G170304


Basic Information

Item Value
gene id G170304
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 409504 ~ 720610 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU252233
tccatttgcagacttttattgagcaaaggcatggtcaaagcagacAGGCGTCAAAACGCAGCAAACAGGAGTGTAAGAggcaaggcaataacaaaatccaaaaacaggcggAGGTCGGGTCAGGtagcaaacaatcacagtatcagaagacaggcagggTCAAAACGCAGCAAACAGGAGTGTAAGAggcaaggcaataacaaaatccaaaaacaggcggAGGTCGGGTCAGGtagcaaacaatcacagtatcagaagacaggcagggtcaaaaccaaagaatctaagaCTCGGGAAACAACAATCAAACGACAATCCAACAATAGTACAATggaacctgcaggtgaggggcctacaACAGTATTTATAGAGTTTTAACAggagtagcagcagaggagtgatcacagatcacccagaggtaagagccctctgctggcttggtgacactttgaaatatgtatgtacagtTACTCTTTCCTATATTTATGGGAACCAAATTCCAAGGACCAGAACCTCgataaaacacagtttttttcatcaaattattttgtggatacagtaaaataatgtcATCCTTACTCGCTTGATGTGTTTTAGAATCATGTCTAAGTCACACATTAACAagttttattaaagaataaacAAGGCGTATGATACTTCAATAccttatgaataaatactaacgatcataaatttaatttaaccttcAACTGCAGCCATGACAACTTTCACTAGCATTGACCGGAAGGGATAATGAAGCACTAGCCTGGCTGTTCTGTTCTGAACCatctaaagtattttttaatggtttctcAAATGCACTTAATTATACAATAGGCAAGTACTCAAGATGTAATCAAACTAATTAATGtaccacattttttaaaagtgtgaatGAAAGGTTGAATTCATTAAACATCCGTTCCTGTCTTCACCCCTGGATCCTGTCTGCCCCGCTGTTCACCCTCAGTCCGCCATTAGTGTGCTGGATCTGCCActggtctgccagtctccatcagCCTCTGCCTTGACACCTATATTATATCTTCATATATGAATTAATGACATTGTAGTATATTATTACACCACTCAAATATGCTGTCAGTGCTTGTTTAGTTTATATTGACCTTTATAAAATGGGAAAAGTGGCCTGCATGAAAGGGCTTAACTAGAACAAAAATAGTTGATTACTAGACAATCATTTCATGAGAGTGGCATAATCCAGTAAAATATGTTCTTTAAGGTGTGCAGGTCAAATTTACCCGCTTTTTACCTGGTTTTAGAAATATATTGACCCCTCttgatgttttgtttacttCCTTGTTACCTTTAATTCCCACATGTTGTCACACAATCTCAGGTACAATGGAACAATGATGATCATTTATTGGAACAGAGAACTGAAATAGGCGATGGCTAAGAATTTAGCTGAGTGTATAGTGTATGTCCACAGGAAACGGTGTCCACAATCTACAGAGCATAGAGGGTCAAGGGTAGTAAAGGGGTGTGAATGGTAGATCTTACGAAGCGCAACTGAGGGAGTGTGGTATTTTAGGAGTGTCTCTAATGAGCAACATGTGAGGGTGATTAGTATTGTGGGGATGATGATCTGGTGGGTGGTGCTTCAGAGGGAGGTGACTGTGGTGAATGCCTGACATTACCCCCTCCTCCATAGGTCTTTCCTTCTGGACATTCTGACGGTGCTGGCTCCTGGAGGGTTGCTTGTTGGATCTGTTGATCTAATTCCCTTATGATGGGGCTGACAATGAGAGTGTCGGGAATGATGGGTTCCAGTTTGTTGGATGAATCAGTAGTATATTGGCGTGAAAGTGCATCTGCAGGAATGTTCTTGGATCCGGGTCGATAAGTAATCTTGAAGTTGATGTGTGTTAGAAAAAGAGCCCAGCGTGCTTGATGGAGATTGAGTCTCTTAGCCTCACGGATGTATTGCAGATTCTTGTGGTAAGTAATGATCCTGAATGGATGAATGGCACCCTCCAGGCAGTGTTGCCACTCCCCCAGGGCTAATTTGATGGCCAACAGGTTTCCCACATCATAGTTTTGCTCTGCCGGTGACAGCTTGTGGGAATAAAAGGCACAGGGATGGAGGAGCGAGGAATCATCAGCCGCTTGGGAAAGCAAAAGGTCTTCTTTAGATAGAGGAAAGCTTCGTGGGCAGAGGGGCACCAAGTCAGGTGTTTCGGTTTGCACCTCAGAAGGGAAGTCATCAGGGCAGTGATAGAACTGTAGTTCTTGATGAAACGATGGTAGAAGTTAGCAAAACCTAAAAAGCGTTGGAACTCCTTGATTTTGATGGGTTCTGGCCATTTGAGGACTGCATCGACCTTCCCTTTGTCTATTTGCACACTCTCGACACTCATGTTGTATCCAAAGAATTGAAAAGATGATTTATGGAACTCCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252233 True 2424 lncRNA 0.42 2 409504 720610

Neighbor

gene id symbol gene type direction distance location
LOC122331679 NA coding upstream 139506 268643 ~ 269998 (+)
LOC122331441 NA coding upstream 140842 267169 ~ 268662 (+)
LOC122331680 NA coding upstream 150981 254047 ~ 258523 (+)
LOC122331682 NA coding upstream 157059 250348 ~ 252445 (+)
LOC122331674 LOC107720835 coding upstream 168977 214391 ~ 240527 (+)
LOC122331454 LOC107747346,LOC107559514 coding downstream 32425 753035 ~ 765747 (+)
LOC122331500 LOC107559517,LOC107717910 coding downstream 291700 1012310 ~ 1013908 (+)
LOC122331707 LOC107747346,LOC107729629,LOC107559521 coding downstream 364378 1084988 ~ 1092383 (+)
LOC122331492 LOC107747346,LOC107729629,LOC107559521 coding downstream 378211 1098821 ~ 1104124 (+)
LOC122331697 NA coding downstream 419187 1139797 ~ 1144517 (+)
LOC122331685 NA non-coding upstream 131098 276735 ~ 278406 (+)
LOC122331684 NA non-coding upstream 142373 265461 ~ 267131 (+)
LOC122331688 NA non-coding upstream 176824 232167 ~ 232680 (+)
G170237 NA non-coding upstream 213459 16679 ~ 196045 (+)
LOC122331687 NA non-coding upstream 340277 68656 ~ 69227 (+)
G170339 NA non-coding downstream 138646 859256 ~ 873811 (+)
LOC122331487 NA non-coding downstream 406230 1126840 ~ 1130273 (+)
G170410 NA non-coding downstream 427249 1147859 ~ 1148205 (+)
G170415 NA non-coding downstream 454138 1174748 ~ 1175018 (+)
G170417 NA non-coding downstream 492071 1212681 ~ 1212913 (+)
LOC122331683 NA other upstream 332367 75300 ~ 77137 (+)
LOC122331690 LOC107575684,LOC107720835 other upstream 347828 41422 ~ 61676 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other downstream 72027 792637 ~ 799271 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other downstream 328482 1049092 ~ 1059050 (+)
G170357 NA other downstream 384467 1105077 ~ 1105891 (+)
G170431 NA other downstream 631066 1351676 ~ 1352642 (+)
LOC122331738 NA other downstream 743027 1463637 ~ 1485385 (+)

Expression


Co-expression Network