CI01000004_01230991_01235864


Basic Information

Item Value
gene id CI01000004_01230991_01235864
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1230896 ~ 1235864 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01230991_01235864.mRNA
GTTTCTCAGGCGGCTGCAGAGCTTCAGCAGTTCTGCATTCAAAACGCCCTACAAGATCCCCTGCTGACCGGAGTGTCTTCAAGCACCAACCCCTTCAGGACGCAGAAGGTTTGCTCCTTCTTGTGAGGGTCCATGATGGCCACCTGCTATTGGCTTTTTCCGATTCCTGTGACATTTCTGCTGGGGGGAAAATAAGAACCACTGCCATGATGTATAATCGAAAACGCAACAGCACAAAGCTGTCCACTTGCCAGTTAATACCTCATGCCATAAACACAGAAATAAGAACTGAAAGGATTTACCGCTTTGTCTGTTATGAGGAGCTGCGGCTGGGTCCCGAATCATTGCTCAACAAAGCGTCTGCAGCATCATGTGGAGCTGTGCAAACTGGACAATCAGACTTCACCATATTTGCTTATTTCAAAGACTGTGGAACCAAACTATATGTAACCGGGGACTCTCTGGTATATTCAAATGTCCTTGTTTATTCTCCTCTACCATCTCCTGATGGTGTGCTTCACCAGGATGGTACAGCCATACCTGTTCAGTGCCAATTCCGGAGGTGGTATAATGTTGACAGTGCAGTAGTGGCACCCACTTGGATTCCATTTGATTCCACTGTTTCGGTCTTCGATTATCTGGACTTTAGTCTCCGACTGATGAGTGATGACTGGCAGTATGAGAGGGGCTCAAACGTCTATTTTCTGGGGGATGTGATACACCTTCAAGCATCAGTTACCTTGGCCAATCATTTGCCCCTACTTCTATTTATTGACTGGTGTGTGGCTACACCAACTTTTAACATGGAGACTAGTGATGTCAAATATTCCTTTATAGATTATCGTGGATGTCTTGCAGATAGTAGGGGTTTGTACTCTCACTCCAAGTTCTTGCAGAGGAGCCAAGGCAACAAATTAAACCTACTATTGGATGCCTTCAGGTTCCACAAGTTGACAAGCAACTTGGTGTACATCACGTGTTACCTAAAGGCCATCCCTGCTGCGTATTCTGTGAGCGCTCAGAATCGAGCATGTTCCTTTACTGATGGAAGGTGGCAGTCTGTCGATGGAAATGATGAGGTTTGTAACAGCTGTGAGCCATCCAAACAAGGTGCGGCTGAGCCTGAACCAATCAAGCCTTTCCGCATCACACTAGCCCCTCCTGTCAAGCAGTCATATTTGGCCCCAAGGTCTGGGTCTGCTGATTTCTTTCATGTAAGACCCGGTCAATCATTAGACCCCTTTAGAGCTCTCATACAGGCAAGGCAATATGCCTATGGCAGTCTGTCAAAGAGAGGAACCGACTCGAACAAAGGTTTGCATAATTTTAATGTTTCATTCTTCATATTTATCAATTCAAGTTATGTGGCACTCAAACACCCCTCACCCTTTATAACAGACTGGAAGATTGCTACCTTGGGTCCTCTGTTTCTGATTCCAAGACAAGGAAATGCCACCCAGTCAGCTGGATCTCTGCTGGGCCAAACTGCTGGTGTTTTCTCCGCATCTGTTACTGAGGAGCCGGAGTTCTTATTCAACTCAACTGAAAAGAGTCCTATGACGGATGAGCTGGAGTTTAAAACCACTCCAGAGACTGGAAGCTTCAGTCCATTAGAGAACAGCCTGTTCTTTAAAGCTTCTGATCTTTTTGGTTCAGAAGAGGGAAGCGGGTTTGAATAATGACCCCCCACCACCCACTTAAAAATGAGTGTGAGGGGGAAAAATGGAAACTAACAATGTGACCTTTTCTAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01230991_01235864.mRNA False 1758 mRNA 0.46 9 1230912 1235864

Neighbor

gene id symbol gene type direction distance location
CI01000004_01199771_01204393 OTOL1A coding downstream 24663 1199491 ~ 1206249 (-)
CI01000004_01163187_01164466 NA coding downstream 66446 1162943 ~ 1164466 (-)
CI01000004_01151429_01155980 NA coding downstream 74872 1150909 ~ 1156040 (-)
CI01000004_00976733_00985797 NA coding downstream 243518 976415 ~ 987394 (-)
CI01000004_00888465_00928759 BRINP3B coding downstream 301396 888273 ~ 929516 (-)
CI01000004_01252844_01260204 NA coding upstream 16788 1252652 ~ 1260354 (-)
CI01000004_01280983_01292761 FZR1B coding upstream 44721 1280585 ~ 1292761 (-)
CI01000004_01311508_01319203 ALDH9A1B, ALDH9A1 coding upstream 75191 1311055 ~ 1319203 (-)
CI01000004_01352499_01377500 SLC1A7A, SLC1A7 coding upstream 116209 1352073 ~ 1377515 (-)
CI01000004_01394018_01397517 TMEM125B coding upstream 158105 1393969 ~ 1397517 (-)
G25451 NA non-coding downstream 98335 1132270 ~ 1132577 (-)
G25439 NA non-coding downstream 109951 1120349 ~ 1120961 (-)
G25057 NA non-coding downstream 115420 1112772 ~ 1115492 (-)
G25055 NA non-coding downstream 123951 1106705 ~ 1106961 (-)
G25050 NA non-coding downstream 130679 1100034 ~ 1100233 (-)
G25525 NA non-coding upstream 85218 1321082 ~ 1324290 (-)
G25524 NA non-coding upstream 94507 1330371 ~ 1330753 (-)
G25527 NA non-coding upstream 96699 1332563 ~ 1333989 (-)
G25515 NA non-coding upstream 190828 1426692 ~ 1427877 (-)
G25511 NA non-coding upstream 195983 1431847 ~ 1435337 (-)
CI01000004_01773383_01774888 INSL5B other upstream 537176 1772928 ~ 1774942 (-)
G26788 NA other upstream 2038569 3267683 ~ 3275721 (-)
G27746 NA other upstream 3942363 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 4384519 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 5298963 6538904 ~ 6541252 (-)
CI01000004_00833574_00834659 NA coding downstream 301024 832330 ~ 835867 (-)
CI01000004_00812006_00813189 RGS5B coding downstream 323623 811577 ~ 813268 (-)
CI01000004_00794261_00800431 NA coding downstream 336457 794113 ~ 800434 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location