CI01000004_07568950_07581744


Basic Information

Item Value
gene id CI01000004_07568950_07581744
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7568950 ~ 7582672 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07568950_07581744.mRNA
TAGGATGGACTTCAGTTTACGTGATGCTTTCACAGATGGAGCATCTAAGTCGACCCAGGACAGCCTGCTGAAGAGGGATTTTATGGCCGGGTTGGAGGCACAGACCTTTGATGATAAAGTGGGCGAGACCGTTGGGAAGACAGAGTACCGCCCCCTTCTGGATGGGATGGATGGGAAAAGGGAAGGAGAATACGCAGAAGTGTTGACCTTTATGATCTTGACAGAATGCTTAGACATCAATACAGCAGGATGCACTCTCAACAAGAGCAAGAGGTTTTATAATTTGGCAGGAATCTTTCAAGCATTTGGCCAGACTGGAGGTCAACGTCAGGACCCTCAGGGAGAGATCCGTCCCAGCCCTCCTGGACAATATGTCTATAATAAGAATGACTTTCAATCAGGGTTCTCTCAGCCTGGGATGAATATTGGTATGAATATGAATGTTGGCATGGCCCCTTTCCAGAGCTCCAAACCCCCCAGCATGGTTGAACCTCAGAAGACCTCACCCTTGTTTGCCAATGAACCACCCAAACCATCCCAGATAACTGCTAATCCAAGTGAAACAAGCCCTCGTAACAGCCAGGAAAATTCTGCAGAAGTTTGTGGAAGCCCTTGGACAGGTGAGGAAATGCTCTCAACGGAGCAGTCCCATGCTTCCAACAAGGCAGAACAGAGCTGCACTGATGCCTTGGGTTCCCAGAGTCAAGATGCAGCGTCTGGTGAGGAAAAGTCCATTAAGGAAGGAACCGAGAAGCAGCAGAAGCGTAAAAAAAAGAAACGCAAGAACAGGGAAGAAATGTATGACCTTCTGGACAGTCTTGGTTCCCCTGACTCAGAAGAAACTCCTTCTGAAAGCTCCAACCATGACTGCCCCTCACCTCCCAGTAGGGATGAAGAGATTTGGGAAAGTGAGTTCCAGGAGAAAGGAGGAGGACGCATCAAGGCCAGGAAAAGTAAGAGCAGGAAGAAGCTTCCAGAAGAATGGAGTGCTCCCTCAACCGTTATGGACATGGACTTTAACAGCCCTAATTTGGGCGATTCTAAGCCCCCATCCACTGCTAGCATAGATCAGGGAAGTGCACCACCCTCACTCACACCTGAACCTTTGCACCTCACGAACACCCAAGCATGCAGACCACAACCGACTGGGCAGGAAAACACCTCCATATTCTCAAATTACCCCAACTCCACTGCGAATCCCATAGATGACTCAACACTCAAGATTGACAGGGATATGCTTCATAAGGATAAATCTAAAGATGATATTAATAAGACTAACCTAGACTTGCCTGGTATTCATCGTTCAGATCAGTTACCCGTGGACTCAAAGACTGACCCTACTCACCCAACTGATCCCAACCAGAAGTCAACCCTTGCCCTCAGTCCAACTCAGACTGTTATGTTCCTTGACTCCGTGCTGCAGGCACAGACCCCAGATGCAAGCCCCCCATCCCAGAGCACCCATGTGAAAACCCCCATCCCTCACACCACTGCCCCAGAGACTGCTCCCAATCTGACCCCTAGTCCACTGTCCGTCGGCACAGACATCCCTGCCTCTCAGAGTGCACCAGCTGTTAGTCACTGCACCCCAACAATTCCCCCCAGCACTGCAGTGAGCTTAAACTCCGAAGCTACGCCCTTCATCCCATCAATCACAGAGCAGCAGGAGCCCCCGCTGGCACAGCCCCCCCTACTGGAAGCCAAAAAACTCAAGTTGCAAGTATGTGTTAATGATGTTCTTTTCTTCTTCTTTTCATGTTCATCACTGTTTGGACAACACTGGACATCAACCAGGACCCTAATATCAGCAGCTGCATTGACGGGGAGACTGTTGCTATGGATATGGGAGGCGGTTTCCTTGGTGATGCAGCGAATAGGACCTGCCAAAGAACAAGCTAGGGTGTAACTGTAGGATATGTTCCAGAAATAGAAACTCTGTGACATCCCGATTACTCAATGAGCATGCATGCTCTACCCCACTCTGAATGTGTTAAATGCATTTCTGATGCTGTGTTTTCATTACTGAAAAGAACATTGGGATATTTGTAATGATTGTGTACTAGCAATAATTTTGTCCAAAAGCTCTATTTATAGTCATCTTGATACTCTTCTGAACATGAAAAGAGGGTAATATAATATAATATAATAACAAAAAGGATTATATCGACAAACATTATTTGTTTTAACCATAAACTATAGTAAACAGATTAAAAAGGACAACAATTCCTGAGAGAATGTGCTCTAAAAAATGCAGGGTTAAAAACCCTGTTGTTTTAACCCAGCGATTGGGTTAAATGTTTGCCCAACGTGCTGGGTAGTTTTATTTAACCCAACTATTGTTTAAAAATTACTGTTTTGCTTGCTTAAAATGAACCAGAATATGTTGGAAATGATCATTTATTAATATGTTTAATAAATGAACATTTATTAAAAAGTTTAATAAATAATAATTAAACAATAAACATTTATTAAATTGCTTATTAATAAATGTTCACCTTTTGATTATTATTGTTGCCTCTAGTAATTATGTGTCTGATTTTTAATTTCCAATCTATTTTGGGTTCATTTTAAGCCAGCCATATAGTAATTTTTAAACAATAGTTGGGGTTAAATAAAACTCCCCAGCACGTTAGGCAAACTGCCGGGTTAAAACAACCCAATTGCTGAGTTTGTCCATTTTCAACCCAACTTGGGTTGTTTTTAACCCAGCATTTGTACCACAATTGAAGATGAAAATGCACAAACAAATGCAATGAAGTGACAGAAAGTTTCAATATCCTCTGTATATTGAACTGTATGATGTGGTGCAATGTGGTCTTAAGGGAATGTAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07568950_07581744.mRNA True 2834 mRNA 0.44 8 7568950 7582672

