LOC122331467


Basic Information

Item Value
gene id LOC122331467
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 1485664 ~ 1489400 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228916.1
AGCTGCAGTCCAAGATACATACGGCTGCATTAATTGGGAAGTTAGATTTATGCCCCTCAGTGAAACTGCTGAGAGTCAGCtgttgaaaaagagaaaatgaggaGTCTGTCACAAACAACTGACTGTAATGAAGAGGAAGTGAAGGTTCTCATGAAGTCTACTACTACAGTCAACGAAAAGATATCAACAATGGAACAGACATGAAAACTCTCACTGAGGAGTGGCCATTTTTGTTTCAGGAAAGTGGAATGGAAGTGCACTTTAAAGACCTCACAGGGATACCACTTAAAGAGACCTTCCTGAACAGCattgacagaaaaggaaacaGGCTGTTGAACTTTATGAGGAATGTTTGTGCAACCAGGAACAAGCGTGTCTTACAGGCTGTCACAAAACTTGAAGTTTTGAGAGGACAGACGAATGGTTGCTCAGAGGATGTGAAAGACATGATTCTTCTACTTCTCTCCTATTTTGATGAGAAAGAAGAGCTCCTTCTTCATTATGTAGAAGAGACAAGCCTTGCAAAGGATGTAGAGTTGGACAACCTGCCTCCGACGCCTTGCATTATTGTGTGTGGACCCTCCTGCTATGCTGCTGTTCGATTTATGCTCAGTGTGGACCGCAAGATTGTGAATGATGACATCACTACATTCATCGCTGCCGTTTGCCTAATGTTCGGCAGTTATTACTGTTTCAATATACACTACCCTACTGAACTGGCATCAGTGCTTGAATTTTTGCAAAGgtgcTTCTTCATCATCAATCCTGAAAAGGGCACAAAGGTTGTggaaaagaacaacaaaaaacgaCTCCCAGTGAACCCAAGAGTCTTCACCTTAATCTCTGACCTTTCTGATCACGAGTGGCGAGAGAGACCTCAGTCTTCTGGCGGAAAATCTAGCGTGACCAAACAGAGCGCACGAGTGGTGGCCAATTATGACGTCACGGCCTTCCTGCGCAACCTATGA

Function

GO:

id name namespace
GO:1990138 neuron projection extension biological_process
GO:0048588 developmental cell growth biological_process
GO:0048675 axon extension biological_process

KEGG:

id description
ko04666 Fc gamma R-mediated phagocytosis
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228916.1 True 968 mRNA 0.44 4 1485664 1489400

Neighbor

gene id symbol gene type direction distance location
LOC122331725 NA coding upstream 28294 1454894 ~ 1457370 (+)
LOC122331733 LOC107676291 coding upstream 33401 1448271 ~ 1452263 (+)
LOC122331720 LOC107558504,LOC107575635,LOC107711457 coding upstream 37660 1444226 ~ 1448004 (+)
LOC122331732 LOC107728143 coding upstream 243530 1240549 ~ 1242134 (+)
LOC122331697 NA coding upstream 341147 1139797 ~ 1144517 (+)
LOC122331723 NA coding downstream 39634 1529034 ~ 1531673 (+)
LOC122331726 NA coding downstream 80527 1569927 ~ 1572065 (+)
LOC122331714 LOC107570577,LOC107749336 coding downstream 144308 1633708 ~ 1645355 (+)
LOC122331716 LOC107662536,LOC107722314,LOC107563124 coding downstream 158200 1647600 ~ 1652582 (+)
LOC122331724 LOC107571194 coding downstream 221522 1710922 ~ 1713379 (+)
LOC122331737 NA non-coding upstream 134291 1347132 ~ 1351373 (+)
LOC122331736 NA non-coding upstream 158758 1325054 ~ 1326906 (+)
G170422 NA non-coding upstream 254609 1230846 ~ 1231055 (+)
G170418 NA non-coding upstream 265304 1214429 ~ 1220360 (+)
G170417 NA non-coding upstream 272751 1212681 ~ 1212913 (+)
LOC122331742 NA non-coding downstream 124306 1613706 ~ 1620957 (+)
G170504 NA non-coding downstream 463310 1952710 ~ 1953073 (+)
G170508 NA non-coding downstream 540826 2030226 ~ 2084111 (+)
G170639 NA non-coding downstream 694003 2183403 ~ 2183627 (+)
G170657 NA non-coding downstream 731071 2220471 ~ 2220761 (+)
LOC122331738 NA other upstream 279 1463637 ~ 1485385 (+)
G170431 NA other upstream 133022 1351676 ~ 1352642 (+)
G170357 NA other upstream 379773 1105077 ~ 1105891 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other upstream 426614 1049092 ~ 1059050 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other upstream 686393 792637 ~ 799271 (+)
LOC122331718 NA other downstream 215178 1704578 ~ 1708360 (+)
LOC122331469 NA other downstream 534110 2023510 ~ 2029164 (+)
LOC122331715 LOC107553789,LOC101886404,LOC107574780 other downstream 588335 2077735 ~ 2087176 (+)
LOC122331475 LOC107558504,LOC107575635,LOC107711457 other downstream 652880 2142280 ~ 2145046 (+)
LOC122331512 NA other downstream 935741 2425141 ~ 3015269 (+)

Expression


Co-expression Network