tmem167a (tmem167a,LOC107658615,LOC107588977,LOC103397084)


Basic Information

Item Value
gene id tmem167a
gene name tmem167a,LOC107658615,LOC107588977,LOC103397084
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048028.1
NCBI id JAEQBD010000373.1
chromosome length 1110666
location 133827 ~ 182008 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU268994
TCATTTCCATCCTACACCGGAAGTGTGAGTTGGCTGGCCGGGGATCTCAAGATGTCTGCCATATTTAATTTCCAGAGTCTGTTGACGGTTATTTTACTTCTCATCTGCACCTGTGCGTATATACGAGCCCTTGCTCCCAGCCTGctggataaaaacaaaacaggATTCCTTGGAATATTCTGGAAATGTGCAAGAATAGGTGAGCGCAAAAGCCCTTACGTGGCGTGTTGCTGTATCATCATGGCCTTCACCATTTTATTTTCGGAGTAGCGTCGGAAGCGTGTCAAGATTTGGAGCAGGCAGAGAGGATTTCCAAGAACAGCTACAAGATTTTACAGCAGGGAACAAGATGTGTAATTGGGCGACATTCAGAGTCTCTCGGGCAGAACTGGCTCCTGGTAATGCATGTGGAGTGCTCTCCAAATACAGCTTGAGCGTGTCTCTCAGCCTCCCGGAcctatttttgtaaatacaaataattgttGGTATCCTTGGTAATGCTCCGGTTGTCACCGACTCGTGCGCTCAAAGCTGATCAGATGTTACGTGTTTGTTGTCGGAGCCAAAATGCTTGTCAAtgacagttattttaatatggGACATTGAGGATAAATTTGACGCACGCGGATGTGCTTGATATCATGCTTGTTAAATTCTTTGAATCTGTTGACTTTACATGGACAAGTTTgcattaaaagatgaatttatTACGGATATCTTCATTTataagtttatttttgtgtctgTAAAGCAGAAAAACATTAGCTATTCACAATACAGAAATTTTGTACATTGTTGATGGCTGATATGATG
>TU268995
TCATTTCCATCCTACACCGGAAGTGTGAGTTGGCTGGCCGGGGATCTCAAGATGTCTGCCATATTTAATTTCCAGAGTCTGTTGACGGTTATTTTACTTCTCATCTGCACCTGTGCGTATATACGAGCCCTTGCTCCCAGCCTGctggataaaaacaaaacaggATTCCTTGGAATATTCTGGAAATGTGCAAGAATAGGTGAGCGCAAAAGCCCTTACGTGGCGTGTTGCTGTATCATCATGGCCTTCACCATTTTATTTTCGGAGTAGCGTCGGAAGCGTGTCAAGATTTGGAGCAGGCAGAGAGGATTTCCAAGAACAGCTACAAGATTTTACAGCAGGGAACAAGATGTGTAATTGGGCGACATTCAGAGTCTCTCGGGCAGAACTGGCTCCTGGTAATGCATGTGGAGTGCTCTCCAAATACAGCTTGAGCGTGTCTCTCAGCCTCCCGGAcctatttttgtaaatacaaataattgttGGTATCCTTGGTAATGCTCCGGTTGTCACCGACTCGTGCGCTCAAAGCTGATCAGATGTTACGTGTTTGTTGTCGGAGCCAAAATGCTTGTCAAtgacagttattttaatatggGACATTGAGGATAAATTTGACGCACGCGGATGTGCTTGATATCATGCTTGTTAAATTCTTTGAATCTGTTGACTTTACATGGACAAGTTTgcattaaaagatgaatttatTACGGATAaaaaaaaaaaaaaaaaaa
>XM_043231417.1
caAACTAACACACTGAAGAACTCATTTCCGTCTCTCATCCGGCTTTTCGACGCTTCGCGCTTCCAGGCTGCCGTAGCGGTGACGTCATTTCCATCCTACACCGGAAGTGTGAGTTGGCTGGCCGGGGATCTCAAGATGTCTGCCATATTTAATTTCCAGAGTCTGTTGACGGTTATTTTACTTCTCATCTGCACCTGTGCGTATATACGAGCCCTTGCTCCCAGCCTGctggataaaaacaaaacaggATTCCTTGGAATATTCTGGAAATGTGCAAGAATAGGTGAGCGCAAAAGCCCTTACGTGGCGTGTTGCTGTATCATCATGGCCTTCACCATTTTATTTTCGGAGTAGCGTCGGAAGCGTGTCAAGATTTGGAGCAGGCAGAGAGGATTTCCAAGAACAGCTACAAGATTTTACAGCAGGGAACAAGATGTGTAATTGGGCGACATTCAGAGTCTCTCGGGCAGAACTGGCTCCTGGTAATGCATGTGGAGTGCTCTCCAAATACAGCTTGAGCGTGTCTCTCAGCCTCCCGGAcctatttttgtaaatacaaataattgttGGTATCCTTGGTAATGCTCCGGTTGTCACCGACTCGTGCGCTCAAAGCTGATCAGATGTTACGTGTTTGTTGTCGGAGCCAAAATGCTTGTCAAtgacagttattttaatatggGACATTGAGGATAAATTTGACGCACGCGGATGTGCTTGATATCATGCTTGTTAAATTCTTTGAATCTGTTGACTTTACATGGACAAGTTTgcattaaaagatgaatttatTACGGA

