G19312


Basic Information

Item Value
gene id G19312
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11500217 ~ 11500514 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21700
AGTACACCCCCTTTGAAAAGTAACATTTTAAACAATATCTCAATGAACACAAAAACAATTTTCAAAATGTTGACAAGACTAAGTTTAATATAACATCTGTTTAACTTAAAACATGAAAGTGAGGTTAATAATATAACTTAGAGAACAAAATTTTCAGTTTTACTCAAATTAGGGTGATGCAAAAATGAGTACACCCCACTGAAAGTCTCTGGAGCAAAGCTAAATTTTAGACTACAAATGTCTAATTTAACAAGAATTCAAGCACAGGTGAGTCTAATTCTTCATTACACAGGTGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21700 True 298 lncRNA 0.40 1 11500217 11500514

Neighbor

gene id symbol gene type direction distance location
CI01000001_11440491_11445508 NA coding upstream 54677 11439979 ~ 11445540 (+)
CI01000001_11431153_11431434 NA coding upstream 68630 11429876 ~ 11431587 (+)
CI01000001_11359106_11376288 NA coding upstream 123332 11359106 ~ 11376885 (+)
CI01000001_11265638_11283027 MASP2 coding upstream 216981 11265638 ~ 11283236 (+)
CI01000001_11246797_11247315 CORT, SST3 coding upstream 252676 11246649 ~ 11247541 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding downstream 155515 11656029 ~ 11661866 (+)
CI01000001_11756218_11760009 NA coding downstream 255647 11756161 ~ 11761497 (+)
CI01000001_11809724_11812692 LZIC coding downstream 308913 11809427 ~ 11813444 (+)
CI01000001_11898621_11898914 NA coding downstream 397783 11898297 ~ 11900188 (+)
CI01000001_11990189_11991073 AURKAIP1 coding downstream 487563 11988077 ~ 11991195 (+)
G19266 NA non-coding upstream 6361 11428104 ~ 11493856 (+)
G19259 NA non-coding upstream 110359 11389555 ~ 11389858 (+)
G19258 NA non-coding upstream 112258 11387643 ~ 11387959 (+)
G19108 NA non-coding upstream 118230 11381574 ~ 11381987 (+)
G19096 NA non-coding upstream 196193 11255069 ~ 11304024 (+)
G19349 NA non-coding downstream 168450 11668964 ~ 11670995 (+)
G19394 NA non-coding downstream 180193 11680707 ~ 11680946 (+)
G19351 NA non-coding downstream 182043 11682557 ~ 11687675 (+)
G19362 NA non-coding downstream 189411 11689925 ~ 11690609 (+)
G19411 NA non-coding downstream 256083 11756597 ~ 11758207 (+)
G19039 NA other upstream 646234 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 960371 10538388 ~ 10539846 (+)
G18937 NA other upstream 1023828 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 1103512 10394851 ~ 10396705 (+)
G18872 NA other upstream 1218848 10271146 ~ 10281369 (+)
G19314 NA other downstream 680 11501194 ~ 11558673 (+)
G19395 NA other downstream 180808 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2012890 13514115 ~ 13517063 (+)

Expression


Co-expression Network