CI01000004_05238552_05246750 (TECRL2B)


Basic Information

Item Value
gene id CI01000004_05238552_05246750
gene name TECRL2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 5237204 ~ 5247114 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_05238552_05246750.mRNA
ATTTAAAAACAGGGTAAGTGAGCCTTTACTGTCTTACAAACTCTTTTCAAGATTCAGGATTTCCATAGTTAACTCAAGAGTGTGTCCTGCTATACCAGCCCAGAGCTGCCCTAAATCATCTTCAGCATATCTCAATGTTCTCTTCCACTTTGGTCATGGAAATGAAGGTCAGTAGAAAGAATCACTGATTAAATCTCATGTATCAAGGTTTCAACAGCATCTGCATTTTATCTCTAAAACAAATAACCGGACAAACATCTCCAGTGGGGAAAATGCTGGTTCCCATCAACAGTCAACCCAAGCAGGTCCTCTTAGAGTGATTATAGGATGTTAAAATAATTAGTTCCCCATTTCCCTCTTCAAATCCATCTGGAAATGAAAATGCCTTTACTTCCTTTGTTTCTATCCCTTTTTTTTATAATGCTAGTTCCATTAGTATTCAGTTTAAGGGTTATCAAACCGTTCATGGAGTCTCCATTTTAAATAAAATAAGGTTTGTTCTACAGCATGGTTCAAGCTCTTCAAAAAATATATTTTTTATTAAAATTAAAAAAATGTTTCTAAAAGACTACAATACAGATATGTGAGTGCATGTTTGAAGAAACCTGCATCCTTGTATATCCTGTTAGCAATGTACAATTTCTTGCAGCGAATTCAAAATTCACGTTTGACTGAAATTAAATGTGTGTTGTAGAACAACATGAAAGTCTCTTCAAGTATAACCATAAATCCAAAACTGCCATAGTAAAAAAAAAAAAAAAAACATTAGAGATTCCCAAGGAAATTAATAGCTCGAAAAAGCTAATTATTTTAGGTTTTAATACTGAATAGCATTATTCTGTTGTATAAGAGTGAACATAGCAGCAGAAGAAACACGAGCTCTTGTGTACGTAAAGAGAGTGAGTGCTGCCTCCTAGCGGTGAAAAACTATACAATTATGAGTATTAATGAACAAAGGACATCATCAGAGTTCTCAATTTTTTTAGTAAGGCAGGAAAATTGTGTAACAAAATCACTGAGTTGTCTGTAAACTGAACTCATTGCTCATTATGAAAGAAGCCCACTTCTTAAAATTACAACAAGCATTTACTCTCTGCTTCCTGCACACTGTTCTGTCAGTCACTGTAATTAGCGCAGTTGTCCCATCCTCAGCACCTCTTGATGTATGCCTGGTTCTATGGCTAATTATCCACTGTATTGATCACTGGAGACAACTGTCTATTTATTTCCAGCAGTAGAGAGCAGTTACTCTCCATTTGACATCCTCATTAGGATTCAGCAGAAGATATTTAGTGGACTGATAACATCTCATTCAACAAAAGCAAGGCAGGGTTACATATGAGGAATTATGGCCTGTTCTGCTCATATGGACATGCTGGATGAAAACATTGATTCTTTCAGAGGTTGGGAATCAATTGTGTGGCATGGATTTCACCTGGAGGACTGGAGGAGACATGGAGTCATTAATAGAGTTGCCTATTTTGAGCTGGTAATCAAAGCTAGAATATCAATGAAAGTCCGTATATGTTTAAAGCGTGATGGGGGGCGGTCTCCCCTTACCAGAAGGATTAAACTCAAACCAGATGATGATATGATAGTTGACAGTGTTATTGAAATTCAGAGGTGCAGCGGAGCTGATGAATTGCCCCTCACCGTCAGAGATAAATTTAGACCAGCTTGCAGCTCTAAATCCAAGACATGCCCCTCACGTCTCTTTGCGGGGTCTTATCGCTTCACCCTCCCTGGCATCAGTATACCAACCACCAAAATCAGGGCTCACCTACAGCCCTCAGGCATCATGGAATGTCTGGACTTAAGGGATCTCTTCACCGTAGCCCATTTTATAAAGGCCAGGTGTGACCACGGCCTGAAAGCTGGTGCAACCAAGGATAAGAATTATGTCTTTTTTGAGGTGGAGATCCTGGACCCCAAGAGCAAGGCGCAACTCTGCTACCTGGATAAGGTGGAGCCCAACGCCACCATCGCAGAGATCAAGACATTGCTGCACAAGATTTATCCCAAGTTTTATCCATCAAGACAGGCACTGAAGCTGCATCCTGAGGGAAAGGCCCTCAGTGATGATGATGTGCTGGAGGATTTACCAGTTGGCACGACCGCAACAATGTTCTTTCAGGACCTCGGCCCACAGTTAGGTTGGACTATGGTATTTCTGGCAGAGTGTCTTGGGCCGCTTTTCATTTACCTGCTATTCTACTATCGGCTTCCATACATCTACAGGCATGAGTATGACTACACCCAAAGTCCATTGAAAGTTGTCAAACTGGCTTGCTGGTGCCACTCTCTTCATTACATTAAGAAGCTTGTGGAAACTATTTTTATCCATCGCTTTTCTGACGGAACATTACCTTTACGCACCATCATGCTGCTCTGTCTGTACTACTGGGGATTTGCATCATGGCAGGCATATTACATCAACCATCCACTCTACACACCACCAAGCTATGGGAGACTCCAGATCTACTCTGCACTGGCAATGTTTTTGGTCTGTGAGTTTGGCAATCTCTCAGTTCATCTGATTCTGAATCGAATCAGCTGTAATGAATCCAGTTATATCAGATATATTTATTACCGCATTGCCTTACGATCTTCTTACACATCGACAGGGTCCAGGCCTACAGAGATTCCTTATCCCACAAAGAATCCATTGACTTGGCTGTTTTTCTTCGTGTCCTGCCCAAACTACACATATGAGGTTTGTCAAGTGTACAAAGTGGGATCATGGATCAGCTTCACAGTCATGACACAGTGTGTTCCAGTTGGAGTCTTCACATTTTTGGGGTTTATTCAGATGACTATATGGGCTCGGGAAAAGCATAAAACCTACACCCAGCAATTCGAAGACTATCCTGACCTGAGAACGGCCATCATTCCACTCTTCTTCTAGATCTGTTGGATGGAGGATGAACCTACATGCACTTTTGTCATTGGATTCCTCATCAAACATAATATTGTAAGCAGCACTGTACTCTCTGAAGTTTGAAATGGTAATTAGTAATTACTAGCAATTACATTTATTATAAAGAGGCTTACTGAGCATAAACTAAGATTATACAGCAACGTCAAGGAAGATATACTAACAGTGACTAATACTTCATGTGCAGGAGGCGTATGTATCACAAACTTAAACATTTGCTTTACAACAAAGAGTGTAAGTTGAGTCCCGATTGAAGGTCTTCAGACCATCAAGCAGAAAACATGATGTACAGTGTGATCCTCTTTTATTGTTAAATATTCATTTTTGTATTACA

