G19860


Basic Information

Item Value
gene id G19860
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 13482574 ~ 13487466 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22306
CTGGCTTCACATTCCAGTGGTACTCTGTTGTGTATACACTAACAATTATCATGTTACACACAGACAGACACACAGTCGAGTACACTAACTGTTGTCCTATATCACCGATTGTTGGTTATAAGTTATATCTGTTCCATATACATATATATTTCCATTTGTCAACAACTGGTGGAGATTTCGATGCATCAAGCTGTAACACAGAGGTAGGATAATGCTACTTAAAATGCCTCACGTTTCGCTAATTCTAAACCATTGTGTTGGCGACACTGCGGGTATGGGTCAGACTTGAAGCGGCAAGCAAGTCGTAATCTTATTGTTTGATATGGAATTGGTGTGATGTCGTAGACCCTGCAATGGTCCCAGGCTTCTGCTGGTGATGGTATCTCCTACACGTTCAACTTAAAGACAGGATAAGAATATTTGCAGATATGTCGATGAGGTATACAGGGTTGATATGACCCCTGTTTGTCGCACTCACACAACACATACACACTGGGTGCTGCCCTACACGATCGTGACTATATTTCCATCGTCTAAACATTAGCAGAGAACAGCTTGGGGTTCAATACTCAAGTAAATAGTGCAGTTTTGTTTCGTTTTTTTTTTTTTTTTATTAATCAGGGTCACATTTCCTACACGTCATAATGTGTTTCCGTCACATCACCGAGTCAAATACTTGGCATGTTCAAGCAGAGCTTGGAAGCAGAGACCGTAACCCTGTTTTATCGGAAATACGAGTCTTTCATCTATCCCAGCCTTTCGGTTCTGCATTTTGGCGATGGAAACGTAGCCACTGTGTAGTATTTTTGCTTTTTTTTTTTTGTAACAGCAATCTTTTGGAAAGTCTTAAAGACGGCGGGTCCTAGTGAAACTGGATTCAAACACGGAACGCAGGAGGTCCGCTCGATTAAAGCCAGTCGCTTTGAAATGGCCAAATCCTGCACACATCCAATTCACATTCAGTTTGACTGAAATAAGGCTCTCTCAGCACTGAAATCTCTTATGTTGGTTTCAGTTACAAGAAGAGGGTGTTAACCTAAGGTGCCACAGATTACATAGCCAGGCCAAAAGCAGCCAGAGCCAACAAATCTTTAGAAATATACAATTGTCTCTTGATACTTGTATTGCTTGTTCTTGAATTCATTCAAGTGGCCATCTCTACAGAGACATACATTGGTCCTATATTGTGAAATACTAGATTACTTTATTCAGTGTGCTCCCTGTGATATCAAATATGAAGTCATTGATTGCTTGAGGCCAAAATGAAAGAGCTTAAAGTAAGTTACTTTGAAGATTATTATATGACTTCTGGTATTGGCTGCCAATGGTATCTCTGTTTTGTTCTATGAAATTCAAAAGGAATGTTTCATTATGGTACAAGTTCCACTTTTTTTAATTTTTCTAAAATTTACAAAGACATGAAACAACAAATATTGGGATCTTGATGTCAGACAAAACACAAAACCTGATCCAAAGATCAGCAATGAAACGTTCTTTGGTACCGCAGAACATATGGCCCAAAGTTCAAATGTTGTGTGGGGAGAAATAAAAACCTGCATATTTCACTGGTGACAACAATAACATTCAAGATACCATTTCCAAATACAGCTATCACAATCTCTAATCCGAAAAAGAACTGTAATTCCTGGCAATGAGCTTTGCTTTTGGTATCAACTGATCAGAGGTAAATGAACAGGTCTAAACACCCCCCACACACACATACACAAATGCTTAACATGCCACAAAAAGCAGACACTGACTTTAAGTGGCGCAGAAGAAGGTTCATGGAAAACGGCACTCTCTGACCTATCAACCGATGAACAAACAGAAATGCCATCTTTCCAGTAAGCAAGAAGTATCGATAAGGCTTTGACACCTATCACAGTTTCCACCAAGTCCATTGTACATTCCACAAGAAAGTGCCACTTATGGAGGCAAAGCAGGAAGGAGTTCAAATTTGTACAATCCAAAAATAAAATAAATAAATAAGTGAAATTAAATACCCTGCTTAAAGGAAAAAAAAATATGATGGATAATGTAAGAGGGCATTTTCCTCCATTAAGGATACTATGGCGCACAAAAAAAGTTATTGCACTTCAGTCCATTTCAGGTGGATACTTTGACGTCAATACAACATAGAGAAAAGGAGTCATGCCAACATTCTACAAGACACTGGGTTACAACTAATCTCCAATGCATTACCACACAAAAACGACACGGCACACGTCTACTTCACTAAAGAGTTCACGCTTTGTAAAACTAAACACGTTTTTTTTTCATACAGAGTTTTAACAGGTCACTAGCTAGAACCGATCAAATGTTTTGCCATTATGGTTGAATTAAATTTACAAAGGTTTTTTTTTTATTCATTTGCGGTGATGTGACAAATTTGATCGCAAGTTTTGACGGCTCAAAACGCAACCTCGTGGATGGTGGCTATTTCTGAAACTTACAACAGTTGTTCATTCATAAGGCTCACTAAAGGTGTTAATGGAAGACCATACCCTGTGGCATGTACTTGATAACAAAAGGCACAATCCCACATACTCGTCACAAAGTGTAGTACTTTAAAGAGATGATGAAGATGCTTGCAGACTCCAAAGAAATAGCAGCATGCCACGCAAAGCAGTCATTTTCTCAACCGAAGCCAACAAGCAAGTGAGGTCGGTGTTAGATTTACAGATGAACTTCTGAAGGTCCGTGATCGGTCAATGAAGCTCTTGGGCTATCTCTGGTGGCACTATGCAACTCTGTGAGATAAAAAGAAAAAATTCCTGCATAGCTTTTTTTTTTTTTTTTTTTTTTAAATATGAAAATGTATTTTAAAGGGATCCCTATGTGCCCTGTCAGATCAACCATTCAGTCAGGCTCCGGTGGTCTTCTAAACAGCCTTATGAAAACAAGCTGCTGGCGAGAACAACAAAAAGCAGCTTTTTTGACTAGATCATTCGCTTGCAGATTTACAATTTAAACTATTAGCGCTTATAAAGTAGAAACGTGAAGTAACACTAAGCCAGGGTGAAGGACATCATTTAAGTTCAAGAGCACCCCTTGAAAACTCCAATGGTTTTCCATTTCAAGGCCTTGGAACGTGACCTCAGGATTCTAGTTGCACGGATCATGCGTAGCTAAAAAGCCCACCCAAATTTCATGTACCAGTATATATAGCACGATAGATTTTAAGGACTGCTAGTTCATGAGGTAAGATTGCCACGTCAAGGCAATTCCAACCACACTTGAGGAATTACATCTTGCACATCTTCTTGTGCTTTTGTTATTTAACTTATTAGAAAGATTTGCATTTATAACATTACACAACCTAAATATTTCAATCAAGACACTGAAAAATGAGGACATAATCTAACCTGTTTTGCAAAAAGAATTTATCATTGGATTATATTTACTTGTTTGAGATGTATCTCCAAAATCATTCCTGTTTCAATACTGATTTTTTTTTCCCTGCTACTTTCCATTATGGTGTTTTTATAAGTCACGTTCAAGAGTGAAAATCAGTACTTTTGTCACTTCATTTAGGAGAACTAAATCCAACACGATTTTTTTTTTTTTCTCCTCAAAGAGTTTCTAGTTTCATGGTAAAATATTAGCCGTTCCAAATTATTTCAGGTAAATACACAAGTATTAAAAAAAAAAAAAAAAAAAAAAAAAAGACAATTTTTATTTTTTCTATATTCTAGTGCAAAAACTCCTAATATATTTAATGAAAATGATTAATTTTAGGCGAGAAGCCAGTATGGTACATCTTTCAGCAAAACTGTGTGCTTATGAATCTCATCGAAATGAGATCCCAGGTTAACAACAAAATCTCTCACAAGTGCTGCGACTGCTGAACTATACCGTTTCCTCTTAAGGCAAAAAGTTGGGAGATAGACAAAGGTTAAATGAAACGGGTGTTTTGAGTATTGCCTTAAATGGATGTGTCTTCAAGTAGTAGGGACGCTGAGGTCCGCTGAGGTAAATCAGACATTCTATCAGCCATTAATACCTTTGCGAGAAAAACAAATGATATCGATACAAATATGCAAGGATTGACATACAATAAGGACACTGAGTTAGCTACAATTAATCTGCTTTCCAACAAAATGGTTACAATTATTAGACAACTCTAGTTTCCAACTGCCTGCAAGTAACTGCAACCATTATAGCTTGGTCAACAGGCAATGAAAGCTGGCCCTTCATAGCAAAGTTGTGTAAAAAACAAACACAAAAAGCTCCTAAAACTGCACAATTTGTTGATCCAGAATAAAACGAGAAAAGCTAGGTAAAGTGTGTCGTTTTGGTAAATTTCAAAATTTGCCCTTCAGTTAATAATGAAATTAAGGCGCTTCATAATTCCATTGCGTAGACATAAACCTCAAATTATCAATGGTTCGTGGGTATGCTCGATTACAATGGAAGATTTATAAAATATTGTTTTTGAAGGAGCCGTTGACTGAATGACTCAAATCCGGCTATTCGATTGATAAGGGCAAATGCCAAGTTATGGCTTAGCCATGAAAGCTTTCACTTAAATGGGTGAAGAGGAGCTCCACGAAGAGCTAACCAGCCCATCAGTATAGCTTAGTTAAGAATATACTGGCATTTTGAGACAGTCTGATTGTGAACGTACTGGCATTTTACAAAAATTAACACACTATGTGGATCTCCAAAAAATATATATAAATGGGCACAGTAGCTTATGTTAGCTTAGACTTCGTTCTTTTTCTTTTTTTTGGTAATGGTCTTGATGCACACTCAAAAACTGAACCCAAGGAATCATTCATTCACATTTTACAAATGTATCATAATGAGAAAGGGAAAAGAAAAGTTATGGCACTAAATGATTTTAGGGAGGAAACTCCCCTTTATAAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22306 True 4872 lncRNA 0.37 2 13482574 13487466

