CI01000004_04467142_04474270


Basic Information

Item Value
gene id CI01000004_04467142_04474270
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4466766 ~ 4474270 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_04467142_04474270.mRNA
CAAATAAACAGTGAACGCACTATGATCTTCTTATGTTTACAACTGTTCGCCAAATCCAAAGACAACAGGTGTATAGGCTGGGAGAAAAGACGCTCTCCAATGGAAAGAAACGCAACTGAAGATCTTATGTTGTCACAGGGCATGGATTTAAGTAGAGTTCTGGTAGTAGTCTTCAGCATGGTTGCCTCTGAACTGTCTAGCGTTCAAACTAGACCAATTGACTTTGTGTGTGATAGCGAGGCCAGAAGAGTGATGAACAAAGTGAAGGACTTACAAGAGGAAATGAAAGTCTGCAGTGCTGTAGATGCTCTACCCTCTCCTATTCAATTACCATGCGTCGGCATTCACAAACCAACCTGGGAGAGAAAATCAGTGCATGAGTGGAGGGCTGAGATCCTGCTGTCTTTGGGGACTCTAGCGCAGGATGTGCGGTCTGCCAGGACACAGAGCCAACCTGGCTGTAGATTCAATCTGCTAGAGCGCTTGGAACGCAGTATCAACAACTACCTGCATGTAGTCAGACTACTCTACATTGAGGAAAGAAGTGGAGATAGCGACACATACTTGACCCGTGAGAAGGATGGGAACATGCAGGGGGAGCAAGTAGTGCCCCAGGCAGAGAGATGTCTGGGTCAGCCCTCTAAGGATTTGGGTTTGGTGTTGAAGAACTTTGGGAGACTTCTCACAGGCAAGTTGGAGTGGCTCATTGCTGAGATGGAAAAGGGGTGCCATGACTGAAAAACTGACTTCTAAGTTCGGCTTTCTTCAACCTTGTGTAATGGGACCAGATAGGCCCAATCCATTTTAACAATGGTCCACCTTCAAGACAAGGGAGGGCCATGCACTTTGCCGGAGACCACAGAAGAGAAAGTACACTTACAGAAGAGAAAGTACATGATATGTAAATGACAAGACTCTGCCATCTACTGGATCATAGCTGAACTGACTCACCTGTTGACATGCACCCACTAGAAATTTTAAAACATACAAACTGTTCTGAACTGAAAACTTTTTTACACCACAGATTATATTTATTTATTTTATAGGCTGCATTAAAGTTGAATTGACTCTACATGGTGTGATAGCACATGGAAGACAACCTGAAGACAATAAA

Function

NR:

description
thrombopoietin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_04467142_04474270.mRNA True 1114 mRNA 0.45 8 4466766 4474270

Neighbor

gene id symbol gene type direction distance location
CI01000004_04438520_04452913 ZFYVE9, ZFYVE9A coding downstream 13813 4437711 ~ 4452953 (-)
CI01000004_04406215_04410740 CDC20 coding downstream 56026 4406215 ~ 4410740 (-)
CI01000004_04375211_04379590 NA coding downstream 87176 4375110 ~ 4379590 (-)
CI01000004_04361874_04362518 NA coding downstream 104050 4361661 ~ 4362716 (-)
CI01000004_04267237_04294023 NA coding downstream 172656 4266726 ~ 4294110 (-)
CI01000004_04539835_04546982 FAM131A coding upstream 65282 4539552 ~ 4546982 (-)
CI01000004_04557685_04579456 EIF4G1A coding upstream 82183 4556453 ~ 4579456 (-)
CI01000004_04594923_04600816 NA coding upstream 120420 4594690 ~ 4600840 (-)
CI01000004_04615072_04627283 UBXN7 coding upstream 139639 4613909 ~ 4627283 (-)
CI01000004_04630333_04635078 PPP1R7 coding upstream 155013 4629283 ~ 4635078 (-)
G27483 NA non-coding downstream 30260 4436180 ~ 4436506 (-)
G27515 NA non-coding downstream 111729 4354725 ~ 4355037 (-)
G27488 NA non-coding downstream 112651 4353681 ~ 4354115 (-)
G27511 NA non-coding downstream 131330 4335106 ~ 4335436 (-)
G27505 NA non-coding downstream 143416 4323095 ~ 4323350 (-)
G27564 NA non-coding upstream 42947 4517217 ~ 4521614 (-)
G27579 NA non-coding upstream 210274 4684544 ~ 4684745 (-)
CI01000004_04712970_04717937 GRK7, GRK7A non-coding upstream 243962 4712287 ~ 4718671 (-)
G27598 NA non-coding upstream 244559 4718829 ~ 4719096 (-)
G27599 NA non-coding upstream 245411 4719681 ~ 4720243 (-)
G26788 NA other downstream 1191045 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 2691825 1772928 ~ 1774942 (-)
G27746 NA other upstream 703957 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 1146113 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 2060557 6538904 ~ 6541252 (-)
G29388 NA other upstream 2157023 6631293 ~ 6631907 (-)
G29656 NA other upstream 3490094 7964364 ~ 7965500 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015333 thpo coding NC_007113.7 CM002886.2 17055069 ~ 17072559 (+)