zc3h7a (zc3h7a,LOC107727124,LOC107564690,LOC107674666,LOC107703382)


Basic Information

Item Value
gene id zc3h7a
gene name zc3h7a,LOC107727124,LOC107564690,LOC107674666,LOC107703382
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17024634 ~ 17037487 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235100.1
CCTTCTTTAGCCGCTAAACGAAAAAGTGAACAAGACGTCACGAAGATCACGTTGCCCAAAGAAGAAACAGGATTGACGAACACATGAAAACATTAGTGATTGCGTGGGGCACTCTCTTTAACGCCGAACACCGATATATTTAAGGTGCTGACCGCAGTCAGGTCCTACACGCATATGGGAACATGTCGGCCACGGGCCAGGATCGAAGCAGCCGCTGGCAGGACATCCAGAAGGGCTTGCAGTTCATTCAGTCTACCCTGCCTTTTCCTGGCACCCAAGAGCAGTATGAAGTGTTCATCCAGAGTTTGGTGAGGAATCTGTTTGGCGAGGGAAATGAAGTGTTCCTTGAAGGCGATTGGGCGCGATCTGTTGAATTATACACGGAGGCCTTAAACATAGCAGAATACGCAGAATCCGAGGACATCCTCGTCTCTCAAAACCTGAGAGAGAAGCTTCATGCGAACCGTGCTGCATCCTACTTAAACATTGGGCTGCATGATCAAGCCTTAGAGGACTCTGAAAAAGCTCTTCAACTCAACGAGTGCAACCACAGAGCACTTTACCGGAAAGCTCGATGTCTCAAAGAAATGGGAAGACATCAAGAGGCTTATGAGGTGGTTGCTAAATGCTCCATGGCAGTGCCTCAGGATACTCATGTGATTGAAATGACCCAGGAGCTTGCCAAGATGTTGGGACTAAAAATCCGTAAGGCTTATGTCAGaagcaagcctgCCTTAAATGCTTTGCCCGGTTTAAGTCTATCGGGAGCAGTTAATGATAAGCATTCTCACAGCTCTTCCTCTGTGGAGGATATTGAAATGGAAGTTGGCCAGGGAATGGGCGACCCGGTACAAGTCAGTACGCCATTGTGTTGTACAGTAAATGAGAAGGAAGAAGTCGAGTCCAAGCCTCTTGTTGGTGTCATCTCGCCTCCGGTCGTCCCGGCTGAGTCACATAATCCAGAACCTGTTCCCATGCCCATACACATGTCTCTGGTTAATGGAACCAGGCCCAATGACTCTTACACAGTACCAGACACCCGTTTGGACTATGATACAGATATTATCGGGGATGATCTGGATGAGCTTTTAGACCGAGCGAGTCCTCCCGAGTCTTCTTTGGATATTCCCACAGTGGATGGACCTATTCCTTTACCGACCAGTATTGCTGTCAGTAGTTCAGTACCAAGTTCGTTGCTCATGCCTTCCCACCTGAGCCATCCATTTTTGACTACGCAGTGCACAGTAAATTTACCTCCACTGTATCACAAGCCAATTTCATCGTTTTCTCTTGGTCTGGACACGTTTTCATCACCTCTGGATTCATTGGATAGTTTGTCAATTTCAGAGTCTCCAACAGATAAACCTTTTAGCCCGCATCATTTTATGCCGCTGAGTAATAGCGACATGTCAGTGCCAACCATTCCACCCATCGGTATGGGTTTCAGCACATCCAATGGGACATTCATGCAGGATTATCCACCGCAGTTAGACTTTGCTAAGAACCCACTTGCTGATACCCATGAATTTAAACAGGCCTGTACCTCATGCTACATTAAAACCGGCTCTGGAGTGCTGGATTACACTTATCATCCAAAGGAccacaaatgtaaaaaagattTGCTTTTGGGAAGAACCAAACATTGTGAAATTCCAACATGGAAACTTATTCGACCAAGACCCACTAAAAACCAGTACATGGGGCCTTATTATATTTGCAAAGatGTGGCGATTGGACAGGAATGCCGGTATCTTGGCCATTGTACCTTTGCTTATTGCCAAGAGGAAATTGATGTGTGGACACTAGAACGGAAAGGCTTCATATGCAGAGAAAATCTGTGCGATCCTTATGGATCTAAATCTGTAATCCGTTTGACTGTGCCCAAAATATTACAGGAGCACCATGGGATATTTATGTTCCTCTGTGAGGTGTGCTTTGATCACAAACCCCGAATAATCAGCAAAACCAGTAAGGACAACCCCAGTCTATGCTCTCACCCAGTGACAAAGCATGTGTTTGAGGAAAAGAAGTGCCTTGTACACTATTTAAAAGACACAACCGTCAGGTACTCCAAAATCCGTCCATACTTCCCTCATTGCCAGATGGATCTGTGTAGGCATGAGGTGAGGTATGGCTGCCAGAGAGAGGATTTCTGCTATTACTCCCACAGCCTCATTGAGCTTAAAGTATGGATGATGCAGAGTGTACAAGGTATCACACATGAAGGTATTTACCAGGAGTCACAGAAATATTGGAATATGGATGGTGCTGCTCATGCTCAGGACCTCCCACCGGCCCTGCGCAGATTTGGACCAGCTAACCTGAAGATGCAGTTTGTATGTGCTCTGTGTTGGAGGAACGGCCAAGTCAGCGAACCAGACAAAAACAAGAAGTACTGCAGTGCAAAGGCCCGGCATCCCTGGTCTAAAGAGAGACGGGTGCTTCTGGTTAGCTCTGTTGAACGGAAAAAGTGGACCACTGTTCGACCTCTACCAACCAAAAAGCCTATTCCTGCTCAGTTTGAAATTTGTATGCATGTGGCAGCTGGCAAAAAGTGCCAGTATATTGGAAACTGCTCTTTTGCTCACAGCACAGAAGAGAGAGATCTGTGGACCTTCATGAAAGATAGCAATATTGCAGACATGGAGCAGCTGTATGAGATGTGGCTGCAGTCTCAGAAGTTGGCCTGGAGCGAggagagcagcagcagcagcagcactaCCCGAGAGAATGGCAAGAAGATTCACATGCCCACAGACTACGCCGAGGAAGTGGTTGGCAACCATTGCTGGTTGTGTGGAAAAAACTGCAACAGTGATAAGCAGTGGCAGCAACATATCACCTCAGAGAAGCACAAAGAACGAGTGTTCAACTCCGAGGACGATCAGAACTGCTGGCAGTATCGCTTCCCCACCGGAACCTTCAAAGTTTGCGAACGGTTCCTCAAGGACACATGCACGGAGGAGGAGCTTTGTAAGCTGGCACACGGAGATGAGGAACTGAAGGAATGGAAGGACAGGAGAGAATTCCTTTTGATGAAACTCGCCAAAGCCAGAAAAGATCACTTGATAGCACCAAACGATAATGACTTTGGCAAATATAGTTTTCTGCTTAAAGAtattaagtaatgttttaattaatccGAATCTGTTAATGCAGGGTGTTCTGGAACTATGATGTCTTGAGTTCAGTTTTGAATCGGGCGAGCGCGGTGTGGCTCTCTCCGGAGAAGGACATGGTCCTGGGTTTTCACGGAAAGCGCAGAGCTGGCCTTGTGTTCAGAGTCTTTGTTGCTTTTATCACCGGTTATAATAAACCATCgccttttatgttttttattaaatagcaCACAGCGGATCACCTTTCTGGAACTGGATTTTGCTCACGAAAACCAAaacggaaagaaaaaaatagcgCGTCTGAGATTCCAGTGTCAAACTCCCGCCTTTTTTGTTAACCGCGGTTTGTTTTGGAATGTTGGTGCGGACTCTGTTATTCTATATCCGCACCGAATGACTTTACTACGTTGTGTGGTTGCTGTGTTAATGCCTGTTGGTATTAAATATGAACCGACATAAACACAATAAAGTGGTATTCTTTTCACTGTCTGTAGTTCCTGAAATCAAAACGGCGAGGGAAGTAGTACCATTACAGtgtatttatgaaaacaaatcGGCATGCTGTATGCGAAATTGGTCGAGACGTGTTTTATCCACTAGAGGGAGACAGAATCAACGACAACCTGCACTTCTGTATCTTAAATGCTTTGTGGGCTGTATCTGATGTGCATTCtctgtaataaatatttcattttatttaaatttaaa
