LOC122330206 (LOC107709778,LOC107655805)


Basic Information

Item Value
gene id LOC122330206
gene name LOC107709778,LOC107655805
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 12622261 ~ 12734199 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227069.1
ATGTATCTGCTCACACGCAGCTGCGAAAACGGAGAAGTCAGTGAAACGCAGCAGCAGTTCCAACAGAGTGCAGCCTTCAGTAACGATGCACTAAACCTGCCTCTTCATTCCTACTCTCACAGCCCAAACAGAAATGCCAACAACAACACCTCCGACATGACTCATTCTCCCCGGTTTTTAATCGTTGCTGCTGAACTTGGCTCAGGAAAAGAAGCGGATCGCGGGAGAGACGAAGGCTGGGCGCAGCATCTGCACAGGACCAAGGAGTCAAGGCAGTACGCGGAGTCCTGGTCCCACAGTTTCGAGATAGTCGAGGTCTACACTGGCCCAGCGGAGTGCGTACCAGGGCTACTGGTCGCGGGGCCAGCCGCCACAGGCTGGGTGTTGAGACCAGAAGTGGTTACCGCGGGGAGTGGGTCACGGGTTCAAGGTCGCTATGGAAGGGACAGCCCAGAGCGCAGCCACCTGCTAGATGCGATGGGACGTGTGATGGCTGAACACAGGATGGCTATGAGTCGAAACCACCAGGGATGGTGGTCTCGTAGTCGAGGTCGTGCACAGGCCGATGATGAGGACAGCATGGATGCCACTGATGTCACGCCAACTCCAGATGTTGACATCTCATTGGAGATGGATGTGGTGGAGCCAGAAACGGATGATGATTTTCCTGAGCCACTGGATCTCAGCCCCAGAGATGAGAGGCCTCTATCCCCGCTCTTCCAGCGCTCTGTGTCTGAAGACTCTGCTGGCTCCTCTGCCTCCACCACCAGAAAAGCCAAAACTAGAGAAAAGCTCTGTGCCTTCTGCTACTGTGGAGAAAAGAGTCTCTTGGGTCAGGGTGAGTTGAAATTGTTTGGACCCACGCCTGGTTACGTCCCTCTGCACATCCAGAACCGCCGAGGCAGCTCTGAGAAGGACGACGATTACCATGATGATGACAATGATTTTGATGACAATGACAACAACCGCAGCCCAGGGCATCGCGGATGCGGCCTGAAAAAGGTCAGCTCTCCAGACAGCGGCCTGCACTCAACCTCTGCTCCTGGTAGTACGGACCCCGCTGCTGAGGAGCCCGGCCGGAAGTTCTGGGATGAACTGGGCCAAATTGGCCTTCCTGATGACATTAACGTTGCGTCTTTATTTGATCCCACTGGCCAGTGTTGTGCTCACCTGCGCTGTGCCGCCTGGTCAGAGGGTGTATGCCGTGGGGAGGGACAGTCGCTGCTGTATGTGGACAAAGCAATTGACTCAGGGAGCACAGAGtgctgtgcaTACTGTAAGCGCCTTGGAGCATCCATAAAGTGCTGTGAGGAGAGCTGTGGGCGATCCTTTCATTACCCCTGTGCAGCTGCTGCCGGAACCTTCCAGGACATAAAGGCATACACCCTCCTCTGCCCGGATCACATCCAACGAGCCCTTGTCAGATCGAAAGATGAGGTGAAATGTCTGGTGTGTGACAGTTCCGGAGACTTGCTCGATCAGCTCTTCTGCTGTACATGTGGCCAGCATTACCATGGGGCCTGTCTGGACATCACTGTCACCCCACTGAAGAGGGCCGGCTGGCAGTGCCCTGAGTGCAAAGTCTGCCTCGCATGCAAGAACCCAGGGGATGACAGCAAAATGCTGGTGTGTGACATGTGTGATAAAGGCTATCATACCTACTGCCTGCAGCCTGTCATGGACACAATACCCACCAATGGCTGGAGGTGCAAGaACTGCCGGACGTGTGCTCAATGTGGCATGAGGCCTAACGGCCAGTGGTCATCTAATGGTGTAATGTGTGAAGGATGTCAACAGCAGCATGATTCAGCACTGGTCTGCCTCATCTGTGGGCAGAATCAGGATTCTGGCGGCCCTCTGGACAAACACTCATGCTGCACTTGTAAGAGATGGGTTCATGTGGACTGTGAGAGGCGGGAGGGTGCTGACCCTGACACCCAGGTGCAAGATGGGTACACCTGCAGAGTGTGTAAGCAGGTAGAGGAGGAGAGCAGGCACAATCAGCCTGTCAGCAGCCAGGAGGCTTTGTTCACTGACCCAGAGCCAGCCGAGGATGTCTTCATGGCTGTTGAGGAAGTAAATGAAGCTGAGGAGGAAGTGGCGTTAAAGCCAGAGGCCAGAACTAGTCCACTTCCTACTGTGCCAGAAAAGTTCCTGTCAtctgCTGAACCTGCCCAGGAGATCCAGGTTACTGTCACTCTGACAGAGGGTTCCGAGCCTCCTCCTTGCACCTCCACTTTAGTGGGTGTACCCTCCCTCTCCTTTCAGGCCACGTCCACTACTGAAGACCATAACCCGGAGCACAGTCTTATTGGTGCTTTGGAAATGGGGAAGGAAACTGAGGATAAGCTGCCTGATAATACAGAGGATGAACCTGAAGCAGATGTTTCAAAAGCTCTTCCTGCTTTGCCAACCAAAGAAACTTCCCCCAAACACTCTCAAGCACAAGAGGAAGAACCCATGGATGTCTGTCCCTCAGACGCCTCCAGTAAGAAGGATAAAAGTATGGCAGATGTCCCTGAAACCCAGAGTGTTGTTGAGGAAATTGAACATGGACAGAAGGAAGACAAACAAGAGCACGAAGAGGAGAAGGGAGAAGATCCTGAGGTCTCTTGTGTTTTACCTGAGCCTGATAGTGTCCCACAGGTTGCAGAATGCAGTCCTACTGTGGAAATGGACACTACACCTGTCAGTGACCACAGTTTCTCCAGTTTCAGCTCTCCCATTGAGGATAAGAGCCTCGTCTTGAAGCATTCCCCGGGACTGTCCTCTGAGGGCTCAACCAAGTTGACCCAGTCCCCATTTTCCACTGAAGCCTCACCAAGAGAGATGTCTCAAAGCCAGACACCAACCCATGGCTTGAATCTTTCTGGATACAGCCCCAGTGTTTCTAACACCACCTTCTTCCCTCTTACACCCAAGATAGGTATGGGAAAGCCAGCCATCTCGAAGAGGAAGTTCTCTCCAGGAAGGCCTAGGGTAAAGCAGGGTGCATGGAGTAACCGTAGCGCAATGAGTTCGCCCTCTTGGTCTCCAGAGCGCTCGGACGCCTGGGACAGCCCTAAGACCAGGCCGATGCACGGGCTGCCCATCTGGACCATGAGATTGGGTCGTGGATCTGGCTTTCCTGGAAGGCGGCGACCCAGGGGAGCTAACCTGTCTGGGAGAGGTGGCAGAGGACGCTCCAGGCTAAAGACGGAGAGCAGCCCTGTGGTGACCCCTGGGGTGAGCTTAATGGATTCTCCTTATGTGGtaaaagaagaggaggagaactCCATGCACAACACTGTTGTTCTGTTCTCCACATCGGACTCTTTCACACTTAAACAAGacatgtgtgtggtgtgtggaAGCTTCGGTCAGGGTGCTGAGGGCAGACTGTTGGCCTGCTCCCAATGTGGCCAGTGCTACCACCCCTTCTGTGTCAACATTAAGATCACAAAAGTGGTGTTGAGTAAAGGCTGGCGCTGTCTGGAGTGCACAGTGTGTGAGGCATGTGGGCAGGCCACTGACCCCGGGCGCTTGCTTCTCTGTGATGACTGTGACATTAGCTACCACACATACTGTCTGGACCCACCACTGCAGAATGTACCCAAAGGCAGCTGGAAGTGCAAGtgGTGTGTATTGTGTACGCAGTGTGGAGCCACATCGCCTGGCCAGCGCTGTGAGTGGCAGAATAACTATACACAATGCGGTCCGTGTGCGAGTCTCACGGTTTGTCCCGTGTGCACACACAGCTACAGAGAGGAAGAGCTCATCCTACAGTGCCGGCAGTGTGACAGGTGGGTTCATGCCTCATGTCAGGGGCTGAACTCTGATGAAGAGGTGGAGAGCGCAGCGGATGAGGGCTTTGACTGCTCTCTATGTAGAACACATACCATGTCCACACCTGGTGGCACAGTGGCAAAGCTCGTGGAAATCAGTGAGCCTCCTGCAGTGGTACAGGTTCTTTCGAAAGTCAAGGAAAATGAATTCCAGCGGACCTACACTCAGGATGGTGTGTGTCTTACTGAGTCAGGCTTGTGTCAGCTCCAGAGTTTATGTGTCCAGACCGCTCGCCGCAGACGACCTAAACCCAAACTTAAGCTGAAGATCATCAATCAGAACAGTGTGGCTGTGTTGCAGACACCCCCCGACCCCCAGACTGAGCTCTTCAGGGATGGAGACATGGAAGACGGTAGAGcagAAGCGGAGATGGTGGACGGCGAGGGCAAGTCAGACTCCAGCCCCGAGAGAGAGGTCACAGCAGAAGACGACTCGAAGGACACAGATCCCTgcaagaagaggaagaggaagccCTACCGCCCCGGAGGTGCAGAAGCGATGGAATGTGAGCCCAAGCTGGAAGCCCCTGGGAGCCCAGATAGGGATGGAGGAGTGGACAGAGAAACTGGGGCAGATGGAGGTATAGAGGGCATGGCTGACTGTGAAACTCTCAAAGGAGGAGTAGAGGAGACTGAAGACGGGAAGAAGAGAAAGCGGAAACCATATAGACCAGgaCCTCACCCTGACATACCTCTTGATGTCCCAGAGACAAAAACTGCAGAAGGAGAGGGTGAGCAAGCCAAGAAGCGCAGGGGCAGAAAGAAGAGCAAGTTGGAGGATATGTTTCCTGCATACCTGCAGGAGGCTTTCTTTGGCAAAACATTACTCGACCAGAGTAAGAGAGCTTTTCTTGCTCCTCCAACCCAAAGACATACGCAGGGCGTTTTGAGACCTCCACTTCCTGGGCAGGGGGCCAGAAATGCAGCCTCTGAACCAGTTGAGGCTGCAGTCAGGCCAACTGGGCTGCCCATGGAACTAAAGCAAGAAGGCGAGGGATCCAAGCCTCCAGGAGATCGAGCAGATCTCCCTCAGGGACTAGAAGGCCAGGACTCTCAGCAGTTTTTTCGCAAGGTACTAGGACCCACAGAGGGAAACGCCACAAGTGGGCCTCTGCAGCCTAGCATTAAGCCTGTTCGAGAGGGTCTCTCCCAGTCCCCTTTTTTTGACATTCGGGATCGAGGTGGTCTTTTCAGTCCAGACCAGGATGAGGAAAGCCCATGGGCAACACCATCTGCTCCAGCCACCCCTTCAACTCCTCCAACTCCTACTGAACCGGAAGGTGATGGCCTCTCCTACAACCAGCGCAGTCTGCAGCGTTGGGAGAAGGATGAGGAATTGGGAAATCTATCTACCATCTCTCCTGTACTATATGCTAACATGAACTTCCCTAGTCTCAAACAAGACTACCCTGACTGGGCCAGTCGatgcaaacaaataatgaaGATTTGGAGGAAGGTATCAGCAGCAGACAAGGTTCCTTATCTGCAAAAGGCCAAAGATAATAGGGCTGCTCAGAGAATAAATAAGGCACAGAAGCAGGCAGAGAGTCAAGTATGTCGGCCTATTAAAACTGAGCCTGGCCGTATTAAAGGAGAGCGCCCTAATCTGCACCTCCAAATTCCCCCACCCTCAGGCTCCGTATCCACACCCTCCCAGCCGAGCTCTGCAGAGAGTCCCTACCCCCTTGCCCCTGACTCTGCATCTTCAGCCTTTTTTCCTGATGGACCCCTCAAGACCCCTTGCTCAGCTGATGTTCAGACAGACCCATTTTCTAAACTTCCCTCTCAGTCTCCGCACCTTCAGTCTCAGCCATCCACACCATACTCACAGCCTTCTTCCAGCCCCTTGCAGGCCTCTTCCTCAGGATATCCTATGCCTGGCCCACAGGGTGCTACTCAGGGACGGCCAGCCAACTTTGGCTCCCTTGACATGCAACCAGGGACTCCTCGCAGGGCCCAACAGGTTGAcccattttttaaatcacaacagCAAATCCCCAAACCGCAGCAGCTCTCTCAGGAGGCCTTAGGTCCACCTGAGAGTCCTAGATCTAGGCCTGGTGGGCCTGGAGACTCACAGATGTTCTCACCGCCTCATACAGCCCTTTGTGGAGACCCTTACCGTGGGCAGCATGGAGCTAGCCGGCAAGATCATGCTTCATCTCCATCACCTTCTGCGATAGCTTCTTCACCTGCTGCAGTGGGTCAAAATAGGGCAGAAATTAATGCCCCATCTCCACGTTCTTCATTTGGCAGACAAGACCTAAGCTCTGGTTCTCCTGCTAGTTTGGACTGTGGAGATGGGCTATTTAAAGCTCCCATGACACCTCGTATGCATCAGGGGGATGCAGGCGGATTATCTGTTTCACACCCTCCAGGTGCCTCTCCAAATCATCCTCCTGAGAGCTACCGCCAATCTCCCTCTACGTTCTCTGACCCTTACGCCCAGCCTCCTCTCACACCGCGACCTCAATCGGGACTGCATGAGTACCATGACCAGACTCAGTCCTCGAACAGACTGGAGACGTCTACAATGTGCACTTCTTTTATTTTGGTGGAGGAATCTCTGTCTAAAGGCCAGAGCTAA

