G20007


Basic Information

Item Value
gene id G20007
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 13398792 ~ 13399137 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22467
TTCATTTGCTTCATGACCATGTGGTCCTTTGCAGGTGTCTGAATGATGTCACATCCTGTCACATGATACTGACCGCATGACTTGATCCAAAATAGTCCCTTTATATTGGTTACTCTGAATGACATCAATGAAATTCATTTTTCCGGACCTTCTTTCTCATAACAAAGCAACGACTTCTACACATAATTTTAATGCCATTTTGCACTATGTTGATATATGATGTTATAAAATCATGCCAGAATAAAAAATATATACATTTATTACATTTTAATCACAAATGAAATGGCTGTATTGGCCTTTGGACGGTTAAACCGAATGACCTTTTGACACTTCAAAATCTTTAAAA

Function

NR:

description
PREDICTED: pleckstrin homology-like domain family B member 2 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22467 True 346 lncRNA 0.34 1 13398792 13399137

Neighbor

gene id symbol gene type direction distance location
CI01000001_13342394_13343095 NA coding upstream 55008 13342093 ~ 13343784 (+)
CI01000001_13329841_13334948 NA coding upstream 63490 13329841 ~ 13335302 (+)
CI01000001_13309045_13319725 NA coding upstream 78913 13309045 ~ 13319879 (+)
CI01000001_13301404_13306593 TPX2 coding upstream 92199 13301404 ~ 13306593 (+)
CI01000001_13297434_13300865 TRAPPC6B, GM13880 coding upstream 97927 13297434 ~ 13300865 (+)
CI01000001_13470823_13478394 NA coding downstream 71533 13470670 ~ 13478398 (+)
CI01000001_13514115_13517063 NA coding downstream 114978 13514115 ~ 13517063 (+)
CI01000001_13524372_13525844 NA coding downstream 124324 13523461 ~ 13525863 (+)
G19996 NA non-coding upstream 15276 13383118 ~ 13383516 (+)
G19993 NA non-coding upstream 16924 13381631 ~ 13381868 (+)
G19878 NA non-coding upstream 19186 13377640 ~ 13379606 (+)
G19990 NA non-coding upstream 102458 13295976 ~ 13296334 (+)
G19864 NA non-coding upstream 156665 13241470 ~ 13242127 (+)
G19883 NA non-coding downstream 67406 13466543 ~ 13470559 (+)
G19860 NA non-coding downstream 83437 13482574 ~ 13487466 (+)
G20024 NA non-coding downstream 119098 13518235 ~ 13518461 (+)
G19843 NA non-coding downstream 119603 13518740 ~ 13519098 (+)
G20025 NA non-coding downstream 122633 13521770 ~ 13522117 (+)
G19395 NA other upstream 1716975 11681322 ~ 11681817 (+)
G19314 NA other upstream 1840119 11501194 ~ 11558673 (+)
G19039 NA other upstream 2544809 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2858946 10538388 ~ 10539846 (+)
G18937 NA other upstream 2922403 10474984 ~ 10476389 (+)

Expression


Co-expression Network