>XM_043235101.1
AGGTGCTCGGTAAAATGCTACCATGCTAGTTTACCTAGCGACTGTTCACACAGGAGTTTGCATGACCAACCATTTGGCTAGCACACAAGATCTGCGTGTTCCTGGTTTCCCGGATAAACAGGTCAGAGTCTCGGTGCCAGCCCTACAGCAGATAATGCCCAGCGGAGTTGTCATCTTGTGAAGGCGTTGGGCTGAACACCGGCCGTGTTTCAACAATGAGCGAGTTTTCTCAGTCGACACGCGTCGAATGCGTTTTGTTTCTTCTTCGCGGATGCTTTGAAACGGGGCTTTCTTCGTGAACTATGCGAGAAGTTTCTCTGGCAACATCAACCCGTACTAAACGCCGCTTTCCTGTGAATTTCCCTTACCTGCCGCACAGGGGACTGAAGTTAAAGAAGTGCTGACCGCAGTCAGGTCCTACACGCATATGGGAACATGTCGGCCACGGGCCAGGATCGAAGCAGCCGCTGGCAGGACATCCAGAAGGGCTTGCAGTTCATTCAGTCTACCCTGCCTTTTCCTGGCACCCAAGAGCAGTATGAAGTGTTCATCCAGAGTTTGGTGAGGAATCTGTTTGGCGAGGGAAATGAAGTGTTCCTTGAAGGCGATTGGGCGCGATCTGTTGAATTATACACGGAGGCCTTAAACATAGCAGAATACGCAGAATCCGAGGACATCCTCGTCTCTCAAAACCTGAGAGAGAAGCTTCATGCGAACCGTGCTGCATCCTACTTAAACATTGGGCTGCATGATCAAGCCTTAGAGGACTCTGAAAAAGCTCTTCAACTCAACGAGTGCAACCACAGAGCACTTTACCGGAAAGCTCGATGTCTCAAAGAAATGGGAAGACATCAAGAGGCTTATGAGGTGGTTGCTAAATGCTCCATGGCAGTGCCTCAGGATACTCATGTGATTGAAATGACCCAGGAGCTTGCCAAGATGTTGGGACTAAAAATCCGTAAGGCTTATGTCAGaagcaagcctgCCTTAAATGCTTTGCCCGGTTTAAGTCTATCGGGAGCAGTTAATGATAAGCATTCTCACAGCTCTTCCTCTGTGGAGGATATTGAAATGGAAGTTGGCCAGGGAATGGGCGACCCGGTACAAGTCAGTACGCCATTGTGTTGTACAGTAAATGAGAAGGAAGAAGTCGAGTCCAAGCCTCTTGTTGGTGTCATCTCGCCTCCGGTCGTCCCGGCTGAGTCACATAATCCAGAACCTGTTCCCATGCCCATACACATGTCTCTGGTTAATGGAACCAGGCCCAATGACTCTTACACAGTACCAGACACCCGTTTGGACTATGATACAGATATTATCGGGGATGATCTGGATGAGCTTTTAGACCGAGCGAGTCCTCCCGAGTCTTCTTTGGATATTCCCACAGTGGATGGACCTATTCCTTTACCGACCAGTATTGCTGTCAGTAGTTCAGTACCAAGTTCGTTGCTCATGCCTTCCCACCTGAGCCATCCATTTTTGACTACGCAGTGCACAGTAAATTTACCTCCACTGTATCACAAGCCAATTTCATCGTTTTCTCTTGGTCTGGACACGTTTTCATCACCTCTGGATTCATTGGATAGTTTGTCAATTTCAGAGTCTCCAACAGATAAACCTTTTAGCCCGCATCATTTTATGCCGCTGAGTAATAGCGACATGTCAGTGCCAACCATTCCACCCATCGGTATGGGTTTCAGCACATCCAATGGGACATTCATGCAGGATTATCCACCGCAGTTAGACTTTGCTAAGAACCCACTTGCTGATACCCATGAATTTAAACAGGCCTGTACCTCATGCTACATTAAAACCGGCTCTGGAGTGCTGGATTACACTTATCATCCAAAGGAccacaaatgtaaaaaagattTGCTTTTGGGAAGAACCAAACATTGTGAAATTCCAACATGGAAACTTATTCGACCAAGACCCACTAAAAACCAGTACATGGGGCCTTATTATATTTGCAAAGatGTGGCGATTGGACAGGAATGCCGGTATCTTGGCCATTGTACCTTTGCTTATTGCCAAGAGGAAATTGATGTGTGGACACTAGAACGGAAAGGCTTCATATGCAGAGAAAATCTGTGCGATCCTTATGGATCTAAATCTGTAATCCGTTTGACTGTGCCCAAAATATTACAGGAGCACCATGGGATATTTATGTTCCTCTGTGAGGTGTGCTTTGATCACAAACCCCGAATAATCAGCAAAACCAGTAAGGACAACCCCAGTCTATGCTCTCACCCAGTGACAAAGCATGTGTTTGAGGAAAAGAAGTGCCTTGTACACTATTTAAAAGACACAACCGTCAGGTACTCCAAAATCCGTCCATACTTCCCTCATTGCCAGATGGATCTGTGTAGGCATGAGGTGAGGTATGGCTGCCAGAGAGAGGATTTCTGCTATTACTCCCACAGCCTCATTGAGCTTAAAGTATGGATGATGCAGAGTGTACAAGGTATCACACATGAAGGTATTTACCAGGAGTCACAGAAATATTGGAATATGGATGGTGCTGCTCATGCTCAGGACCTCCCACCGGCCCTGCGCAGATTTGGACCAGCTAACCTGAAGATGCAGTTTGTATGTGCTCTGTGTTGGAGGAACGGCCAAGTCAGCGAACCAGACAAAAACAAGAAGTACTGCAGTGCAAAGGCCCGGCATCCCTGGTCTAAAGAGAGACGGGTGCTTCTGGTTAGCTCTGTTGAACGGAAAAAGTGGACCACTGTTCGACCTCTACCAACCAAAAAGCCTATTCCTGCTCAGTTTGAAATTTGTATGCATGTGGCAGCTGGCAAAAAGTGCCAGTATATTGGAAACTGCTCTTTTGCTCACAGCACAGAAGAGAGAGATCTGTGGACCTTCATGAAAGATAGCAATATTGCAGACATGGAGCAGCTGTATGAGATGTGGCTGCAGTCTCAGAAGTTGGCCTGGAGCGAggagagcagcagcagcagcagcactaCCCGAGAGAATGGCAAGAAGATTCACATGCCCACAGACTACGCCGAGGAAGTGGTTGGCAACCATTGCTGGTTGTGTGGAAAAAACTGCAACAGTGATAAGCAGTGGCAGCAACATATCACCTCAGAGAAGCACAAAGAACGAGTGTTCAACTCCGAGGACGATCAGAACTGCTGGCAGTATCGCTTCCCCACCGGAACCTTCAAAGTTTGCGAACGGTTCCTCAAGGACACATGCACGGAGGAGGAGCTTTGTAAGCTGGCACACGGAGATGAGGAACTGAAGGAATGGAAGGACAGGAGAGAATTCCTTTTGATGAAACTCGCCAAAGCCAGAAAAGATCACTTGATAGCACCAAACGATAATGACTTTGGCAAATATAGTTTTCTGCTTAAAGAtattaagtaatgttttaattaatccGAATCTGTTAATGCAGGGTGTTCTGGAACTATGATGTCTTGAGTTCAGTTTTGAATCGGGCGAGCGCGGTGTGGCTCTCTCCGGAGAAGGACATGGTCCTGGGTTTTCACGGAAAGCGCAGAGCTGGCCTTGTGTTCAGAGTCTTTGTTGCTTTTATCACCGGTTATAATAAACCATCgccttttatgttttttattaaatagcaCACAGCGGATCACCTTTCTGGAACTGGATTTTGCTCACGAAAACCAAaacggaaagaaaaaaatagcgCGTCTGAGATTCCAGTGTCAAACTCCCGCCTTTTTTGTTAACCGCGGTTTGTTTTGGAATGTTGGTGCGGACTCTGTTATTCTATATCCGCACCGAATGACTTTACTACGTTGTGTGGTTGCTGTGTTAATGCCTGTTGGTATTAAATATGAACCGACATAAACACAATAAAGTGGTATTCTTTTCACTGTCTGTAGTTCCTGAAATCAAAACGGCGAGGGAAGTAGTACCATTACAGtgtatttatgaaaacaaatcGGCATGCTGTATGCGAAATTGGTCGAGACGTGTTTTATCCACTAGAGGGAGACAGAATCAACGACAACCTGCACTTCTGTATCTTAAATGCTTTGTGGGCTGTATCTGATGTGCATTCtctgtaataaatatttcattttatttaaatttaaa

