LOC122331732 (LOC107728143)


Basic Information

Item Value
gene id LOC122331732
gene name LOC107728143
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 1240549 ~ 1242134 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229242.1
CCCagatattcacaaaatattttagatgttCAACTGAAAAGTCCGATATGAAAATCATATTGCTGTTCAATAAATTTGTCGAGGTGAGGTTAATGACTGAAGACTCCTCCCCAAAACACAGAGGACAAAAATGTGATACCACTTGATAGAAGATCTTCATATATCTTCATAAACATATTGGATTAAATACTAACAAGATTTGTGTCATTATACAAGCGCAATGAGTGAAAGGAAACATCATGAACGTAGCGAACATGATGAcgattgtaatgtaatttatacgAAACGGCAATGGGTAGGGCCACACCCTGTCGATTTCAATGTTTCAAGTGACATAAATAAGTCGTTGCTCAAAAGAGAAACGTGGAATATCAAAaaggaaatgaacaaaaaaccAAATATCCAACTTGCATCGGTCAATGTTGATTTGCTGGACACCATAAACGTCATTGACACATTCGACAGACCAGCAGATGCCAGCACAAAGGGCAGATATGCTCAGTGTGGAAAATATGCATTAGGCTTCGAAGACAAACCAGGACACCGGATTCCGAAGGCTGGAGTCTACGCGGAAGCAGGAGTGGGTCGTGTTGCTGCTGAAGTGAGTGTATTAGAGGCAGAAGCCAAAGGCCCGAACGCCTCGGCTGGGGTTGGAGCCAGTGTTACTGGAGCTGGAATGATGGCTCGTGCTGAAGTCGGCAGTGTTTCAGCCAAAGCCGGACCTGTTGCTGCAAAACTGGGACTTGGAGTTGATACAGGGGTATCTATTGGTGCGGGTGGGCTCGAGGCAAAATTCCTGGGAACTGGAATTACGTTTGGTCCAAAAACCAGTGTATCTCTGTTGGGCTCAGAGGTTTCATGTTCAGTCATGTAGTTGTTCGAGTTATCTTTGAATAGAGAGGGTAGGAGCTCGGTCACTCACTCTCCGCTGGCCTCGGAAttgctggaggaagtgtctggggagagggaagtctgggcgtccctgcttagactgctCCCCGCGACACGGCCCAGATAAGCCGAAGAAGATGGatgtcttttaaataaactaaggtttagagaaaatattaaattttataatgtaaaatgacatttattaacaataagtgttttatgattaaatacatCGAAAAAGTCATCTTAAAAAATACCATTattaatgatgatgattttttttattacctgtATAGTTATTCAAATGGTGTAAATGTTCTTTGTTCGcattacaatttattcattGACCGACATCTGTCGAGtgtcaatttaaattaaataaacctttCAGTTTAATCACCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107728143

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229242.1 True 1296 mRNA 0.41 2 1240549 1242134

Neighbor

gene id symbol gene type direction distance location
LOC122331697 NA coding upstream 96032 1139797 ~ 1144517 (+)
LOC122331492 LOC107747346,LOC107729629,LOC107559521 coding upstream 136425 1098821 ~ 1104124 (+)
LOC122331707 LOC107747346,LOC107729629,LOC107559521 coding upstream 148166 1084988 ~ 1092383 (+)
LOC122331500 LOC107559517,LOC107717910 coding upstream 226641 1012310 ~ 1013908 (+)
LOC122331454 LOC107747346,LOC107559514 coding upstream 474802 753035 ~ 765747 (+)
LOC122331720 LOC107558504,LOC107575635,LOC107711457 coding downstream 202092 1444226 ~ 1448004 (+)
LOC122331733 LOC107676291 coding downstream 206137 1448271 ~ 1452263 (+)
LOC122331725 NA coding downstream 212760 1454894 ~ 1457370 (+)
LOC122331467 NA coding downstream 243530 1485664 ~ 1489400 (+)
LOC122331723 NA coding downstream 286900 1529034 ~ 1531673 (+)
G170422 NA non-coding upstream 9494 1230846 ~ 1231055 (+)
G170418 NA non-coding upstream 20189 1214429 ~ 1220360 (+)
G170417 NA non-coding upstream 27636 1212681 ~ 1212913 (+)
G170415 NA non-coding upstream 65531 1174748 ~ 1175018 (+)
G170410 NA non-coding upstream 92344 1147859 ~ 1148205 (+)
LOC122331736 NA non-coding downstream 82920 1325054 ~ 1326906 (+)
LOC122331737 NA non-coding downstream 104998 1347132 ~ 1351373 (+)
LOC122331742 NA non-coding downstream 371572 1613706 ~ 1620957 (+)
G170504 NA non-coding downstream 710576 1952710 ~ 1953073 (+)
G170508 NA non-coding downstream 788092 2030226 ~ 2084111 (+)
G170357 NA other upstream 134658 1105077 ~ 1105891 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other upstream 181499 1049092 ~ 1059050 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other upstream 441278 792637 ~ 799271 (+)
LOC122331683 NA other upstream 1163412 75300 ~ 77137 (+)
LOC122331690 LOC107575684,LOC107720835 other upstream 1178873 41422 ~ 61676 (+)
G170431 NA other downstream 109542 1351676 ~ 1352642 (+)
LOC122331738 NA other downstream 221503 1463637 ~ 1485385 (+)
G170438 NA other downstream 221931 1464065 ~ 1510057 (+)
LOC122331718 NA other downstream 462444 1704578 ~ 1708360 (+)
LOC122331469 NA other downstream 781376 2023510 ~ 2029164 (+)

Expression


Co-expression Network