CI01000004_07654234_07655677 (MRPL34)


Basic Information

Item Value
gene id CI01000004_07654234_07655677
gene name MRPL34
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7654234 ~ 7656383 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07654234_07655677.mRNA
TGTTTACTTGTTCTGGCCTGTTGGTCGTGCTTGCGTAACATCGAGCTAAAACCACATGCTGCTGGTTTCGTACTCGCTAAATTATCGAAGAAAATTGGCTGCCGAGTTTGCCTGGTGGTACGTAAAGCTACGCTAGCAGAACGTTTACTGAAGACACACTTCCGCTTCCGGCCGCGCAGCTCTCAGATCCAGAGTAATGGCAGTCACCCTAACATATTCAGCTGCAGTCAACTACGCTCTATCAGTTCCATGGTTCTTTCAAGGACAGAGGGCGAGCAAACTTTCCTGCAAGGGAGCTTGAACACCAAATCAGAGGGACCCTGTGTTTTCCAGCAACCACTCTGGCACCATCAACAAGTCCGCACAGTCAAGCGTGGGACAGAATATCAACCAAAGAACATCAAACGAAAGAGGACCCATGGCTGGATCAAAAGAATTAGCGCCCCAGGTGGAATCGAAGTAATCCTGCGCCGAATGCTCAAAGGACGAAAATCCCTCACGCATTGAGACTCTGACCGGACAGTTGCTTTGATATACCTTTGAAGTGAATCTCAGTTAAATGTCAGTTGTGCAGTAGAGCTTCTGAGGTTCTATTTAAAATACTTGTCAAA

Function

symbol description
mrpl34 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL34 (mitochondrial ribosomal protein L34).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07654234_07655677.mRNA False 611 mRNA 0.47 3 7654234 7655781

Neighbor

gene id symbol gene type direction distance location
CI01000004_07642418_07645369 FITM1 coding upstream 8275 7642361 ~ 7647147 (+)
CI01000004_07585030_07601316 NA coding upstream 51521 7584727 ~ 7602713 (+)
CI01000004_07568950_07581744 NA coding upstream 71562 7568950 ~ 7582672 (+)
CI01000004_07515025_07559926 KCNH2A, KCNH6, KCNH2 coding upstream 93833 7515025 ~ 7560401 (+)
CI01000004_07375432_07378296 NA coding upstream 275547 7375432 ~ 7378687 (+)
CI01000004_07686845_07692184 NR2F6, NR2F6A, NR2F6B coding downstream 30237 7686018 ~ 7693082 (+)
CI01000004_07712175_07712384 NA coding downstream 56394 7712175 ~ 7712402 (+)
CI01000004_07759670_07760529 RPS28P9, RPS28 coding downstream 103837 7759509 ~ 7761023 (+)
CI01000004_07775338_07780352 ANGPTL4 coding downstream 119461 7775242 ~ 7781318 (+)
CI01000004_07823292_07824588 NA coding downstream 167055 7822836 ~ 7826203 (+)
G28710 NA non-coding upstream 20656 7620115 ~ 7633578 (+)
G28714 NA non-coding upstream 157370 7491896 ~ 7496864 (+)
G28686 NA non-coding upstream 216498 7437236 ~ 7437736 (+)
G28682 NA non-coding upstream 225472 7427242 ~ 7428762 (+)
G28730 NA non-coding downstream 6126 7661907 ~ 7663273 (+)
G28731 NA non-coding downstream 8944 7664725 ~ 7664993 (+)
G28732 NA non-coding downstream 10291 7666072 ~ 7666828 (+)
G28735 NA non-coding downstream 18616 7674397 ~ 7674628 (+)
G28736 NA non-coding downstream 19059 7674840 ~ 7675478 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1079813 6570771 ~ 6572667 (+)
G28302 NA other upstream 1152147 6470028 ~ 6502087 (+)
G28165 NA other upstream 1921233 5732589 ~ 5733001 (+)
G27805 NA other upstream 2280431 5372825 ~ 5373803 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 4101788 3550329 ~ 3553423 (+)
CI01000004_08414451_08436256 NA other downstream 777924 8414316 ~ 8439933 (+)
G28859 NA other downstream 943454 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1320657 8976254 ~ 8980984 (+)
G30797 NA other downstream 2841595 10497376 ~ 10497788 (+)
G31710 NA other downstream 3981470 11637251 ~ 11642400 (+)

Expression


Co-expression Network