CI01000003_00011191_00013812


Basic Information

Item Value
gene id CI01000003_00011191_00013812
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 11191 ~ 13898 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00011191_00013812.mRNA
ATGATCCATCTGCTGAATACACTTCTGATGCATCAGGTTCACCTGGTCCTGGATGCTCCACTTCATCATCAAGCACTTCAACTGGAAGATGTGAGTAAAAATATGATCTTAAACATTAAACTAAGGGGATGGTTGCGCATTGTTCACAGTGACCGCAAAGCCACAGTGCAACAAATCATCAGCAATTACAAAAGTGGTGACCTGGGCAATGTGTCACAGCACACAGTTCATTGCAGCCCCCTATCATGGGGATGCAGCTTAGTAGTTGGCTACACAGGCACAAGCGCAGAAGGCTGCGATAATCTCTGTGCTTTGACACATTGCTCTGGTGACACTAGCACTAAAACTTTGGTTCCTGACAATGACTGGCAGTATGATTTTGTTGTTCCGTGGGAAAAAATGCCAGCAAGTTTTATGAAGAAGACTAAAAGTGGGGAAAGGCTGAGTTGCTCTGAGAGAAGACAGTTGGTTCGCACTGTTGCTTCTGAAATCCTAGAATGCAAAGAGAGAGCAAGCAGAGCAGGGAGAATCCTCACCAAGATTCGAACTGGAGGGGATCATGTTTGTGGGGCAGTGATGTTCCTGTTTGCCCATTTCAAAAATGACCAAGACCAGTTTCTTGTGATGGTAGAAGACACTTGTGTTCCAAATGATATATGCCCAGAGCAGCTTCCACCTACTCCATGTATAGTGTGTGGAGAGAACCCACTGACAGCCAGTTTATACATGGTAGCAGTAGACCAGATGATTGTGAATGACCATCTTTTCAGATTTACTGAGGCCCTGTGTCTGATGTTTTCCCTCTACTACATATTGAACATCAGTTACCCTGTAGAACTGGAGGCCACACTAGAATTCTTGCAAAGGTGCATCTTCAGGATAAATCCTCATAAAGGTACCAAGGTGGAAAAGAGAGAGAAAAAGCGAGTGTACTCTGTCAACCCAAAAGTATTGAGTCTCACATCAAAAATTGCTGCATTTGACTGGGGAGACTAACAGGTATAGTATTTTGAGCAGGGATCTCTGTGCCATCTTGTATACATAGCAGTGGCTTTATTGTCTGTGTTTATCATTCATCACTG
>TU25178
ATCATGGGGATGCAGCTTAGTAGTTGGCTACACAGGCACAAGCGCAGAAGGCTGCGATAATCTCTGTGCTTTGACACATTGCTCTGGTCACCACTGTATTGCTGCTGGTGTTTTGTCACACGGTGGCCCTGCAGCTCCCCTCTGGCATCACTGAGTTGTGGACATCACATGGCTGGATGATGGTTCGTTGTTTCTGAAACATACTCACTACAGCGACAGTTGAACAACCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00011191_00013812.mRNA False 1082 mRNA 0.44 6 11191 13898
TU25178 True 230 lncRNA 0.51 1 11737 11966

Neighbor

gene id symbol gene type direction distance location
CI01000003_00007611_00010967 NA coding upstream 224 7611 ~ 10967 (+)
CI01000003_00157111_00159800 NA coding downstream 142965 156863 ~ 160244 (+)
CI01000003_00266342_00275005 NA coding downstream 252444 266342 ~ 275312 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 308969 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 341346 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 366596 380494 ~ 386091 (+)
G22337 NA non-coding downstream 13365 27263 ~ 27570 (+)
G22339 NA non-coding downstream 19256 33154 ~ 36618 (+)
G22394 NA non-coding downstream 123995 137893 ~ 160460 (+)
G22396 NA non-coding downstream 131960 145858 ~ 146705 (+)
G22432 NA non-coding downstream 192471 206369 ~ 206686 (+)
G22420 NA other downstream 165633 179531 ~ 189439 (+)
CI01000003_00390997_00406970 WDR33 other downstream 377115 390622 ~ 408312 (+)
G22578 NA other downstream 910905 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1849370 1862854 ~ 1868137 (+)
G23870 NA other downstream 2266762 2280660 ~ 2285641 (+)

Expression


Co-expression Network