Function

NR:

description
PREDICTED: histone-lysine N-methyltransferase 2C-like isoform X5

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0005634 nucleus cellular_component
GO:0008168 methyltransferase activity molecular_function
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227069.1 True 6411 mRNA 0.54 34 12622261 12734199

Neighbor

gene id symbol gene type direction distance location
LOC122329503 NA coding downstream 440693 12177744 ~ 12181568 (-)
elovl2 elovl2 coding downstream 514424 12085560 ~ 12107837 (-)
gcm2 gcm2,LOC107707735,LOC107664656,LOC107552658,LOC107654664 coding downstream 550395 12066758 ~ 12071866 (-)
mak mak coding downstream 585937 12011205 ~ 12036324 (-)
tfap2a tfap2a,LOC107671378,LOC107664660 coding downstream 617783 11994722 ~ 12004478 (-)
cd226 LOC107727393,LOC107689439,LOC107657817,LOC107741959,LOC107589961,LOC107596041 coding upstream 259676 12993875 ~ 13000283 (-)
rttn rttn,LOC107741901 coding upstream 266230 13000429 ~ 13046365 (-)
cbln2b cbln2b,LOC107662558,LOC107727212,LOC107589986,LOC107657802,LOC107596058,LOC107741967 coding upstream 462919 13197118 ~ 13200557 (-)
LOC122329458 gdap1,LOC107693809,LOC107589927,LOC107740053,LOC107657807,LOC107596050 coding upstream 809905 13544104 ~ 13550168 (-)
thtpa LOC107693802,LOC107758807,LOC107657808,LOC107735920 coding upstream 854276 13588475 ~ 13590836 (-)
G162411 NA non-coding downstream 21181 12600152 ~ 12601080 (-)
G162410 NA non-coding downstream 24266 12596815 ~ 12597995 (-)
LOC122330027 gnal,LOC107742053,LOC107702493,LOC108426578,LOC107726148 non-coding downstream 89484 12531361 ~ 12532777 (-)
G162376 NA non-coding downstream 367623 12251990 ~ 12254638 (-)
LOC122329504 NA non-coding downstream 446043 12175563 ~ 12176218 (-)
G162519 NA non-coding upstream 429481 13163680 ~ 13163958 (-)
G162534 NA non-coding upstream 545289 13279488 ~ 13280966 (-)
G162535 neto1,neto1l,LOC107657816,LOC107589957,LOC107727239,LOC107741667,LOC107662554 non-coding upstream 548932 13283131 ~ 13283381 (-)
G162537 NA non-coding upstream 605363 13339562 ~ 13340002 (-)
G162540 NA non-coding upstream 622059 13356258 ~ 13356949 (-)
mppe1 mppe1,LOC107726146,LOC107702491,LOC105030507 other downstream 317572 12256782 ~ 12304689 (-)
txndc5 txndc5,LOC107730007,LOC107678545,LOC107557239 other downstream 1003181 11582132 ~ 11619080 (-)
G162152 LOC107550009,LOC107709778 other downstream 1269402 11352061 ~ 11352859 (-)
dpp6a dpp6a,dpp6,LOC107755713,LOC107664663,LOC107655790 other downstream 1612013 10666511 ~ 11010248 (-)
zgc:174877 zgc:174877,LOC107687531,LOC107709772,LOC107588023 other downstream 2163785 10451559 ~ 10458476 (-)
LOC122329483 jph1a,jph1,LOC107596049,LOC107758817,LOC107740042,LOC107589924,LOC107657819,LOC107693808 other upstream 100579 12834778 ~ 12888181 (-)
G162538 neto1l,LOC107727239,LOC107589957,LOC107662554,LOC107657816,LOC107741667 other upstream 615055 13349254 ~ 13350231 (-)
prdm14 prdm14,LOC107758806,LOC107589925,LOC107693801,LOC107740123,LOC107596036,LOC107758803,LOC102787367 other upstream 910221 13644420 ~ 13648208 (-)
trpa1b trpa1b,LOC107754209,LOC107667585,LOC107589932,LOC107657811,LOC107724420,LOC107596046 other upstream 1181041 13915240 ~ 13940226 (-)
ube2wb ube2w,flj11011l,LOC107725703,LOC107691409,LOC107657829,LOC103354920 other upstream 1673563 14407762 ~ 14417444 (-)

Expression


Co-expression Network