Neighbor

gene id symbol gene type direction distance location
CI01000001_13470823_13478394 NA coding upstream 4176 13470670 ~ 13478398 (+)
CI01000001_13342394_13343095 NA coding upstream 138790 13342093 ~ 13343784 (+)
CI01000001_13329841_13334948 NA coding upstream 147272 13329841 ~ 13335302 (+)
CI01000001_13309045_13319725 NA coding upstream 162695 13309045 ~ 13319879 (+)
CI01000001_13301404_13306593 TPX2 coding upstream 175981 13301404 ~ 13306593 (+)
CI01000001_13514115_13517063 NA coding downstream 26649 13514115 ~ 13517063 (+)
CI01000001_13524372_13525844 NA coding downstream 35995 13523461 ~ 13525863 (+)
G19883 NA non-coding upstream 12015 13466543 ~ 13470559 (+)
G20007 NA non-coding upstream 83437 13398792 ~ 13399137 (+)
G19996 NA non-coding upstream 99058 13383118 ~ 13383516 (+)
G19993 NA non-coding upstream 100706 13381631 ~ 13381868 (+)
G19878 NA non-coding upstream 102968 13377640 ~ 13379606 (+)
G20024 NA non-coding downstream 30769 13518235 ~ 13518461 (+)
G19843 NA non-coding downstream 31274 13518740 ~ 13519098 (+)
G20025 NA non-coding downstream 34304 13521770 ~ 13522117 (+)
G19395 NA other upstream 1800757 11681322 ~ 11681817 (+)
G19314 NA other upstream 1923901 11501194 ~ 11558673 (+)
G19039 NA other upstream 2628591 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2942728 10538388 ~ 10539846 (+)
G18937 NA other upstream 3006185 10474984 ~ 10476389 (+)

Expression


Co-expression Network