LOC122331718


Basic Information

Item Value
gene id LOC122331718
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 1704578 ~ 1708360 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU252472
TTTCAGCGACATCTGGTTTAATGTTGATCTAATGTAAGACTGTAGCATTTTATCTGACGTTAATGTGCGTTGTTTATTAGAGAAAGTCTTCTGATGaatcatattataataaactgTCAAAGTGAGTCCCGTGAATGAGAGAGTTTTCACTACCGTCGCTCTTTCTCTGAAAGTTGAACAAATTCCTGGTGAAGCAGCTGAGATCCATGTGACTTTTTAAAGATggcgtttattaaagaggagagcgAAGACTTCAGGATTGAAGAAGTGTTCA
>XM_043229225.1
ATCGGCTGAATAAagGTTGAACAAATTCCTGGTGAAGCAGCTGAGATCCATGTGACTTTTTAAAGATggcgtttattaaagaggagagcgAAGACTTCAGGATTGAAGAAGTGTTCAGTCTCAAACGGGAATGTACCGAGACACGAATAGACTTGTTGGCGCCGAAAGAGCAGAATGAAGATGTGAATGAAAACGACTGTTTCACAACCGAAGGGAAATCTTTTAGTTCGCAGCCCGAGGAGGCTTCCACGCAAAAAAGCGATCCGAAAGCGCACTTAATTTGCCAgcagtgtggaaagagctttGCACGGAAGAGCAGTCTCAAGATCCACTCgagaattcacaccggagagacgGCGTTGGCGTGCGGTCGGTGTTTAAAACGTTTTGCACAAGAAGAAACCTTTTACACTCACATGAGTCTCCACGCCGGAGGAAGCCCTCACGTCTGCGAACTCTGCGGAATAACCTTGAAACGAAAAGGAAATCTTAAGAGTcacatgagaagtcacactggagagaaaccgttCGCGTGCGATCAGTGTAAAAAACGGTTCACGCGTAAAGGAAGCCTCAGTAAGCACGCCAGGATTCATTTAAGAGAGAGCCGTTTCGTGTGTCATCTGTGTGCAGTGGGTTTCGAAGACATGAAACGACTTAAAAGGCACCTGGTAACTCACATCGGACGGAAGCCTTTTCTGTGTCACCGGTGCGGAAAGGCCTTCACGCACGAAGGAAACCTTAAGAGTCACGTAagaattcacaccggagagaagcctttcagCTGCCCACAGTGCGGAGTCGGTTTCACTGAAAAAAGAAGCCTCACGGACCACGTGagaatccacaccggagagaaacctttcACCTGCCAAgagtgcggaaagagtttcactCGGAAAGGAAGCCTCAAGGTCCACATGAGAATCCACAACAGCGAGAAACCTTTCTCCTGCTCGCTGTGCGAGAAGAGGTTCAGACATAAAAGAACGCTTAACATCCACGCCAGAGTCCACACCGGAGAAAGACCTTTCCCGTGTCTCCAGTGCGAAAAGAGATACGCGAAACGCGTCGATCTGAAAAGGCACGCGCGGTCTCATTCTGACAAGAAGCTGGCCGGATGCGCAGAGTGCGGGAAGACGTTTAAAAAAAGAGGCAGCTTCGAGAAGCACGTGTGCCTTCACTCTGGAGAGGTTAGGGTACCTTTGGGTCCTTGAACCACGTAAACAGCGGAGTCTACGAAGAAAAAAGTGTTAGTTCgttcaaatatgaaaattagcCTGCTTTACTCGACTCTAAAGCAGATTCCGTTATTCCGTATCCTAAAACTGTGGTTTGTATAGTCTCTAAATTCACTGAAATATAATGTCCTCCTATGAGGACACGGGGTCTTGGGAGGTTAAGAGCAAGTCAGTTCGGATGTCATATTCAAGAACGTTTATTTGTTGGATGTTTATGACGTGATATAGATTTCTgtacatgtaatcagttactagCCAGCGCTGCTCATAGTCTTCTCCTGAAACAAGGTTCTTCAGAAACGCAGAAGACTTTCTGCACAATGTGAAGTTTGAGGTAATGAGAGAAAACACCTGAACAAGAAGCTGCTCCTAAGGTGACTAAAGGAAGAGGAACAATCAAGGTgtcatgaaacatgaaaaaagtaATGACCACTGACAAAAGCACACttgtttactgaaaaaaaaaaaacataatgctgttattttcagccattatttttgcacttagtgtaaatagcatgtAATTAGAAAAGAAAGGATTAGCAGACTTGCTGATTGCTGGACATTCAGTCAGTAACCTTAGGTTGATGTCCATTCTTAAATATAGATCATTTATTCTATTGCCGGCTATCTAATGGCCACTTGTATAGACTCATTCACACAATATAGCCAATTATCGGATATTTTCACTGCAGGAACAGGTGTACATGAAGAATTTGCAATACGTTGCAAAAACTGCTCAGAAACATGACATGGAAAAAGATCAAGAAAACCAATGTCCCGCTTAAAACAGCAGCGCTCTTTAATTTTTCCCCTTCCTGCTACTGTTTAATGGATTAAAGTTTGTTTTCTGTCTTATTGCAGAAACTTGCTCTTCAAAGAGTGTACTTTTTCAGTGCAAGAGTCTGATTCTCCCATTACTCTCCCTCTGTCTTCAgtgctttttttgaaaaatgtatttaaaatgtatatttttgttcagcACCAAAATAAGATTCAACAGTGGCCGTAACATACTCTTGCAGCATAAATCAGGGGTGTCTGCTCAATCCTGCTCCTGGTTTCCCGATAATGTACTGAAGAGTTTAACTACAACCTGCTCCAACACACATGCTGGAGGTTTGTGGTGATCCAGATCTCTCTAATTAGCTGGCTTAATTGGGGttaaagctaaactctgcaggattgGGCACCCTAAGAGCAGAATTGGGCACCCCTGCCCAAAAgtgttactccaccccaaaaagTTCAATTATGTCATTAACTTACCG
