LOC122331492 (LOC107747346,LOC107729629,LOC107559521)


Basic Information

Item Value
gene id LOC122331492
gene name LOC107747346,LOC107729629,LOC107559521
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 1098821 ~ 1104124 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228931.1
attttaaacgcggtgtgtcagatagtgtaaatgacttaataataaaaagtgtgttggtgtgttatgtgtaggccaagttaaaaagatgtgtctttaatctagatttatgAAGCAGTCATGTTTTATAGATCGTAATCATAATCTAATCACTTTATCAAAATTAGcattgtttattaatcatttgaaagaataATCATGTCTTGTAAATGATTAGGTCATCATTAACTAATCACTTGTAAAGACTTgtacataaatgaacaaaacatacataaattgtTAGCATATCAGTAATtgctgatgaatgttttgtaaattattataaagtgttactgttatattgATTGAGTAAACTCCACAACAGACCTGCTGAGCATTTGGCATTACATCAGAACTGAAATGACAGGACAGCTTTCAGGAACTATTCTTCTCATTTCATTCAGGAATCTCGCAGGTGGagactgaaaataaagacaaactgAAAATGGCAGAAAGACTTTCTGATATACGGATTGTGCTGTTGGGCAACACTGGATCAGGAAAAAGTGCATCAGGAAACACCATCCTGAATGAAGCTTTTGATGCGAAAAACTCTACAGGATCAGTTACAGAAAACTGTATCAAACAAGAAGCAATTGTGGATGGACGCAGCATATCAGTTATTGACTGTCCAGGTCTGTTTGACACTCGAGATCAGAGTAAAGAAATGCTGCGACATGTAACGAGGCAGTGCATGAACCTATCTTATCCTGGGCCTCATGCATTTCTGCTGGTCATGAAACTGGGTGTGAAATTTACAGAGCAGGAGAAGAATGTTATAAAATGGATTCAGGAGAACTTTGGAGAAGATGCCATCAACTACACCATCATTCTGTTCACTCATGCTGACAAGCTGAACAGCAAGCCTATAGAGACATATATTGGTAAAAGCAATGAGCTAATGCAATTGATCAAGGCCTGTTGGGGAAGATATCACTCATTCAGCAATGAGAACAGAAATAATCGAGATCAGGTCACAGAACTTCTGCAAATGATACGtaaaatggttctttttaatGGAGGAAAGGAGTATGCTtttcagatatataaataaaagttaagcTAAAAGCTCAGCTTTAAAAGATTGCACCGAGTAGCATTTTGTGACGGTAAAACTACGTTTCTGTAAATTAGATCAGATTAACAAGCAGAATCACATTTTTGAGATTTGCTGCCTTTTTTGCTTGCCTTTATCACATGGCACACAATATACAATAACATTCACAGTAATGTTAAGAAAAATTTTATCacataatacagattttttttgtatgtttccgcctttcatttattttaaacagctgaTATTTTCCACTTAAAGTCCATTAAAGCACTGGCACTAGAACGTGATTGTATTTTGTCCTTATAAAcctgtgaaatgtatttaaatgatgtaCATTATTCCCCAGTGACCCATGCTTTGTGCCAAATATGAAGCATGATGTATcagattaaacacaaaataaagcctTTTGCATAACTGAA

Function

NR:

description
PREDICTED: GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228931.1 True 1521 mRNA 0.35 3 1098821 1104124

Neighbor

gene id symbol gene type direction distance location
LOC122331707 LOC107747346,LOC107729629,LOC107559521 coding upstream 6438 1084988 ~ 1092383 (+)
LOC122331500 LOC107559517,LOC107717910 coding upstream 84913 1012310 ~ 1013908 (+)
LOC122331454 LOC107747346,LOC107559514 coding upstream 333074 753035 ~ 765747 (+)
LOC122331495 LOC107741121,LOC107692853,LOC107574023 coding upstream 394832 702614 ~ 703989 (+)
LOC122331679 NA coding upstream 828823 268643 ~ 269998 (+)
LOC122331697 NA coding downstream 35673 1139797 ~ 1144517 (+)
LOC122331732 LOC107728143 coding downstream 136425 1240549 ~ 1242134 (+)
LOC122331720 LOC107558504,LOC107575635,LOC107711457 coding downstream 340102 1444226 ~ 1448004 (+)
LOC122331733 LOC107676291 coding downstream 344147 1448271 ~ 1452263 (+)
LOC122331725 NA coding downstream 350770 1454894 ~ 1457370 (+)
G170339 NA non-coding upstream 225010 859256 ~ 873811 (+)
G170304 NA non-coding upstream 378211 409504 ~ 720610 (+)
LOC122331487 NA non-coding downstream 22716 1126840 ~ 1130273 (+)
G170410 NA non-coding downstream 43735 1147859 ~ 1148205 (+)
G170415 NA non-coding downstream 70624 1174748 ~ 1175018 (+)
G170417 NA non-coding downstream 108557 1212681 ~ 1212913 (+)
G170418 NA non-coding downstream 110305 1214429 ~ 1220360 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other upstream 39771 1049092 ~ 1059050 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other upstream 299550 792637 ~ 799271 (+)
LOC122331683 NA other upstream 1021684 75300 ~ 77137 (+)
LOC122331690 LOC107575684,LOC107720835 other upstream 1037145 41422 ~ 61676 (+)
G170357 NA other downstream 953 1105077 ~ 1105891 (+)
G170431 NA other downstream 247552 1351676 ~ 1352642 (+)
LOC122331738 NA other downstream 359513 1463637 ~ 1485385 (+)
G170438 NA other downstream 359941 1464065 ~ 1510057 (+)
LOC122331718 NA other downstream 600454 1704578 ~ 1708360 (+)

Expression


Co-expression Network