G162519


Basic Information

Item Value
gene id G162519
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 13163680 ~ 13163958 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU240561
TTGGGGGAAGAGCACGCGATCCTCGGGCTCGAGGGCGAGTGCGAGCACTGTGATTTGTTTTCTATCAAGGTGCTTCGCGCTCGCCTCGCCTTTTTTAAAGGAGGATCGAGTGGATCGCGTGCCGATCCGGCTGAGCCGCGTGAGACGGACCAGCCCCTTTCTCTCGCGCTCTCGCCGGATCGCGAAGCCCTCGCGTCCGTTTCTCTATCGCGCCCCAGCGCTTCTTCTGAACGGACCGAggagacttcatctcttgcttctggggaagcagaaagtgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240561 True 279 lncRNA 0.61 1 13163680 13163958

Neighbor

gene id symbol gene type direction distance location
rttn rttn,LOC107741901 coding downstream 117315 13000429 ~ 13046365 (-)
cd226 LOC107727393,LOC107689439,LOC107657817,LOC107741959,LOC107589961,LOC107596041 coding downstream 163397 12993875 ~ 13000283 (-)
LOC122330206 LOC107709778,LOC107655805 coding downstream 429481 12622261 ~ 12734199 (-)
LOC122329503 NA coding downstream 982112 12177744 ~ 12181568 (-)
elovl2 elovl2 coding downstream 1055843 12085560 ~ 12107837 (-)
cbln2b cbln2b,LOC107662558,LOC107727212,LOC107589986,LOC107657802,LOC107596058,LOC107741967 coding upstream 33160 13197118 ~ 13200557 (-)
LOC122329458 gdap1,LOC107693809,LOC107589927,LOC107740053,LOC107657807,LOC107596050 coding upstream 380146 13544104 ~ 13550168 (-)
thtpa LOC107693802,LOC107758807,LOC107657808,LOC107735920 coding upstream 424517 13588475 ~ 13590836 (-)
ngdn ngdn,LOC107758813,LOC107740076,LOC107596054 coding upstream 450155 13614113 ~ 13617710 (-)
ncoa2 ncoa2,LOC107693803,LOC107740102,LOC107758812,LOC107596035,LOC107589963 coding upstream 486285 13650243 ~ 13732675 (-)
G162411 NA non-coding downstream 562600 12600152 ~ 12601080 (-)
G162410 NA non-coding downstream 565685 12596815 ~ 12597995 (-)
LOC122330027 gnal,LOC107742053,LOC107702493,LOC108426578,LOC107726148 non-coding downstream 630903 12531361 ~ 12532777 (-)
G162376 NA non-coding downstream 909042 12251990 ~ 12254638 (-)
LOC122329504 NA non-coding downstream 987462 12175563 ~ 12176218 (-)
G162534 NA non-coding upstream 115530 13279488 ~ 13280966 (-)
G162535 neto1,neto1l,LOC107657816,LOC107589957,LOC107727239,LOC107741667,LOC107662554 non-coding upstream 119173 13283131 ~ 13283381 (-)
G162537 NA non-coding upstream 175604 13339562 ~ 13340002 (-)
G162540 NA non-coding upstream 192300 13356258 ~ 13356949 (-)
G162536 NA non-coding upstream 204324 13368282 ~ 13370658 (-)
LOC122329483 jph1a,jph1,LOC107596049,LOC107758817,LOC107740042,LOC107589924,LOC107657819,LOC107693808 other downstream 275499 12834778 ~ 12888181 (-)
mppe1 mppe1,LOC107726146,LOC107702491,LOC105030507 other downstream 858991 12256782 ~ 12304689 (-)
txndc5 txndc5,LOC107730007,LOC107678545,LOC107557239 other downstream 1544600 11582132 ~ 11619080 (-)
G162152 LOC107550009,LOC107709778 other downstream 1810821 11352061 ~ 11352859 (-)
dpp6a dpp6a,dpp6,LOC107755713,LOC107664663,LOC107655790 other downstream 2153432 10666511 ~ 11010248 (-)
G162538 neto1l,LOC107727239,LOC107589957,LOC107662554,LOC107657816,LOC107741667 other upstream 185296 13349254 ~ 13350231 (-)
prdm14 prdm14,LOC107758806,LOC107589925,LOC107693801,LOC107740123,LOC107596036,LOC107758803,LOC102787367 other upstream 480462 13644420 ~ 13648208 (-)
trpa1b trpa1b,LOC107754209,LOC107667585,LOC107589932,LOC107657811,LOC107724420,LOC107596046 other upstream 751282 13915240 ~ 13940226 (-)
ube2wb ube2w,flj11011l,LOC107725703,LOC107691409,LOC107657829,LOC103354920 other upstream 1243804 14407762 ~ 14417444 (-)
si:dkeyp-28d2.4 pck2,LOC107691411,LOC107589937,LOC107754213,LOC107725708,LOC107657833 other upstream 1275243 14439201 ~ 14454681 (-)

Expression


Co-expression Network