Function

symbol description
tmem167a Predicted to be involved in intracellular transport and protein secretion. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Orthologous to human TMEM167A (transmembrane protein 167A).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268994 True 813 lncRNA 0.42 4 176738 181924
TU268995 False 734 lncRNA 0.43 5 133827 181924
XM_043231417.1 False 798 mRNA 0.45 4 176837 182008

Neighbor

gene id symbol gene type direction distance location
LOC122333719 acot12,LOC107588978,LOC107689813 coding downstream 48775 77096 ~ 85052 (-)
LOC122333708 NA coding downstream 68893 62096 ~ 64934 (-)
LOC122333717 LOC107602038,LOC107741683,LOC107689798,LOC107689805,LOC107741691,LOC107658537 coding downstream 73074 57672 ~ 60753 (-)
hapln1b hapln1b,LOC107741669,LOC107602078,LOC107689433,LOC107758638,LOC107658619,LOC107588973 coding upstream 56094 238102 ~ 244152 (-)
edil3b edil3b,LOC107602080,LOC107741668,LOC107758635,LOC107658618,LOC107689461,LOC107588972 coding upstream 79171 261179 ~ 283237 (-)
mef2ca mef2ca,LOC107758633,LOC107689483,LOC107741665,LOC107658621,LOC107588969 coding upstream 147735 329743 ~ 368431 (-)
arrdc3b LOC107658622,LOC107741663,LOC107689502,LOC107588967,LOC107758632,LOC107602085 coding upstream 224229 406237 ~ 411767 (-)
tlr8b LOC107589031,LOC107758595,LOC107658565 coding upstream 257362 439370 ~ 443670 (-)
G181297 NA non-coding upstream 31577 213585 ~ 214697 (-)
G181309 NA non-coding upstream 120065 302073 ~ 305762 (-)
G181325 NA non-coding upstream 144804 326812 ~ 328227 (-)
LOC122333706 NA non-coding upstream 254040 436048 ~ 438104 (-)
G181353 NA non-coding upstream 326161 508169 ~ 510043 (-)
LOC122333698 NA other upstream 75622 257630 ~ 326730 (-)
cetn3 cetn3,LOC107758597,LOC107689496,LOC107658563,LOC107589032,LOC107602084,LOC107741664 other upstream 206936 388944 ~ 391935 (-)
G181349 myo18b,LOC107758573,LOC107658543,LOC107589013,LOC107567742 other upstream 414884 596892 ~ 598645 (-)
tacr1b tacr1b,LOC107741654,LOC107706809,LOC107658568,LOC108425229,LOC107689601,LOC107577657 other upstream 492127 674135 ~ 682898 (-)
tuba7l tuba7l,LOC107658546,LOC105015227,LOC100136736,LOC108255233,LOC107706804,LOC105889199 other upstream 541146 723154 ~ 726562 (-)

Expression


Co-expression Network