CI01000001_13514115_13517063


Basic Information

Item Value
gene id CI01000001_13514115_13517063
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 13514115 ~ 13517063 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_13514115_13517063.mRNA
CGCTCTGGAAGCAGTAAGACCAGCACAAGTCCTACAGAAAACTATCAGCTGGCTCGGAGACGCACACTGCAGGTGGTGGTCAGCTCTCTGCTGACAGAGTGTGGCTTTGAGAGCGCTGAGAAAGCTGCGGTGGAGACACTCACTGAGATGATGCAGAGCTCTCCAGTAACAAATGCTCCAGTGGTCCCAAAAGCCCTCACGGCTGGACAGAAGCGCACTCATCCAACACACATTCCCAGCCACTTCCCAGAGTTCCCAGATCCTCATACATACATCAAAACACCAACCTTTCGAGAGCCTGTGTCAGATTACCAGGTGGTGAGAGAGAAGGCAGCATCACAAAGGAGAGATGTGGAGCGTGCTCTCACACGCTTCATGGCCAAGACCGGAGAGACGCAAAGCCTTTTTAAGGACGACATCAGTGCATTTCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_13514115_13517063.mRNA False 433 mRNA 0.53 3 13514115 13517063

Neighbor

gene id symbol gene type direction distance location
CI01000001_13470823_13478394 NA coding upstream 35717 13470670 ~ 13478398 (+)
CI01000001_13342394_13343095 NA coding upstream 170331 13342093 ~ 13343784 (+)
CI01000001_13329841_13334948 NA coding upstream 178813 13329841 ~ 13335302 (+)
CI01000001_13309045_13319725 NA coding upstream 194236 13309045 ~ 13319879 (+)
CI01000001_13301404_13306593 TPX2 coding upstream 207522 13301404 ~ 13306593 (+)
CI01000001_13524372_13525844 NA coding downstream 6398 13523461 ~ 13525863 (+)
G19860 NA non-coding upstream 26649 13482574 ~ 13487466 (+)
G19883 NA non-coding upstream 43556 13466543 ~ 13470559 (+)
G20007 NA non-coding upstream 114978 13398792 ~ 13399137 (+)
G19996 NA non-coding upstream 130599 13383118 ~ 13383516 (+)
G19993 NA non-coding upstream 132247 13381631 ~ 13381868 (+)
G20024 NA non-coding downstream 1172 13518235 ~ 13518461 (+)
G19843 NA non-coding downstream 1677 13518740 ~ 13519098 (+)
G20025 NA non-coding downstream 4707 13521770 ~ 13522117 (+)
G19395 NA other upstream 1832298 11681322 ~ 11681817 (+)
G19314 NA other upstream 1955442 11501194 ~ 11558673 (+)
G19039 NA other upstream 2660132 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2974269 10538388 ~ 10539846 (+)
G18937 NA other upstream 3037726 10474984 ~ 10476389 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00014034 taf8,LOC106572622,LOC107756368 coding CM030125.1 CM030125.1 49689679 ~ 49694164 (-)