G21045


Basic Information

Item Value
gene id G21045
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17980167 ~ 18067318 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU31270
aaagagagagagagagagagagagagagagagagagagagagagagagagaggagagacagagagagattgtAGGAAGACAGAACGtgagagatgaagaaagaaaaaagtaaggGAGTGAACGAATGCAGAAGCGATCTGAGTGTAATCCGTGTTGGAAGAACAGCCGTGGCTGAAGTGTTGGCAGTAATGTGGGAACGGTATTCCGGTCTGCAGACGCTATTGATTCCACCGGCATGAGAAGCAAACCCTCCGCCTCAGTTCAGCACGCCTCCCAACCCCATCACTCATTAGACAGGAGACTGCGATGATctcatcctcttcctcacacacatgcacacaaacacacacacacacacacacacacacggttccTTTGCCCCTCTGTTCTCTTTATTCCCTCTTCTATTTCTCTGTCTTCACATTCCAGCTCTCTAGAGACACTTATTATTCCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31270 True 456 lncRNA 0.48 2 17980167 18067318

Neighbor

gene id symbol gene type direction distance location
raver1 raver1,LOC107703359,LOC107587918,LOC107674651,LOC107596810,LOC107754048 coding upstream 9493 17954849 ~ 17970674 (+)
tyk2 tyk2,LOC107703360,LOC107587917,LOC107674650,LOC107596804 coding upstream 25835 17931705 ~ 17954332 (+)
unkl unkl,LOC107550311,LOC107674636,LOC107565763,LOC107710649,LOC107703366,LOC106601098 coding upstream 264545 17691906 ~ 17715622 (+)
gper1 LOC107703333,LOC107710646,LOC107579847,LOC107719188,LOC107565760,LOC107674622 coding upstream 294472 17679275 ~ 17685695 (+)
gpr146 LOC107565765,LOC107710650,LOC107674685,LOC107703371,LOC107550312,LOC107719180 coding upstream 311475 17658434 ~ 17668692 (+)
c3h16orf72 zgc:66160,c2h16orf72,LOC107738628,LOC107590581,LOC107685917,LOC107690255,LOC105900007,LOC103025273 coding downstream 57676 18124994 ~ 18129811 (+)
atf7ip2 LOC107690257,LOC107733857 coding downstream 305439 18372757 ~ 18378482 (+)
ciita LOC107567931,LOC107733851,LOC107690261 coding downstream 359042 18426360 ~ 18437883 (+)
clec16a clec16a,LOC107690263,LOC107590577,LOC107567904 coding downstream 376053 18443371 ~ 18487548 (+)
pigq pigq,LOC107690265,LOC107733876,LOC107729199,LOC107590576,LOC107685906 coding downstream 428276 18495594 ~ 18504038 (+)
G20994 NA non-coding upstream 117086 17862067 ~ 17863081 (+)
G20951 h3f3b,H3F3A,LOC105909691,LOC101073377,LOC107388308,LOC102790198,LOC107572204,LOC106578873 non-coding upstream 289879 17689415 ~ 17690288 (+)
G20953 NA non-coding upstream 328866 17650767 ~ 17651301 (+)
G20927 NA non-coding upstream 407694 17572130 ~ 17572473 (+)
G20915 LOC107550314,LOC107703374,LOC107719177,LOC107565769,LOC107741796 non-coding upstream 416803 17553374 ~ 17563364 (+)
G21073 NA non-coding downstream 49220 18116538 ~ 18119426 (+)
G21076 NA non-coding downstream 90853 18158171 ~ 18158546 (+)
LOC122341661 LOC107601299,LOC107654457,LOC107720081,LOC107688136,LOC107721482 non-coding downstream 507369 18574687 ~ 18744585 (+)
LOC122331012 NA non-coding downstream 585043 18652361 ~ 18654715 (+)
G21180 NA non-coding downstream 635266 18702584 ~ 18703683 (+)
si:ch211-66e2.5 si:ch211-66e2.5,LOC107572173,LOC107703361,LOC107596817,LOC107754045,LOC107735828,LOC107674574 other upstream 50533 17920917 ~ 17929634 (+)
polr3k polr3k,LOC107703329 other upstream 73524 17904584 ~ 17906643 (+)
mrtfbb LOC107725018,LOC107572174,LOC107703365,LOC107674669 other upstream 78676 17870177 ~ 17901491 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other upstream 256744 17719182 ~ 17723423 (+)
LOC122341316 NA other upstream 779537 17137930 ~ 17200630 (+)
LOC122341796 pde6g,LOC107690252,LOC107733865,LOC107685924,LOC107590586 other downstream 6757 18074075 ~ 18075616 (+)
si:ch211-157c3.4 LOC107690254,LOC107733863,LOC107738629,LOC107568011,LOC107685921,LOC107590583 other downstream 30327 18097645 ~ 18101933 (+)
nubp1 nubp1,LOC107690260,LOC107685912,LOC107590599 other downstream 338648 18405966 ~ 18425076 (+)
G21124 rab40c,LOC107685905,LOC107590575,LOC107567894,LOC107690266,LOC103366693 other downstream 376072 18443390 ~ 18843419 (+)
G21173 LOC107601293,LOC107688129,LOC107720008,LOC107654513 other downstream 615036 18682354 ~ 18687853 (+)

Expression


Co-expression Network