G19990


Basic Information

Item Value
gene id G19990
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 13295976 ~ 13296334 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22450
AAAAAAAAAAAAAAATGCACACACATAGGGTAAGTGTGGCGTGGGCGTGGCAGCCTGGGCTTTGCACTGGGCTGGTTCCATGCTACACGCCATGCTTTTTTAATGCATTATACACTAGTTGACATAAACATATCATGAGTATAACAATGAAAGCAGCCATATTTATTAAAAAAAAAAAAACAACACAGACAGGGTAAGCGTGGCATGTGTGGGACGGCTGGGGATGGGTATGGATTTTGGGACCCTCGGCCCCGCAGCACCGCACCTTGATAGCCCGTTGCAACATGACGCTGACGGGGGTCTATCCTATGCCATGGCCATGAGGGGAATAGAGGCAGCTTTATAATATCTTATTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22450 True 359 lncRNA 0.28 1 13295976 13296334

Neighbor

gene id symbol gene type direction distance location
CI01000001_13290327_13291466 PLAGX coding upstream 2497 13289607 ~ 13293479 (+)
CI01000001_13266612_13285039 PAN2 coding upstream 10683 13266543 ~ 13285293 (+)
CI01000001_13242387_13245977 NEMP1 coding upstream 49731 13242387 ~ 13246245 (+)
CI01000001_13235608_13240350 NA coding upstream 55535 13235608 ~ 13240441 (+)
CI01000001_13220895_13223877 ARMC1L coding upstream 71606 13220895 ~ 13224370 (+)
CI01000001_13297434_13300865 TRAPPC6B, GM13880 coding downstream 1100 13297434 ~ 13300865 (+)
CI01000001_13301404_13306593 TPX2 coding downstream 5070 13301404 ~ 13306593 (+)
CI01000001_13309045_13319725 NA coding downstream 12711 13309045 ~ 13319879 (+)
CI01000001_13329841_13334948 NA coding downstream 33507 13329841 ~ 13335302 (+)
CI01000001_13342394_13343095 NA coding downstream 45759 13342093 ~ 13343784 (+)
G19864 NA non-coding upstream 53849 13241470 ~ 13242127 (+)
G19880 NA non-coding upstream 54735 13240840 ~ 13241241 (+)
G19979 NA non-coding upstream 87003 13208625 ~ 13208973 (+)
G19972 NA non-coding upstream 92204 13203550 ~ 13203772 (+)
G19970 NA non-coding upstream 94343 13201432 ~ 13201633 (+)
G19878 NA non-coding downstream 81306 13377640 ~ 13379606 (+)
G19993 NA non-coding downstream 85297 13381631 ~ 13381868 (+)
G19996 NA non-coding downstream 86784 13383118 ~ 13383516 (+)
G20007 NA non-coding downstream 102458 13398792 ~ 13399137 (+)
G19883 NA non-coding downstream 170209 13466543 ~ 13470559 (+)
G19395 NA other upstream 1614159 11681322 ~ 11681817 (+)
G19314 NA other upstream 1737303 11501194 ~ 11558673 (+)
G19039 NA other upstream 2441993 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2756130 10538388 ~ 10539846 (+)
G18937 NA other upstream 2819587 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 217070 13514115 ~ 13517063 (+)

Expression


Co-expression Network