CI01000004_07375432_07378296


Basic Information

Item Value
gene id CI01000004_07375432_07378296
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7375432 ~ 7378687 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07375432_07378296.mRNA
ATGTGGATCAACAACCCACCATCAAACAACGACCATCACCGCTGTCGAGCGGGTTCAGTGACCTCTGCATGTGTCTTGAATTCTCTGACGGGTCTTGAGACAGTTGCTGAAAAAAAGTACTGTTGGTATTTCGAAGGAGATTATCCAGTATACTTCATATGCAAGACATATGAGGACTGCTGTGGCACACAATGCTGTGTTCGAGCCCTTTCTGGTCAGAGAATATGGTATTTCTGGCTGTTGCTGATCATTGGAATTCTGTGCTGCTGCAGTACTGGGTACTTCATTCGCAGACGTGTCCACCCTTACCCTCCACCTGGGGAACCTGATTTTAACGTGGCTTTCACCAGACACCCCATCATATCTCCAGGACTGCATCAGGCTGGCTTTCATAGTTATGGAGACTCAGAGACTGCAGTAATTTCCACCGTCTACCCAGTGCAGACCCACCCCGGTCACATGACTGCAGTGTATTCAGCCCTGCCGTCCTACTACAGCCAGCCTCCTCCTTCCTATGATCAGGTCATGCAGGACTTGCAGAAGAAATAAACAGAAGAACACAGTGTCCCGAGCAACAACCCTACAGATCCTCAGTGACTTACTCAATCTTAAAGTCTGTGAGGTGAAAGGAACAAAGAAAGAAAGAAACTGAAGAAACTCAACAACTCAGGCATCACTGGAGGAAACAAACTTACAAACTGAAGTAAGAGTACAAAAACAAAAATATAGAGACACTGAAATGCCTCTATCTTTCTATCAGCATAAAAGACACAGAGTCAGAGGTAATAGTAGATCTGTGTAACAACAGCCTAAACAAACTGCTTATGCGGTATAATTTTACTAAATTGTTAAAAAAAATCTAAAAAGATTTTATTTTCATACTTAAAAATAGAGTGCTCTAAAAGTATCAAACATTTTATTTCTTCACTCATAAAGGGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07375432_07378296.mRNA True 940 mRNA 0.43 5 7375432 7378687

Neighbor

gene id symbol gene type direction distance location
CI01000004_07366683_07372144 GORASP1, GORASP1A coding upstream 2994 7366683 ~ 7372438 (+)
CI01000004_07360794_07364249 CSRNP1A coding upstream 10833 7359772 ~ 7364599 (+)
CI01000004_07322380_07326368 NA coding upstream 48884 7322266 ~ 7326548 (+)
CI01000004_07319769_07320274 NA coding upstream 54721 7319156 ~ 7320711 (+)
CI01000004_07306344_07318193 OXSR1B, OXSR1, OXSR1A coding upstream 56983 7306257 ~ 7318449 (+)
CI01000004_07515025_07559926 KCNH2A, KCNH6, KCNH2 coding downstream 136338 7515025 ~ 7560401 (+)
CI01000004_07568950_07581744 NA coding downstream 190263 7568950 ~ 7582672 (+)
CI01000004_07585030_07601316 NA coding downstream 206040 7584727 ~ 7602713 (+)
CI01000004_07642418_07645369 FITM1 coding downstream 263674 7642361 ~ 7647147 (+)
CI01000004_07654234_07655677 MRPL34 coding downstream 275547 7654234 ~ 7656383 (+)
G28657 NA non-coding upstream 23202 7352005 ~ 7352230 (+)
G28651 NA non-coding upstream 73444 7301725 ~ 7301988 (+)
G28647 NA non-coding upstream 78091 7297092 ~ 7297341 (+)
G28406 NA non-coding upstream 80034 7289641 ~ 7295398 (+)
CI01000004_07254370_07254880 LYRM4 non-coding upstream 119830 7254370 ~ 7255602 (+)
G28432 NA non-coding downstream 1379 7380066 ~ 7380596 (+)
G28423 NA non-coding downstream 2069 7380756 ~ 7382325 (+)
G28372 NA non-coding downstream 6357 7385044 ~ 7387399 (+)
G28379 NA non-coding downstream 8894 7387581 ~ 7387841 (+)
G28682 NA non-coding downstream 48555 7427242 ~ 7428762 (+)
CI01000004_06571261_06572539 SEP15 other upstream 801011 6570771 ~ 6572667 (+)
G28302 NA other upstream 873345 6470028 ~ 6502087 (+)
G28165 NA other upstream 1642431 5732589 ~ 5733001 (+)
G27805 NA other upstream 2001629 5372825 ~ 5373803 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 3822986 3550329 ~ 3553423 (+)
CI01000004_08414451_08436256 NA other downstream 1055018 8414316 ~ 8439933 (+)
G28859 NA other downstream 1220548 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1597751 8976254 ~ 8980984 (+)
G30797 NA other downstream 3118689 10497376 ~ 10497788 (+)

Expression


Co-expression Network