CI01000004_07319769_07320274


Basic Information

Item Value
gene id CI01000004_07319769_07320274
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7319156 ~ 7320711 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07319769_07320274.mRNA
GTATATATAGGCAGAAAATGTGTTCACATGCAACTGGTATTTTATTGTTTTTGCTCACCCTTTACTGGGTTTATTATTATTAATTTTAGTGAGGTTTTTCACTCCACCTCATTTCATTTTTTTATTTTTTTCCAGTTAATTTCCCTCCTTGGCTTCCAACAAACAGTTAATTTAAAGGTGGTTTTAAAACCGATTAATTGTAGACATGGTCAGTGATTCATTCGCTGTCACTTTCGCACTTGTGTGTATGTGCAAATGACTTGAATTATTATTATTTTTTAAATATATTTAGTGTGAATACAACAATGAATGTGGGTGGGGCATCTTAATGAGTACTTGATAAAAAAAAAAAAAACATGTAAATAATGAAATTGGTGTTGTTTATATATAATATAAACAGTATACATACCGTTCACAGTTGGCCTTTCTATGGACTCGACGTGGTGGTTTGTCTCATGTCTTTTTTTTTTGTTGTCTTCTCTCTGTTCGTAGTCAAAAAAACGCAACACTTCGCTCAAAGGGTTTCATTACTGAAAATGTCACCCATAAAAGATTACATTAGCATGACTTGAGTGTTTTTTTTTTTTATGTTCTGAGTTCTACTTTGTCAACAATGGCGGTCTATTTTTGTTTTCCTGCATTTCGGTTTCTGCCTTGCTGTCTTTGTTTGGTCGTCATTGTTGGACTGGTTGGTGGGATTCTTAAAAAGAATGCTTGTGGTATTGATAGTGATATGAAGTATTTATTTTCACGTGTGCACAAGTGGTTGGCCCTTTCCTGGAGTTCATTGGAAGTAATTCATCTGAGCACTTTGAAAATCGAAAGCATATTCTGGTTTCTCATTTGTATGAATTCTTAAAGATAATTAAATCAGCTGATTTTTCTTCAGATTGACACATCAGATCTTGTTGATCTCTCCATGCTTCTGTTTTTCTCTCTGGTGATGTTTCTGTGTTGAGGTGAGTTGTCTAAGGTCATTCCATCAGTCTGGAGGGCTGCTGTATTTTCACACCAAGCACATGTATGCAGGTCTCAAAGAGTTTCAAAGAGGGATTAGCTCCATTTTAGTGGAATATTTAAGTGTTTCCAATTAAAAAAATTTAGTGTCTTTTCAATTGTTTTTCATGTTTTTATCTCATTGAACTGCAAGGATTGAACTTTCACGACACAACAGCAATGGAGGTATTACTGTCACTCACAGTATGGTGTGTTAAGGACAATGGTAGAACACTGTATAGTATTTCACTTTTTGGGATTTTCAGTGCATGTGTAACCAATTATTTTTAATAATAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07319769_07320274.mRNA True 1296 mRNA 0.34 2 7319156 7320711

Neighbor

gene id symbol gene type direction distance location
CI01000004_07306344_07318193 OXSR1B, OXSR1, OXSR1A coding upstream 707 7306257 ~ 7318449 (+)
CI01000004_07262498_07264843 RPP40 coding upstream 53563 7262273 ~ 7265593 (+)
CI01000004_07254370_07254880 LYRM4 coding upstream 63907 7254370 ~ 7255602 (+)
CI01000004_07249855_07250697 NRN1B coding upstream 67723 7249591 ~ 7251433 (+)
CI01000004_07196152_07199384 NEBL coding upstream 119742 7196152 ~ 7199414 (+)
CI01000004_07322380_07326368 NA coding downstream 1555 7322266 ~ 7326548 (+)
CI01000004_07360794_07364249 CSRNP1A coding downstream 39061 7359772 ~ 7364599 (+)
CI01000004_07366683_07372144 GORASP1, GORASP1A coding downstream 45972 7366683 ~ 7372438 (+)
CI01000004_07375432_07378296 NA coding downstream 54721 7375432 ~ 7378687 (+)
CI01000004_07515025_07559926 KCNH2A, KCNH6, KCNH2 coding downstream 194314 7515025 ~ 7560401 (+)
G28651 NA non-coding upstream 17168 7301725 ~ 7301988 (+)
G28647 NA non-coding upstream 21815 7297092 ~ 7297341 (+)
G28406 NA non-coding upstream 23758 7289641 ~ 7295398 (+)
G28634 NA non-coding upstream 70379 7248548 ~ 7248777 (+)
G28657 NA non-coding downstream 31294 7352005 ~ 7352230 (+)
G28432 NA non-coding downstream 59355 7380066 ~ 7380596 (+)
G28423 NA non-coding downstream 60045 7380756 ~ 7382325 (+)
G28372 NA non-coding downstream 64333 7385044 ~ 7387399 (+)
G28379 NA non-coding downstream 66870 7387581 ~ 7387841 (+)
CI01000004_06571261_06572539 SEP15 other upstream 744735 6570771 ~ 6572667 (+)
G28302 NA other upstream 817069 6470028 ~ 6502087 (+)
G28165 NA other upstream 1586155 5732589 ~ 5733001 (+)
G27805 NA other upstream 1945353 5372825 ~ 5373803 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 3766710 3550329 ~ 3553423 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 334061 7654234 ~ 7656383 (+)
CI01000004_08414451_08436256 NA other downstream 1112994 8414316 ~ 8439933 (+)
G28859 NA other downstream 1278524 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1655727 8976254 ~ 8980984 (+)
G30797 NA other downstream 3176665 10497376 ~ 10497788 (+)

Expression


Co-expression Network