Neighbor

gene id symbol gene type direction distance location
CI01000004_07515025_07559926 KCNH2A, KCNH6, KCNH2 coding upstream 8549 7515025 ~ 7560401 (+)
CI01000004_07375432_07378296 NA coding upstream 190263 7375432 ~ 7378687 (+)
CI01000004_07366683_07372144 GORASP1, GORASP1A coding upstream 196512 7366683 ~ 7372438 (+)
CI01000004_07360794_07364249 CSRNP1A coding upstream 204351 7359772 ~ 7364599 (+)
CI01000004_07322380_07326368 NA coding upstream 242402 7322266 ~ 7326548 (+)
CI01000004_07585030_07601316 NA coding downstream 2055 7584727 ~ 7602713 (+)
CI01000004_07642418_07645369 FITM1 coding downstream 59689 7642361 ~ 7647147 (+)
CI01000004_07654234_07655677 MRPL34 coding downstream 71562 7654234 ~ 7656383 (+)
CI01000004_07686845_07692184 NR2F6, NR2F6A, NR2F6B coding downstream 103346 7686018 ~ 7693082 (+)
CI01000004_07712175_07712384 NA coding downstream 129503 7712175 ~ 7712402 (+)
G28714 NA non-coding upstream 72086 7491896 ~ 7496864 (+)
G28686 NA non-coding upstream 131214 7437236 ~ 7437736 (+)
G28682 NA non-coding upstream 140188 7427242 ~ 7428762 (+)
G28379 NA non-coding upstream 181109 7387581 ~ 7387841 (+)
G28372 NA non-coding upstream 181551 7385044 ~ 7387399 (+)
G28710 NA non-coding downstream 37443 7620115 ~ 7633578 (+)
G28730 NA non-coding downstream 79235 7661907 ~ 7663273 (+)
G28731 NA non-coding downstream 82053 7664725 ~ 7664993 (+)
G28732 NA non-coding downstream 83400 7666072 ~ 7666828 (+)
CI01000004_06571261_06572539 SEP15 other upstream 994529 6570771 ~ 6572667 (+)
G28302 NA other upstream 1066863 6470028 ~ 6502087 (+)
G28165 NA other upstream 1835949 5732589 ~ 5733001 (+)
G27805 NA other upstream 2195147 5372825 ~ 5373803 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 4016504 3550329 ~ 3553423 (+)
CI01000004_08414451_08436256 NA other downstream 851033 8414316 ~ 8439933 (+)
G28859 NA other downstream 1016563 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1393766 8976254 ~ 8980984 (+)
G30797 NA other downstream 2914704 10497376 ~ 10497788 (+)

Expression


Co-expression Network