G18223


Basic Information

Item Value
gene id G18223
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 7926104 ~ 7928517 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU20485
TCCACCTGAAAACAGCTTTATTTCATTTACAGTAGTGTTTTGATTTTATACAGCAGTATATTGCTCCATTTGACATTAGTGCAAAAAATTCATGTTTGTTCTTAAATATAGCAAAACATAACACAAAGTTTCAGGATATTTGGTTATATACATACTGTAATTCCTTTCTGTGGGGTTGTGGTCCTGTGGTGTTATGTATTATCAGTGCAGGATGCTTCACCTCTACAGAAATGCACATACGCAGCACTCTGATGTCCCTGGACATAAACTTATACTGACCTTAAACACGTTTCTCTGAATTAAAGTCCTTAAAAAAAGGAAATAAAATTCTAACTTCTCAGAAGTTTTGAAATCATATAATACTACGCTACATTTTAAAACCTACATACAATGGCAGAGAGCAGGATTTACTTAAAGGATAGTTCACACAAAAATGTTAATCATATACTCACCTTTATATCGTTCCAAACCGTATGCATTTATTTCTTATGTGTAACATAAAAGAAAATATTTAGCAGAATGTCCAAGCTGCTCTTTTTCCATACGACTGTCCCTTTTCCACATTACTTCCATTGTACAGGAAAAAAAGCTTAGACATTCTTCTAAATATCTCCTTTTTGTGTGTTCTACATAGAAAGGAGCGTCATACAGATTTGGAAAGTCATAAATGTTCATTTTTGTGGAAACTATCCCCTGCTTTGGGGTGATCTGTGCTCTCATCAGTTAAACTAATTACAAAACCCACTGTTCACTCATCCGCCCATCTGAGGTAAGATGCACTGGTAGTGGCTGTTACCAATGACATCACAGCACAACACATACTATCTAGATCCGATCAAAGCTGACAATCCTGGCGAATAAACAAAATTTAGAAAATGCAATATACAATGACATGGTTCAATGTTATCAACATTGTAAACTAACTAAAGACTTACGACAAAATACTAATAAATGTGACATACAACATATAGGAGCTTATAATAGCCGAGTTACTCACATTGAAGGGCTTGATATTGAAGTGTCAGTATTACTGATTACCCGTTAGTTAATCAGGATTAGTTCTGAGCACCGATCACCCTTTCGAAAACATGAGAAATGAGAAAGTGCAGCTTTAACGTCACAGCTAGTTTTTAGGTATGGCTATAGTCTTATTAGAAAGACATTTCTCCTGGTTAGTGATATAGACGTGTCATTAGTGTCGAGTTTGTACTCATGTAGAGCTCAAACTCTCGAAAGCTTGTAATACATGACTGTAAAAACCAAACCGAACATGTCCGTTAGATAAAACACTAAATACCTGTTCTCCCTTACACTCACATTTCATACCAAACACCAGTGCTTCTCTGATATGCAATAAGTATGTCCATTAGTATGTTAAAACTATATCTCTGCTCTTAAGTCAGAGGTGGTCCTTCAAACATCTCTGAAATAGTGTCATGTTTATATTACATTTGATAAATAAATAGGAAAATACATAAAACATATATTATGTTATCAACATGATCTGACCACACTCAGTTGTATGTAGTGTAGAGTCCAGCCCCCGCTTTGTGAGAATTTTTCTGCTTCTAAATGTCCATGCGCATCTGTGGTGAGACAGGGCAGCATTGCACGTTACTACCACCTAGTGTGGCACAGCAGCACTACATTATTATGTTCTGCCAAGACGAAATTTCTGTAAACATGCATGGCAGAACCTGTCAAGAGCTACATTCCTAAAGTTGTTCATACTTTTTTTTAAATATATTATTTCTTAATATTTGAAAAAAGAATCGTAAACATAAATTAAATATACATTTAGATATACATCATACACAAAGTGACCGCAAAATGGCAGAGCAACATTATTTTGCACTTTCAAGCACTGGGATTTATAGGGTGAGAGTTGTGGAGGCCTAGAGTGTATGAGAGTGTGTGATTTTTCTTTTCATCCTTTTTTACCCTCGTGAGCTGTGGAATGCTGCAGTATTCCTCCAGGCAGAGGGAGGCCGCTGTGGCCCACGAAACACTCCTCATCTGGTGCTCAAACAGAGCAGTTGCGCCTCTTTGCCACGCAGGGCAGGCCGCTGGAGCTAAGCCGGGTTTTTACCCTTTGTCAAAGACTGGTGGAGGAGACGGAAAGTGTAGGAGAGGACGGAGGTGGAAAGTTGAGGAGCTCCAGGACAGCGACTCCCACGCTGCTACGGCGTGTGAACATGCAAGACGCCGCCACCCACTTGTTGCTACGAGGGTTGTATTTTTCTATAGAATTGAGACTAGAGCTGCCATCATTGCCTCCAACCGCATATAACCAGCCATCCATGGCGACCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20485 True 2312 TUCP 0.39 2 7926104 7928517

