CI01000004_06989955_07000066


Basic Information

Item Value
gene id CI01000004_06989955_07000066
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6989562 ~ 7000233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06989955_07000066.mRNA
CTATAAGTGAGAAGCATCAGCACATAATAAGCTCAGCTGAGAGTGTGGGAGAGGGAATAGGTGTAGGTGAGCTGTAGGGTAACCTTTTGAGGCAGATCTGATTATTTTCCTTCTCTCTATGTAGTGAAGTGGGCAGAACCGGCGTGAGAGAGGCCCGGCTCTAAGTGGGTTGCATTTGAGGGTGGGCAGGTCGCCACCACAGGGACGAGAAGATGCATGGTGCTGCCTCGTGACAGATGTGTCATCATCACCGCGCCAGCCACAGCCAATGTCAGCCCTTTATTGTGAATGTTAAAGGAAGCAGTTAGTTTCTTGATCACTAAATCCAGAAATTTGAAACGGACAGACTTTTCAAACAAACTTTTCCCAGAAGTTTATTCCAGAGCAAGCCAAATGATTGGCTGCGTCATCATTACTGTGCCAGTGGCAGCCAATCGCAGGCCTGTCTTTGAATGGTTAAAGGAAGTGGTTAGCCTCTTGATCACTAGGTATTACTTTACCAGCATCCATGTTCAAGCCCACATATTATGGACTATAAAGGAGTTTATGTCTCAGCGGAGAGAAGAGGAGTCAGGGGTGGAAAAAAAGGGAAGAGGAGACTTTTTTATCGCCCTGAAAGAGTGTCAAGATTTGCGCAACCCCTTGGATGCCTGGCATGAGATAAAGCTCTTGACAACCTTGAGATAGCTCTCCCTTCACCGGCATTCCCGGGAGGGAGCCATTGTCAGAGCCATGGTACCATTGTTGCTTTTGAGTCTTGAATGGGCAGCCTGGGCCATCTGAAATAGACAACTGCATGTCAGGTATTAGATTAACACCCAGACCCAGTCTCTATAAGGTTATAATTATGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06989955_07000066.mRNA True 854 mRNA 0.47 3 6989562 7000233

Neighbor

gene id symbol gene type direction distance location
CI01000004_06973330_06975283 NA coding upstream 13747 6972779 ~ 6975815 (+)
CI01000004_06957791_06959694 RALAB, RALAA, RALB, RALA, RALBA coding upstream 29672 6956014 ~ 6959890 (+)
CI01000004_06952094_06953401 NA coding upstream 36013 6951852 ~ 6953549 (+)
CI01000004_06860789_06892941 CHD7 coding upstream 96057 6860789 ~ 6893505 (+)
CI01000004_06833827_06840024 RAB2A coding upstream 149163 6833827 ~ 6840399 (+)
CI01000004_07043037_07053182 PLCD1B coding downstream 42160 7042393 ~ 7053741 (+)
CI01000004_07075959_07081717 HHATL, HHATLA coding downstream 74075 7074308 ~ 7081841 (+)
CI01000004_07084569_07087489 KLHL40A coding downstream 84146 7084379 ~ 7088098 (+)
CI01000004_07164273_07167923 BMI1B, BMI1 coding downstream 164040 7164273 ~ 7168236 (+)
CI01000004_07196152_07199384 NEBL coding downstream 195919 7196152 ~ 7199414 (+)
G28548 NA non-coding upstream 17428 6971358 ~ 6972134 (+)
G28536 NA non-coding upstream 75622 6913645 ~ 6913940 (+)
G28535 NA non-coding upstream 76674 6912617 ~ 6912888 (+)
G28516 NA non-coding upstream 224158 6749079 ~ 6765404 (+)
G28515 NA non-coding upstream 243336 6746024 ~ 6746226 (+)
G28565 NA non-coding downstream 54352 7054585 ~ 7055017 (+)
G28574 NA non-coding downstream 98241 7098474 ~ 7098920 (+)
G28595 NA non-coding downstream 134242 7134475 ~ 7134688 (+)
G28596 NA non-coding downstream 134510 7134743 ~ 7134943 (+)
G28598 NA non-coding downstream 136271 7136504 ~ 7137160 (+)
CI01000004_06571261_06572539 SEP15 other upstream 415141 6570771 ~ 6572667 (+)
G28302 NA other upstream 487475 6470028 ~ 6502087 (+)
G28165 NA other upstream 1256561 5732589 ~ 5733001 (+)
G27805 NA other upstream 1615759 5372825 ~ 5373803 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 3437116 3550329 ~ 3553423 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 654539 7654234 ~ 7656383 (+)
CI01000004_08414451_08436256 NA other downstream 1433472 8414316 ~ 8439933 (+)
G28859 NA other downstream 1599002 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1976205 8976254 ~ 8980984 (+)
G30797 NA other downstream 3497143 10497376 ~ 10497788 (+)

Expression


Co-expression Network