>XM_043229226.1
TTAATGTTGATCTAATGTTGAACAAATTCCTGGTGAAGCAGCTGAGATCCATGTGACTTTTTAAAGATggcgtttattaaagaggagagcgAAGACTTCAGGATTGAAGAAGTGTTCAGTCTCAAACGGGAATGTACCGAGACACGAATAGACTTGTTGGCGCCGAAAGAGCAGAATGAAGATGTGAATGAAAACGACTGTTTCACAACCGAAGGGAAATCTTTTAGTTCGCAGCCCGAGGAGGCTTCCACGCAAAAAAGCGATCCGAAAGCGCACTTAATTTGCCAgcagtgtggaaagagctttGCACGGAAGAGCAGTCTCAAGATCCACTCgagaattcacaccggagagacgGCGTTGGCGTGCGGTCGGTGTTTAAAACGTTTTGCACAAGAAGAAACCTTTTACACTCACATGAGTCTCCACGCCGGAGGAAGCCCTCACGTCTGCGAACTCTGCGGAATAACCTTGAAACGAAAAGGAAATCTTAAGAGTcacatgagaagtcacactggagagaaaccgttCGCGTGCGATCAGTGTAAAAAACGGTTCACGCGTAAAGGAAGCCTCAGTAAGCACGCCAGGATTCATTTAAGAGAGAGCCGTTTCGTGTGTCATCTGTGTGCAGTGGGTTTCGAAGACATGAAACGACTTAAAAGGCACCTGGTAACTCACATCGGACGGAAGCCTTTTCTGTGTCACCGGTGCGGAAAGGCCTTCACGCACGAAGGAAACCTTAAGAGTCACGTAagaattcacaccggagagaagcctttcagCTGCCCACAGTGCGGAGTCGGTTTCACTGAAAAAAGAAGCCTCACGGACCACGTGagaatccacaccggagagaaacctttcACCTGCCAAgagtgcggaaagagtttcactCGGAAAGGAAGCCTCAAGGTCCACATGAGAATCCACAACAGCGAGAAACCTTTCTCCTGCTCGCTGTGCGAGAAGAGGTTCAGACATAAAAGAACGCTTAACATCCACGCCAGAGTCCACACCGGAGAAAGACCTTTCCCGTGTCTCCAGTGCGAAAAGAGATACGCGAAACGCGTCGATCTGAAAAGGCACGCGCGGTCTCATTCTGACAAGAAGCTGGCCGGATGCGCAGAGTGCGGGAAGACGTTTAAAAAAAGAGGCAGCTTCGAGAAGCACGTGTGCCTTCACTCTGGAGAGGTTAGGGTACCTTTGGGTCCTTGAACCACGTAAACAGCGGAGTCTACGAAGAAAAAAGTGTTAGTTCgttcaaatatgaaaattagcCTGCTTTACTCGACTCTAAAGCAGATTCCGTTATTCCGTATCCTAAAACTGTGGTTTGTATAGTCTCTAAATTCACTGAAATATAATGTCCTCCTATGAGGACACGGGGTCTTGGGAGGTTAAGAGCAAGTCAGTTCGGATGTCATATTCAAGAACGTTTATTTGTTGGATGTTTATGACGTGATATAGATTTCTgtacatgtaatcagttactagCCAGCGCTGCTCATAGTCTTCTCCTGAAACAAGGTTCTTCAGAAACGCAGAAGACTTTCTGCACAATGTGAAGTTTGAGGTAATGAGAGAAAACACCTGAACAAGAAGCTGCTCCTAAGGTGACTAAAGGAAGAGGAACAATCAAGGTgtcatgaaacatgaaaaaagtaATGACCACTGACAAAAGCACACttgtttactgaaaaaaaaaaaacataatgctgttattttcagccattatttttgcacttagtgtaaatagcatgtAATTAGAAAAGAAAGGATTAGCAGACTTGCTGATTGCTGGACATTCAGTCAGTAACCTTAGGTTGATGTCCATTCTTAAATATAGATCATTTATTCTATTGCCGGCTATCTAATGGCCACTTGTATAGACTCATTCACACAATATAGCCAATTATCGGATATTTTCACTGCAGGAACAGGTGTACATGAAGAATTTGCAATACGTTGCAAAAACTGCTCAGAAACATGACATGGAAAAAGATCAAGAAAACCAATGTCCCGCTTAAAACAGCAGCGCTCTTTAATTTTTCCCCTTCCTGCTACTGTTTAATGGATTAAAGTTTGTTTTCTGTCTTATTGCAGAAACTTGCTCTTCAAAGAGTGTACTTTTTCAGTGCAAGAGTCTGATTCTCCCATTACTCTCCCTCTGTCTTCAgtgctttttttgaaaaatgtatttaaaatgtatatttttgttcagcACCAAAATAAGATTCAACAGTGGCCGTAACATACTCTTGCAGCATAAATCAGGGGTGTCTGCTCAATCCTGCTCCTGGTTTCCCGATAATGTACTGAAGAGTTTAACTACAACCTGCTCCAACACACATGCTGGAGGTTTGTGGTGATCCAGATCTCTCTAATTAGCTGGCTTAATTGGGGttaaagctaaactctgcaggattgGGCACCCTAAGAGCAGAATTGGGCACCCCTGCCCAAAAgtgttactccaccccaaaaagTTCAATTATGTCATTAACTTACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252472 False 274 lncRNA 0.37 2 1704650 1705385
XM_043229225.1 False 2512 mRNA 0.44 3 1704578 1708360
XM_043229226.1 True 2513 mRNA 0.44 3 1704667 1708360

