LOC122331720 (LOC107558504,LOC107575635,LOC107711457)


Basic Information

Item Value
gene id LOC122331720
gene name LOC107558504,LOC107575635,LOC107711457
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 1444226 ~ 1448004 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229229.1
TGTAAGACAGACATCTCTCAGGCTTTACAGAAGAAGAGCTTCTCTCAGACTTAGCACCGCAGTCTACAGTTCAGTCCAAGTAAGTTCAGGCACGATGCAAAGCATTATTCCCAAGAGCAAAACCAAAGGTACTGACTTCTGTGGAGTGGACCATTGCTATTATATAATCCGCTCTGATCTCGGCTTCTATATGCAGTCAAGTAATTTCAATAAAGGGTCAGACCTCAACATTTTCAGTCTGCACCCTGCATGCCAAAATGGAGACCATTACCTTGGTCATCAGGATGGCTACTTCTACATCATCAAGGGCAATTCTTACCGCAGAGTCACCGATCTGTCGACAGACAGTAGTGCTGTAGTTTACAGTCTTCATCCCAACTGCCAAGGTGGAGACCACTACCTCTCGGCTTTTGGCAATTTTTACATCATCTTCCAAGGAAAGGGCACTTACCGAAGAACAACTAACATGAATCATGACTGGGATGCTGTAGAATAcaagctgcatcccaactgcaGAGACGGTCTGTATTACTGGGGCTTGCGATTCCACTACTACTTCCTCAAGCCGAGTTCAAAGTGGGGAGTTGAATACTACAAAGGTACCAACTTCAACAAAGACGAGTGCGTCAATGTCTACTCTGTTCATCCTGATGTTCTTAACTTCCTGCCTGGTGGGCTGTCAATTACTAAAGGCCCAGCATTTGGGAGGTGGGagaatattaaaactataaataatgacagcaaCACGCCAGTGAAgtggcaaaataaaattaataaaaaggttGGATACAATAAAGAGAAGATGTCCCAGATCACTCACAACTGGAAGATAGCCACGTCAGTCTCGACTGAATCTGGAACCCTTGAAGGGTTAATTGCGAAGTGGCAGTTCTCGTTCTCTGCAGAATATGGAGGTTCACGTGTCAGCACTGAAAAGGAAACCTGGACCGAACTCACTGAAGTGGAAGAACAACTCTCACTCGAGCTGCAGCCAAATCAGAGTTTTTATCTGTGGCAATACAAAATGGGTTTTGGGCAAGAACCTGTGTTGTTCTGTCGTGATTTGAAGATTGACGATGTGCCTAACCCTCCAACTGAAGTCCCTCTGCCACCTGCATAATCATAAGAAATATCAGCCCGGGTTTACTCCGAGGATAACCAAGTGCTTCAGTTAAATACCTGTAGTAGCTTAGATGTGTTAAAGCATTGCTTAAAATGTAGCAGAGATTAGGGTgaataaagtgaataaatatcTATACGTTAATTTTTAATggttaatacaattaaataatacaacaaaaaaaataatttctttagttGAAGGTTGATTAACAAGTCAGTAAGCacagcattttatattaatttgcacATTCTGTACATGTGTGAACATgtagaaaattacatttcatctAATTTGCATTATGCTTTCAATATATTAAAGCTGCCATAAAGTCTGAGGCTTCATTGAGTCTTTCCCTTTACCAAAGTGTTGTGTATGTCTGACGAATCCACACTTTCACATACCACACAGACTTGTCtatgaaatgtgatttttttttttttgtttaagaaatATGCAGAAAACAAAGAATTAATAGAACCTAGAGGTTTGcaactgaaatatgcatttttatgatccATTACAGACTCCAACCATTCAAATAAACCAGGTTTGAGagagtttgtttattaagctaCATTAGCGATTATCGATCAGCAGGATAAGTGCATATTATAACAATGTAGTAATTGGGAGAAATTATTTGTAGATAATAGGGAAATTTTAACTTTGATATCGAtatcatatatacacaaaatattcatatccaattaatccattttttttctctctaaggGTTTTTATATCTAAATGTGTGTTATGGTGTGGTGTGGAAAGGAGCACATGAAGATGTcagataaaaattaataaatccaCAGTAGGGCAGTTCTAGACTGAGGGGTAACAGCCACACAAGTACATCGATGAGGCTGGACAAATGAGtagttttcaacattttatgctCTGCAAAAAGAAACCCACTTTGAATTGCTAATTTCTTATTTCTATttgtaaagttatttaaatgatatataagtTCAGTTAATTTTAGGTACCATTAAATTGGTTTGGCTTTTAGCAGGGTTCATCGCCATAGTAACTTACGCTCCACAGCTAGCCTCCGGGGCAGGTTATGTTCTGATATTGTATTACAAGATGGCGGCGCATGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107558504

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229229.1 True 2229 mRNA 0.39 2 1444226 1448004

Neighbor

gene id symbol gene type direction distance location
LOC122331732 LOC107728143 coding upstream 202092 1240549 ~ 1242134 (+)
LOC122331697 NA coding upstream 299709 1139797 ~ 1144517 (+)
LOC122331492 LOC107747346,LOC107729629,LOC107559521 coding upstream 340102 1098821 ~ 1104124 (+)
LOC122331707 LOC107747346,LOC107729629,LOC107559521 coding upstream 351843 1084988 ~ 1092383 (+)
LOC122331500 LOC107559517,LOC107717910 coding upstream 430318 1012310 ~ 1013908 (+)
LOC122331733 LOC107676291 coding downstream 267 1448271 ~ 1452263 (+)
LOC122331725 NA coding downstream 6890 1454894 ~ 1457370 (+)
LOC122331467 NA coding downstream 37660 1485664 ~ 1489400 (+)
LOC122331723 NA coding downstream 81030 1529034 ~ 1531673 (+)
LOC122331726 NA coding downstream 121923 1569927 ~ 1572065 (+)
LOC122331737 NA non-coding upstream 92853 1347132 ~ 1351373 (+)
LOC122331736 NA non-coding upstream 117320 1325054 ~ 1326906 (+)
G170422 NA non-coding upstream 213171 1230846 ~ 1231055 (+)
G170418 NA non-coding upstream 223866 1214429 ~ 1220360 (+)
G170417 NA non-coding upstream 231313 1212681 ~ 1212913 (+)
LOC122331742 NA non-coding downstream 165702 1613706 ~ 1620957 (+)
G170504 NA non-coding downstream 504706 1952710 ~ 1953073 (+)
G170508 NA non-coding downstream 582222 2030226 ~ 2084111 (+)
G170639 NA non-coding downstream 735399 2183403 ~ 2183627 (+)
G170657 NA non-coding downstream 772467 2220471 ~ 2220761 (+)
G170431 NA other upstream 91584 1351676 ~ 1352642 (+)
G170357 NA other upstream 338335 1105077 ~ 1105891 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other upstream 385176 1049092 ~ 1059050 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other upstream 644955 792637 ~ 799271 (+)
LOC122331683 NA other upstream 1367089 75300 ~ 77137 (+)
LOC122331738 NA other downstream 15633 1463637 ~ 1485385 (+)
G170438 NA other downstream 16061 1464065 ~ 1510057 (+)
LOC122331718 NA other downstream 256574 1704578 ~ 1708360 (+)
LOC122331469 NA other downstream 575506 2023510 ~ 2029164 (+)
LOC122331715 LOC107553789,LOC101886404,LOC107574780 other downstream 629731 2077735 ~ 2087176 (+)

Expression


Co-expression Network