Neighbor

gene id symbol gene type direction distance location
CI01000001_07875805_07905655 NOC2L coding downstream 20449 7875738 ~ 7905655 (-)
CI01000001_07807093_07808245 NA coding downstream 117611 7805913 ~ 7808493 (-)
CI01000001_07769921_07796135 NA coding downstream 129557 7769089 ~ 7796547 (-)
CI01000001_07609855_07631058 NA coding downstream 294819 7609820 ~ 7631285 (-)
CI01000001_07568083_07573146 CA6 coding downstream 352765 7568083 ~ 7573339 (-)
CI01000001_07953501_07958007 NA coding upstream 24716 7953233 ~ 7958007 (-)
CI01000001_08036532_08037745 HER9, HES4 coding upstream 107709 8036226 ~ 8038004 (-)
CI01000001_08109635_08112413 NA coding upstream 181093 8109610 ~ 8112517 (-)
CI01000001_08190314_08198511 NA coding upstream 261688 8190205 ~ 8198771 (-)
CI01000001_08245959_08246775 NA coding upstream 316135 8244652 ~ 8246775 (-)
G18222 NA non-coding downstream 19254 7906525 ~ 7906850 (-)
G18171 NA non-coding downstream 126478 7799030 ~ 7799626 (-)
G18141 NA non-coding downstream 188620 7728123 ~ 7737484 (-)
G18239 NA non-coding upstream 6637 7935154 ~ 7935374 (-)
G18243 NA non-coding upstream 40933 7969450 ~ 7969723 (-)
G18248 NA non-coding upstream 47467 7975984 ~ 7976201 (-)
G18277 NA non-coding upstream 103688 8032205 ~ 8032488 (-)
G18300 NA non-coding upstream 156215 8084732 ~ 8084946 (-)
G18023 NA other downstream 168584 7756501 ~ 7757520 (-)
G17911 NA other downstream 672850 7251311 ~ 7267952 (-)
CI01000001_06932075_06937182 NA other downstream 988881 6931621 ~ 6937231 (-)
G17789 NA other downstream 1035690 6837525 ~ 6890414 (-)
G16753 NA other downstream 1310515 6583054 ~ 6615589 (-)
CI01000001_09804494_09811219 NA other upstream 1881140 9804429 ~ 9811219 (-)
G20136 NA other upstream 2610510 10539027 ~ 10539850 (-)
CI01000001_10862471_10864514 NA other upstream 2933708 10862225 ~ 10865770 (-)
G20230 NA other upstream 3093610 11022127 ~ 11028777 (-)
G20319 NA other upstream 3182320 11110837 ~ 11114747 (-)

Expression


Co-expression Network