Function

symbol description
tecrl2b Predicted to enable oxidoreductase activity. Predicted to be involved in very long-chain fatty acid biosynthetic process. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in catecholaminergic polymorphic ventricular tachycardia 3. Orthologous to human TECRL (trans-2,3-enoyl-CoA reductase like).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_05238552_05246750.mRNA True 3269 mRNA 0.40 14 5237204 5247114

Neighbor

gene id symbol gene type direction distance location
CI01000004_05227614_05231253 OLFM3, OLFM3A, OLFM3B coding upstream 5152 5227614 ~ 5232052 (+)
CI01000004_05154049_05203177 COL11A1B, COL11A1 coding upstream 34027 5154049 ~ 5203177 (+)
CI01000004_04924543_04956339 VAV3B coding upstream 280769 4924508 ~ 4956435 (+)
CI01000004_04798717_04889650 ARHGEF4 coding upstream 347554 4798717 ~ 4889650 (+)
CI01000004_04786239_04788953 NA coding upstream 448243 4786239 ~ 4788961 (+)
CI01000004_05343381_05353920 NA coding downstream 96267 5343381 ~ 5354231 (+)
CI01000004_05389431_05393230 TMEM56 coding downstream 142256 5389370 ~ 5394211 (+)
CI01000004_05397192_05402109 HCCSA.1, RWDD3 coding downstream 149981 5397095 ~ 5402109 (+)
CI01000004_05454350_05455993 NA coding downstream 206727 5453841 ~ 5455993 (+)
CI01000004_05459139_05467673 PTBP2B, PTBP2 coding downstream 212025 5459139 ~ 5468857 (+)
G27757 NA non-coding upstream 17194 5219615 ~ 5220010 (+)
G27753 NA non-coding upstream 28544 5206848 ~ 5208660 (+)
G27388 NA non-coding upstream 103627 5133205 ~ 5133577 (+)
G27383 NA non-coding upstream 110706 5108262 ~ 5126498 (+)
G27148 NA non-coding upstream 120625 4991403 ~ 5116579 (+)
G27780 NA non-coding downstream 1720 5248834 ~ 5249065 (+)
G27782 NA non-coding downstream 6555 5253669 ~ 5254045 (+)
G27791 NA non-coding downstream 17710 5264824 ~ 5265316 (+)
G27794 NA non-coding downstream 28998 5276112 ~ 5276352 (+)
G27801 NA non-coding downstream 108037 5355151 ~ 5357856 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 1684758 3550329 ~ 3553423 (+)
G26245 NA other upstream 1714811 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 2478266 2745885 ~ 2769135 (+)
G25992 NA other upstream 2500436 2736536 ~ 2736768 (+)
G25882 NA other upstream 2664155 2548075 ~ 2573049 (+)
G27805 NA other downstream 125711 5372825 ~ 5373803 (+)
G28165 NA other downstream 485475 5732589 ~ 5733001 (+)
G28302 NA other downstream 1222914 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 1324106 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 2407658 7654234 ~ 7656383 (+)

Expression


Co-expression Network