LOC122331736


Basic Information

Item Value
gene id LOC122331736
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 1325054 ~ 1326906 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006248274.1
ATGTGTGAAGGACACCTAACAGCTTCTCTAGTATTACTACTTAAAATAATCGGCTAAGTTACAGGTTTTACaatcaaactttatttttgccTGTAGTGCTTTGTATtgtaaccaaaaaaataagagtttattaaaagtaaactCTCACGAGAGCCAATTGTAACTAAAAACTGAGCTTCAAACAAGGGAGTCTTCTACATCATTCCTGAAGAACTTCAACCTGCGGGCAACATACAACTGATGCTCAATAAACACAACTCACTACAGCTTCTCCAGTCTTGCTCCTTACAAGACAATCAACAGCAGTTGGAGTGTGTTTTTATGAGTTGATGGCTGTAGAAAAACATGACGCTGAAAGCTTTCCTTTGACTGATGAAACATGATGAAACATAAACCCACTGGACAGGTTCTAACATAATTTGCTTTCTCAGGAACTTCTGAAACGATGGCTCAACTTAACATCAGCATCAATGACTCGGCTGCATCCGATGATGATTTACTCTTTAGGAATTTAATGGAACTCCAAAGTACTCATTTTATGGAAGGTTATCCAGAACTTGTATATATCCGTGTCCTTTCAGTCATTGAGATCCTAGTCATGATCTTAACTCTGATCGCCTTGTGTTTCATCATCAAATCCAGGCCTGCTGCTGCAGTTTTTGTTAGTAATTTAATACTTTCAGATCTCGTACAGGTCATTAGTATATTAATAGCAGCAACAATCTCATGGCATGAGAGACTGGTTCCGGCATATAACTATTCTTTGATGGTGGGTCTGTATTTTATGGCATGTGTTGCTTTTGAACGATATCTTCTGATTTGTCATCCTATCTGGTACAAATCTCACCAATCACTCAAactctcttgttttatttctgtgatcatcTGGTTTGTGCCTCTAAC

Function

GO:

id name namespace
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006248274.1 True 903 lncRNA 0.38 4 1325054 1326906

Neighbor

gene id symbol gene type direction distance location
LOC122331732 LOC107728143 coding upstream 82920 1240549 ~ 1242134 (+)
LOC122331697 NA coding upstream 180537 1139797 ~ 1144517 (+)
LOC122331492 LOC107747346,LOC107729629,LOC107559521 coding upstream 220930 1098821 ~ 1104124 (+)
LOC122331707 LOC107747346,LOC107729629,LOC107559521 coding upstream 232671 1084988 ~ 1092383 (+)
LOC122331500 LOC107559517,LOC107717910 coding upstream 311146 1012310 ~ 1013908 (+)
LOC122331720 LOC107558504,LOC107575635,LOC107711457 coding downstream 117320 1444226 ~ 1448004 (+)
LOC122331733 LOC107676291 coding downstream 121365 1448271 ~ 1452263 (+)
LOC122331725 NA coding downstream 127988 1454894 ~ 1457370 (+)
LOC122331467 NA coding downstream 158758 1485664 ~ 1489400 (+)
LOC122331723 NA coding downstream 202128 1529034 ~ 1531673 (+)
G170422 NA non-coding upstream 93999 1230846 ~ 1231055 (+)
G170418 NA non-coding upstream 104694 1214429 ~ 1220360 (+)
G170417 NA non-coding upstream 112141 1212681 ~ 1212913 (+)
G170415 NA non-coding upstream 150036 1174748 ~ 1175018 (+)
G170410 NA non-coding upstream 176849 1147859 ~ 1148205 (+)
LOC122331737 NA non-coding downstream 20226 1347132 ~ 1351373 (+)
LOC122331742 NA non-coding downstream 286800 1613706 ~ 1620957 (+)
G170504 NA non-coding downstream 625804 1952710 ~ 1953073 (+)
G170508 NA non-coding downstream 703320 2030226 ~ 2084111 (+)
G170639 NA non-coding downstream 856497 2183403 ~ 2183627 (+)
G170357 NA other upstream 219163 1105077 ~ 1105891 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other upstream 266004 1049092 ~ 1059050 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other upstream 525783 792637 ~ 799271 (+)
LOC122331683 NA other upstream 1247917 75300 ~ 77137 (+)
LOC122331690 LOC107575684,LOC107720835 other upstream 1263378 41422 ~ 61676 (+)
G170431 NA other downstream 24770 1351676 ~ 1352642 (+)
LOC122331738 NA other downstream 136731 1463637 ~ 1485385 (+)
G170438 NA other downstream 137159 1464065 ~ 1510057 (+)
LOC122331718 NA other downstream 377672 1704578 ~ 1708360 (+)
LOC122331469 NA other downstream 696604 2023510 ~ 2029164 (+)

Expression


Co-expression Network