G28565


Basic Information

Item Value
gene id G28565
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7054585 ~ 7055017 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU32299
CTAGACATTGAATAAAGTCGTTATTTTGTTTTGGGGTTTTTTGGCGCACAAAAAGTATTCTCGTTGCTTCATAACATTAATGACACAATTTTCATTTTTGGGTGAACTAACCCTTTAACCATAGTAAATTTGTTAGATTAAATGTGACTACAGAGGGTCTGACGCTCTTTGGATCATTTTAAATCATGCTGGAGAACATGATCAGGTTTGTCACAAATGTGTGGAGTTCATGATTGCTGCTGCCATTAAATCACATACATTTTGAAATGAATCATTAATCAATGATAACTCAACGATATTATTTGCTAAAATGTTATTAAATTAAATGCAAATTTTTTTTACTAGCAATCTGACTTTTGGACCCTACTGTATTTATTGAAATAAAATTATTGTAAAAAATGTTTAGTAGGTTAGAAGAATATTTTTGTTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32299 True 433 lncRNA 0.29 1 7054585 7055017

Neighbor

gene id symbol gene type direction distance location
CI01000004_07043037_07053182 PLCD1B coding upstream 844 7042393 ~ 7053741 (+)
CI01000004_06989955_07000066 NA coding upstream 54352 6989562 ~ 7000233 (+)
CI01000004_06973330_06975283 NA coding upstream 78770 6972779 ~ 6975815 (+)
CI01000004_06957791_06959694 RALAB, RALAA, RALB, RALA, RALBA coding upstream 94695 6956014 ~ 6959890 (+)
CI01000004_06952094_06953401 NA coding upstream 101036 6951852 ~ 6953549 (+)
CI01000004_07075959_07081717 HHATL, HHATLA coding downstream 19291 7074308 ~ 7081841 (+)
CI01000004_07084569_07087489 KLHL40A coding downstream 29362 7084379 ~ 7088098 (+)
CI01000004_07164273_07167923 BMI1B, BMI1 coding downstream 109256 7164273 ~ 7168236 (+)
CI01000004_07196152_07199384 NEBL coding downstream 141135 7196152 ~ 7199414 (+)
CI01000004_07249855_07250697 NRN1B coding downstream 194574 7249591 ~ 7251433 (+)
G28548 NA non-coding upstream 82451 6971358 ~ 6972134 (+)
G28536 NA non-coding upstream 140645 6913645 ~ 6913940 (+)
G28535 NA non-coding upstream 141697 6912617 ~ 6912888 (+)
G28516 NA non-coding upstream 289181 6749079 ~ 6765404 (+)
G28515 NA non-coding upstream 308359 6746024 ~ 6746226 (+)
G28574 NA non-coding downstream 43457 7098474 ~ 7098920 (+)
G28595 NA non-coding downstream 79458 7134475 ~ 7134688 (+)
G28596 NA non-coding downstream 79726 7134743 ~ 7134943 (+)
G28598 NA non-coding downstream 81487 7136504 ~ 7137160 (+)
G28583 NA non-coding downstream 82549 7137566 ~ 7138230 (+)
CI01000004_06571261_06572539 SEP15 other upstream 480164 6570771 ~ 6572667 (+)
G28302 NA other upstream 552498 6470028 ~ 6502087 (+)
G28165 NA other upstream 1321584 5732589 ~ 5733001 (+)
G27805 NA other upstream 1680782 5372825 ~ 5373803 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 3502139 3550329 ~ 3553423 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 599755 7654234 ~ 7656383 (+)
CI01000004_08414451_08436256 NA other downstream 1378688 8414316 ~ 8439933 (+)
G28859 NA other downstream 1544218 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1921421 8976254 ~ 8980984 (+)
G30797 NA other downstream 3442359 10497376 ~ 10497788 (+)

Expression


Co-expression Network