream 323295 6965071 ~ 6976281 (-)
G16793 NA non-coding downstream 964 6635426 ~ 6635651 (-)
G16753 NA non-coding downstream 21026 6583054 ~ 6615589 (-)
G16740 NA non-coding downstream 87658 6548744 ~ 6548957 (-)
G16730 NA non-coding downstream 99663 6536722 ~ 6536952 (-)
G16711 NA non-coding downstream 163688 6472514 ~ 6472927 (-)
G16830 NA non-coding upstream 30493 6672269 ~ 6673307 (-)
G17786 NA non-coding upstream 188550 6830326 ~ 6830776 (-)
G17789 NA non-coding upstream 245142 6837525 ~ 6890414 (-)
G17793 NA non-coding upstream 251028 6892804 ~ 6893960 (-)
G17791 NA non-coding upstream 272683 6914459 ~ 6917627 (-)
G16664 NA other downstream 288660 6344104 ~ 6347955 (-)
G16462 NA other downstream 1407030 5222777 ~ 5229585 (-)
G16332 NA other downstream 1678773 4950689 ~ 4957842 (-)
G15736 NA other downstream 1835220 4800901 ~ 4801395 (-)
G17911 NA other upstream 609535 7251311 ~ 7267952 (-)
G18023 NA other upstream 1114725 7756501 ~ 7757520 (-)
G18223 NA other upstream 1284328 7926104 ~ 7928517 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021643 pax7b coding NC_007134.7 CM002907.2 20863145 ~ 20936845 (+)