LOC122331676 (LOC107577476,LOC107573278)


Basic Information

Item Value
gene id LOC122331676
gene name LOC107577476,LOC107573278
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 102202 ~ 105851 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229181.1
AAAGTTTTCAGACTCCTCTCTCCCTCAGGCTGAAAGCTGCTCTGTAGGACCAGTGCTGCAGTCAACGCTTGTCCAGtTGCAGGAGTGTTTCACTAAGAACATCTGTGTCTTTCTAACAAGAGAATAACTAAAGCAGGTTTAGCCATAATGCAAGGCATTGTTCCCAAGAACCTACTAAAAGGGGTTGATATCTGTGGAGGGaaaacacagatatatataatCCGCTCTGATATTGGCTGCTACATGCAGACAAGTAATTTGAATAAAGGTTTAGACCCCACTATTTTCAGTCTGCATCCCTCCTGCCAGAATGGAGACCATTATCTTGCTGATTGGAATGAAACCTTTTACGTCATTAAGGGTGACTCCTTTCGCGAGGTCAAAGACCTGTCAACAGACAGCGAGGCTAAAGTTCTCAGTCTTGATGAAAACTGCGTGGGTGGGGACTTCTACTTCTCAGCCGGTGGCTGGTTTTACATCATCTTCCTAGCAAAAGGAACTTTTCGTCAGACAACAGaccttaataaatatacatatggtGAAGAAAAATCACTGCGTTTCAATTGGTTCAGTGGTCTCTATTACTGGGGTCAGTCAAAGAGCTTCTGCTTCCTCAAGCCATTCTCAAAGTGGGGAGTTGAATACAATGAAGGCAACAGCATAGCGGATAATAGCTGTTTCGATACCTATTCTGTTCATCCCTCTGTTGTTAACTTCCTGCCTGGTGGGCTATCAATAACTAAGGGGCCAGCATTCGGTAGGTGGGAGAATATCAAAAGTGCAAGTAATGACAGTAAAACAGCAGTGACATGGCACAAGAAGGTTGTTAAAAAGGTTGGATACAGTAAGGAGAAGATAACAGACATCACACATAACTGGAAGTTCGGCATGTCAGCCACGATTGCATCTGGAGTCCTGGAAGGGTTAATCGCGAAGCGGCAGTTCTCATTTTCTGCAGAATATGGAGGATCACATGTGAACACTGAGAAAGAAATCTGGCATGAAGCCACCGAAGTGGAAGAACAGCTTTCATTTGAGCTAAAACCAAATGAGCGTGTGTATCTGTGGCAGTACAACCTGGGTCTTGGTGAAGAGTCTGTGTTGTTCTGTCGTGATTTGAAGATGGACGATGTGCCGAACCCTCCAACTGAAGTCCCACTGCCTCCTGCAAAACCATGAGAAAAATATAACCAAGTGCTTCAGCTAAACCATATTTAGTCAGACACTAAGTGGTACTATAAGAGCCTTTTGCTCTGTGATTCAGAAGGGCTATAAGCTTCTGAATGCTGAAAACATGctctataaaataatataacatctATAAAAATTTTCTGCTATTTTGAATCTTCCAACAAaaatttgtctttttcattctttgtcTGATTGTTAGTATGGTGCGATATTTCTAAAGAAAGTTTGATTGCAAAAAGCTACAAATTGAAGTTTCTACAAGTTTCtacaatgaatgtatttattacagaaactttatatatttaatatttagtaattctGTATGTTATCAGAATAATGTAACTGATTTGTAATTTACCATTTTCAAATTCATGAACTTGTACCCTGATTGTCTGAAAAAGTTTGAAACCTGATCAATTCAAATTACTGAGTCtatattttaagtttgtttatcaCTTCTTTTCTGTGTGGTTTCTTTATTCATCTAtccagtttaatttaataatgtactaTGAGTaatctgcatttaatatatatttactagaTTTTAAATTCTAGTGTGTCTCTAATGCATTGTCCAGACATAAAACGATTCAGTATCTAAATGCAGATAGTAGTTGAATGACAAACTCCAAAATAGTAACCCAAAGAAGAACAGAATTCCAGGAATATTAATCAAGAACTGTAAACACATCAGTAACCAACAAGGGCAAACAGTGGGATATAGTTACAGGCtacaagtacatttatttatcatttgtgCAAAGTGACTTACAGATGTGGCCATTAAGAATGTTAGCTTTTTAGCAGTTCGTCACAGGCGACCAAAGATCTCCACAGTCATAATTTGAGATGTTTACTAGTATTGAAACCATAGTTAACAGATCATGAAGACTGGACAAGTTTCATAGTCCATAGATGATTTTCAAAGAACTTGTTCTATTACACTGTCCCCGCGTACTGTATTTTGATGCAGCTAAATTCTCAATAAAACAGTTTGTCTTGTTTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107577476

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229181.1 True 2200 mRNA 0.38 3 102202 105851

Neighbor

gene id symbol gene type direction distance location
LOC122331675 NA coding upstream 6153 90740 ~ 96049 (+)
LOC122331678 NA coding upstream 17262 78538 ~ 84940 (+)
LOC122331436 NA coding downstream 6785 112636 ~ 117323 (+)
LOC122331677 NA coding downstream 84614 190465 ~ 199495 (+)
LOC122331674 LOC107720835 coding downstream 108540 214391 ~ 240527 (+)
LOC122331682 NA coding downstream 144497 250348 ~ 252445 (+)
LOC122331680 NA coding downstream 148196 254047 ~ 258523 (+)
LOC122331687 NA non-coding upstream 32975 68656 ~ 69227 (+)
LOC122331484 NA non-coding upstream 81150 14053 ~ 21052 (+)
LOC122331688 NA non-coding downstream 126316 232167 ~ 232680 (+)
LOC122331684 NA non-coding downstream 159610 265461 ~ 267131 (+)
LOC122331685 NA non-coding downstream 170884 276735 ~ 278406 (+)
G170304 NA non-coding downstream 303653 409504 ~ 720610 (+)
G170306 LOC107747346,LOC107729629,LOC107559521 non-coding downstream 307997 413848 ~ 417172 (+)
LOC122331683 NA other upstream 25065 75300 ~ 77137 (+)
LOC122331690 LOC107575684,LOC107720835 other upstream 40526 41422 ~ 61676 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other downstream 686786 792637 ~ 799271 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other downstream 943241 1049092 ~ 1059050 (+)
G170357 NA other downstream 999226 1105077 ~ 1105891 (+)
G170431 NA other downstream 1245825 1351676 ~ 1352642 (+)
LOC122331738 NA other downstream 1357786 1463637 ~ 1485385 (+)

Expression


Co-expression Network