Gene
RNA
| Item | Value |
|---|---|
| gene id | G28406 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 7289641 ~ 7295398 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32133 | True | 5758 | lncRNA | 0.43 | 1 | 7289641 | 7295398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_07262498_07264843 | RPP40 | coding | upstream | 24048 | 7262273 ~ 7265593 (+) |
| CI01000004_07254370_07254880 | LYRM4 | coding | upstream | 34392 | 7254370 ~ 7255602 (+) |
| CI01000004_07249855_07250697 | NRN1B | coding | upstream | 38208 | 7249591 ~ 7251433 (+) |
| CI01000004_07196152_07199384 | NEBL | coding | upstream | 90227 | 7196152 ~ 7199414 (+) |
| CI01000004_07164273_07167923 | BMI1B, BMI1 | coding | upstream | 121405 | 7164273 ~ 7168236 (+) |
| CI01000004_07306344_07318193 | OXSR1B, OXSR1, OXSR1A | coding | downstream | 10859 | 7306257 ~ 7318449 (+) |
| CI01000004_07319769_07320274 | NA | coding | downstream | 23758 | 7319156 ~ 7320711 (+) |
| CI01000004_07322380_07326368 | NA | coding | downstream | 26868 | 7322266 ~ 7326548 (+) |
| CI01000004_07360794_07364249 | CSRNP1A | coding | downstream | 64374 | 7359772 ~ 7364599 (+) |
| CI01000004_07366683_07372144 | GORASP1, GORASP1A | coding | downstream | 71285 | 7366683 ~ 7372438 (+) |
| G28634 | NA | non-coding | upstream | 40864 | 7248548 ~ 7248777 (+) |
| G28606 | NA | non-coding | upstream | 93989 | 7195049 ~ 7195652 (+) |
| G28405 | NA | non-coding | upstream | 139154 | 7149337 ~ 7150487 (+) |
| G28583 | NA | non-coding | upstream | 151411 | 7137566 ~ 7138230 (+) |
| G28647 | NA | non-coding | downstream | 1694 | 7297092 ~ 7297341 (+) |
| G28651 | NA | non-coding | downstream | 6327 | 7301725 ~ 7301988 (+) |
| G28657 | NA | non-coding | downstream | 56607 | 7352005 ~ 7352230 (+) |
| G28432 | NA | non-coding | downstream | 84668 | 7380066 ~ 7380596 (+) |
| G28423 | NA | non-coding | downstream | 85358 | 7380756 ~ 7382325 (+) |
| CI01000004_06571261_06572539 | SEP15 | other | upstream | 715220 | 6570771 ~ 6572667 (+) |
| G28302 | NA | other | upstream | 787554 | 6470028 ~ 6502087 (+) |
| G28165 | NA | other | upstream | 1556640 | 5732589 ~ 5733001 (+) |
| G27805 | NA | other | upstream | 1915838 | 5372825 ~ 5373803 (+) |
| CI01000004_03550525_03552621 | PTGER4C | other | upstream | 3737195 | 3550329 ~ 3553423 (+) |
| CI01000004_07654234_07655677 | MRPL34 | other | downstream | 359374 | 7654234 ~ 7656383 (+) |
| CI01000004_08414451_08436256 | NA | other | downstream | 1138307 | 8414316 ~ 8439933 (+) |
| G28859 | NA | other | downstream | 1303837 | 8599235 ~ 8599603 (+) |
| CI01000004_08976512_08980033 | TTPA | other | downstream | 1681040 | 8976254 ~ 8980984 (+) |
| G30797 | NA | other | downstream | 3201978 | 10497376 ~ 10497788 (+) |