Neighbor

gene id symbol gene type direction distance location
LOC122331716 LOC107662536,LOC107722314,LOC107563124 coding upstream 51996 1647600 ~ 1652582 (+)
LOC122331714 LOC107570577,LOC107749336 coding upstream 59223 1633708 ~ 1645355 (+)
LOC122331726 NA coding upstream 132513 1569927 ~ 1572065 (+)
LOC122331723 NA coding upstream 172905 1529034 ~ 1531673 (+)
LOC122331467 NA coding upstream 215178 1485664 ~ 1489400 (+)
LOC122331724 LOC107571194 coding downstream 2562 1710922 ~ 1713379 (+)
LOC122331711 NA coding downstream 386735 2095095 ~ 2104299 (+)
LOC122331712 NA coding downstream 397493 2105853 ~ 2107989 (+)
LOC122331483 LOC107690531 coding downstream 465133 2173493 ~ 2178281 (+)
LOC122331539 NA coding downstream 552965 2261325 ~ 2271136 (+)
LOC122331742 NA non-coding upstream 83621 1613706 ~ 1620957 (+)
LOC122331737 NA non-coding upstream 353205 1347132 ~ 1351373 (+)
LOC122331736 NA non-coding upstream 377672 1325054 ~ 1326906 (+)
G170422 NA non-coding upstream 473523 1230846 ~ 1231055 (+)
G170418 NA non-coding upstream 484218 1214429 ~ 1220360 (+)
G170504 NA non-coding downstream 244350 1952710 ~ 1953073 (+)
G170508 NA non-coding downstream 321866 2030226 ~ 2084111 (+)
G170639 NA non-coding downstream 475043 2183403 ~ 2183627 (+)
G170657 NA non-coding downstream 512111 2220471 ~ 2220761 (+)
G170662 NA non-coding downstream 523787 2232147 ~ 2232355 (+)
G170438 NA other upstream 194521 1464065 ~ 1510057 (+)
LOC122331738 NA other upstream 219193 1463637 ~ 1485385 (+)
G170431 NA other upstream 351936 1351676 ~ 1352642 (+)
G170357 NA other upstream 598687 1105077 ~ 1105891 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other upstream 645528 1049092 ~ 1059050 (+)
LOC122331469 NA other downstream 315150 2023510 ~ 2029164 (+)
LOC122331715 LOC107553789,LOC101886404,LOC107574780 other downstream 369375 2077735 ~ 2087176 (+)
LOC122331475 LOC107558504,LOC107575635,LOC107711457 other downstream 433920 2142280 ~ 2145046 (+)
LOC122331512 NA other downstream 716781 2425141 ~ 3015269 (+)
G170683 NA other downstream 923017 2631377 ~ 2813039 (+)

Expression


Co-expression Network