Function

symbol description
zc3h7a Predicted to enable miRNA binding activity. Predicted to be involved in production of miRNAs involved in gene silencing by miRNA. Orthologous to human ZC3H7A (zinc finger CCCH-type containing 7A).

NR:

description
PREDICTED: zinc finger CCCH domain-containing protein 7A isoform X3

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K24945 ZC3H7; zinc finger CCCH domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235100.1 False 3827 mRNA 0.46 23 17024634 17037487
XM_043235101.1 True 4080 mRNA 0.46 23 17024867 17037487

Neighbor

gene id symbol gene type direction distance location
trnat-cgu_1 NA coding upstream 18649 17005914 ~ 17005985 (+)
LOC122341973 NA coding upstream 89115 16934133 ~ 16935519 (+)
galr2b galr2b,LOC107674614,LOC107564701,LOC107753547,LOC107703387,LOC108433115,LOC107745605 coding upstream 121664 16895969 ~ 16902970 (+)
zfand2a zfand2a,LOC107703388,LOC107568938,LOC107674713,LOC107745591 coding upstream 142553 16876854 ~ 16882081 (+)
si:dkey-43p13.5 LOC107753516,LOC107581781,LOC107745606,LOC107674624,LOC107576997 coding upstream 255191 16756053 ~ 16769443 (+)
litaf litaf,LOC107727125,LOC107703380,LOC107674718 coding downstream 5562 17043049 ~ 17045292 (+)
LOC122341850 LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC108433148,LOC105013234 coding downstream 52327 17089814 ~ 17097965 (+)
LOC122332748 NA coding downstream 344296 17381783 ~ 17384185 (+)
hs3st2 hs3st2,LOC107741797,LOC107550309,LOC107574133,LOC107703334,LOC107674621,LOC108433116 coding downstream 385801 17423288 ~ 17449492 (+)
ube2ia ube2i,ube2ia,LOC105013396 coding downstream 528776 17566263 ~ 17570451 (+)
LOC122341954 NA non-coding upstream 5330 17007395 ~ 17019304 (+)
G20744 NA non-coding upstream 237584 16786832 ~ 16787050 (+)
LOC122342129 NA non-coding upstream 427419 16596292 ~ 16597215 (+)
G20656 NA non-coding upstream 716616 16307798 ~ 16308018 (+)
G20647 NA non-coding upstream 731828 16292605 ~ 16292806 (+)
G20797 snn,LOC107564698,LOC107703342 non-coding downstream 1704 17039191 ~ 17042404 (+)
G20801 NA non-coding downstream 20217 17057704 ~ 17062823 (+)
G20829 NA non-coding downstream 37135 17074622 ~ 17074824 (+)
G20830 NA non-coding downstream 37866 17075353 ~ 17075575 (+)
G20831 NA non-coding downstream 38301 17075788 ~ 17076174 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other upstream 239823 16770545 ~ 16784811 (+)
LOC122331507 psmg3,LOC107703392 other upstream 325152 16690703 ~ 16699482 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other upstream 816788 16179620 ~ 16207846 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other upstream 1280440 15706936 ~ 15744194 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other upstream 1744521 15269800 ~ 15280113 (+)
nsmce1 nsmce1 other downstream 75561 17113048 ~ 17117041 (+)
LOC122341316 NA other downstream 100443 17137930 ~ 17200630 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other downstream 681695 17719182 ~ 17723423 (+)
mrtfbb LOC107725018,LOC107572174,LOC107703365,LOC107674669 other downstream 832690 17870177 ~ 17901491 (+)
polr3k polr3k,LOC107703329 other downstream 867097 17904584 ~ 17906643 (+)

Expression


Co-expression Network