Gene
RNA
| Item | Value |
|---|---|
| gene id | G28606 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 7195049 ~ 7195652 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32348 | True | 604 | lncRNA | 0.36 | 1 | 7195049 | 7195652 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_07164273_07167923 | BMI1B, BMI1 | coding | upstream | 26813 | 7164273 ~ 7168236 (+) |
| CI01000004_07084569_07087489 | KLHL40A | coding | upstream | 106951 | 7084379 ~ 7088098 (+) |
| CI01000004_07075959_07081717 | HHATL, HHATLA | coding | upstream | 113208 | 7074308 ~ 7081841 (+) |
| CI01000004_07043037_07053182 | PLCD1B | coding | upstream | 141308 | 7042393 ~ 7053741 (+) |
| CI01000004_06989955_07000066 | NA | coding | upstream | 194816 | 6989562 ~ 7000233 (+) |
| CI01000004_07196152_07199384 | NEBL | coding | downstream | 500 | 7196152 ~ 7199414 (+) |
| CI01000004_07249855_07250697 | NRN1B | coding | downstream | 53939 | 7249591 ~ 7251433 (+) |
| CI01000004_07254370_07254880 | LYRM4 | coding | downstream | 58718 | 7254370 ~ 7255602 (+) |
| CI01000004_07262498_07264843 | RPP40 | coding | downstream | 66621 | 7262273 ~ 7265593 (+) |
| CI01000004_07306344_07318193 | OXSR1B, OXSR1, OXSR1A | coding | downstream | 110605 | 7306257 ~ 7318449 (+) |
| G28405 | NA | non-coding | upstream | 44562 | 7149337 ~ 7150487 (+) |
| G28583 | NA | non-coding | upstream | 56819 | 7137566 ~ 7138230 (+) |
| G28598 | NA | non-coding | upstream | 57889 | 7136504 ~ 7137160 (+) |
| G28596 | NA | non-coding | upstream | 60106 | 7134743 ~ 7134943 (+) |
| G28595 | NA | non-coding | upstream | 60361 | 7134475 ~ 7134688 (+) |
| G28634 | NA | non-coding | downstream | 52896 | 7248548 ~ 7248777 (+) |
| G28406 | NA | non-coding | downstream | 93989 | 7289641 ~ 7295398 (+) |
| G28647 | NA | non-coding | downstream | 101440 | 7297092 ~ 7297341 (+) |
| G28651 | NA | non-coding | downstream | 106073 | 7301725 ~ 7301988 (+) |
| CI01000004_06571261_06572539 | SEP15 | other | upstream | 620628 | 6570771 ~ 6572667 (+) |
| G28302 | NA | other | upstream | 692962 | 6470028 ~ 6502087 (+) |
| G28165 | NA | other | upstream | 1462048 | 5732589 ~ 5733001 (+) |
| G27805 | NA | other | upstream | 1821246 | 5372825 ~ 5373803 (+) |
| CI01000004_03550525_03552621 | PTGER4C | other | upstream | 3642603 | 3550329 ~ 3553423 (+) |
| CI01000004_07654234_07655677 | MRPL34 | other | downstream | 459120 | 7654234 ~ 7656383 (+) |
| CI01000004_08414451_08436256 | NA | other | downstream | 1238053 | 8414316 ~ 8439933 (+) |
| G28859 | NA | other | downstream | 1403583 | 8599235 ~ 8599603 (+) |
| CI01000004_08976512_08980033 | TTPA | other | downstream | 1780786 | 8976254 ~ 8980984 (+) |
| G30797 | NA | other | downstream | 3301724 | 10497376 ~ 10497788 (+) |
