CI01000004_06121326_06137773


Basic Information

Item Value
gene id CI01000004_06121326_06137773
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6121286 ~ 6137773 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06121326_06137773.mRNA
GTGTCTTAGAAGTTTATGGGATCAGATATATCAGGATTTTTCTGTCATTGCTGTACAGAGACTCGTCCTGCTTGTCCTACTCTGCTCCACTGTCAGTCCACCTGGAGTCAATCTACTTTGGCTATGAATGTGCATTTATCAAGACAGAAGTTGTTTTTATTCCTGTATCCCTTAACCAAATCCTTGTTGTAGATAAAAGAAATGGACAATTGGCTTTGAAAATCTTTCATCATGCCGAGATGGACACTGTGGAGAAGCTAGCTCGTCTGGTTCCATGTGAGCACGAAGACCTGATGAACGTCACTCTGCGACTCCTTCACAACCTCTCCTTTGACACGGGCTTACGCACCAAGATGGTGCATGTGGGTTTGCTGCCCAAACTCACTGCTCTGCTGGGCGATGACACGCACAAGCACATAGCGATGCGTATCCTGTACCACATCAGCGTTGATGACAAATCTAAATCCATGTTCGCGTATACTGACTGCATCCCTCAGATCTGGTGTCCCTCAGGTCTGCTCTGGCAGTTAGCCTGGACCCTCTTCAGTAAGGGAGGATTTAGATCAAACAGCCTCCCTGCTCTGGGTTCTGAACTGCTCATGCAAATGCTCTTTGAACTTGGTGAAGAGAGAATCGACACCGAGCTCATTTCCTTCTGCATCAACCTGGCTGCTAACAAGACTAATGCTCAGATAATCTGTGAGGGTAATGGATTGAAGATGCTGATGAAAAGAGCACTCAAAATGAAGGACCCACTGCTGATGAAAATGATCAGGAACGTCTCACAACACGATGGAACCTTGAAACAACTCTTCATTGACTATGTGGGTGATCTGGCAGCTCAGATCAAGCTGGAGGGCAATGAAGAGTTTGTTATTGAGTGCTTGGGTACAATGGCAAACCTCACCATACCTGACCTGGACTGGGAGCTCCTGCTGAAAGAATACAACCTGGTGCCCTACCTAAAAGACCACCTCAAACCCGGTTCAGCAGAGGATGACCTGATCCTGGAGGTGGTGATCATGATCGGTACAGTGTCAATGGACGACTCCTGTGCAGTCATGCTGGCAAAGTCCGGCATCATTCCTGCTCTTATTGAGCTGCTAAATGCCCAACAGGAAGATGATGAATTTGTGTGTCAGATCATCTACGTCTTCTACCAGATGGTTTTCCACCAGGCCACCAGAGATGTCATCATTAAGGACACTCAGGCCCCAGCTTACCTCATCGACCTAATGCATGACAAAAATGTGGAGATCCGACAGGTGTGTGACAACACTCTGGACATTATTGCCCGGCCACAGCCTATAGGGAAAAACCTGCTCAGACAGAAGCCCTCATTGTGGAATGAAATATATCTGCTGCGGAGGGTCCGGACGGTGTTAGAAGTCTGTGCAACGGAGTATGATGAAGAGTGGGGGAAGAAGATCCAAAGTGAGAAGTTTCGCTGGCATAACTCGCAGTGGCTGGAGATGGTGGAAAGCAGACAGATGGAGGATGCAGAGCCATACCTGTATGGAGACGACCCGGACGCCCTAGAGCAGCCTGATCTCTTCTACAGCACTGACGGTATGATGCCCCCTGAGCCCGGCCTCAGTCCAGACTTCTACAGCCAGTTCCACTCTCAGAATGGAGACTTCAGCGCCTGGTGAGTGAGCAGCTGTTACCCTCATCAGCTTCTCTCACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06121326_06137773.mRNA True 1692 mRNA 0.49 13 6121286 6137773

Neighbor

gene id symbol gene type direction distance location
CI01000004_06074774_06078306 RNF2.L, RNF2 coding downstream 42032 6074669 ~ 6079254 (-)
CI01000004_06016711_06021356 PTGS2, PTGS2A coding downstream 99930 6016382 ~ 6021356 (-)
CI01000004_05976527_05978831 PDCA coding downstream 141532 5975404 ~ 5979754 (-)
CI01000004_05942638_05967553 TPRA coding downstream 153733 5942604 ~ 5967553 (-)
CI01000004_05902667_05905718 NA coding downstream 214434 5902655 ~ 5906852 (-)
CI01000004_06183916_06192361 MFSD12A coding upstream 45357 6183130 ~ 6193478 (-)
CI01000004_06200669_06208703 CSNK1G2, CSNK1G2A coding upstream 61973 6199746 ~ 6208703 (-)
CI01000004_06221889_06232315 MKNK2, MKNK2A coding upstream 83025 6220798 ~ 6232315 (-)
CI01000004_06308316_06314451 AMOTL2B coding upstream 170493 6308266 ~ 6315005 (-)
CI01000004_06325293_06337484 NA coding upstream 187239 6325012 ~ 6337484 (-)
G29172 NA non-coding downstream 75979 6044360 ~ 6045307 (-)
G29153 NA non-coding downstream 152157 5968478 ~ 5969129 (-)
G29132 NA non-coding downstream 277989 5839522 ~ 5843297 (-)
G29130 NA non-coding downstream 282984 5838097 ~ 5838302 (-)
G29129 NA non-coding downstream 284381 5836647 ~ 5836905 (-)
G29233 NA non-coding upstream 37923 6175696 ~ 6175900 (-)
G29208 NA non-coding upstream 147704 6285477 ~ 6298068 (-)
G29188 NA non-coding upstream 261866 6399639 ~ 6403721 (-)
G29385 NA non-coding upstream 489801 6627574 ~ 6627791 (-)
G29386 NA non-coding upstream 490203 6627976 ~ 6628269 (-)
CI01000004_05617072_05627369 NA other downstream 493772 5616644 ~ 5628289 (-)
G27746 NA other downstream 917562 5178227 ~ 5203724 (-)
G26788 NA other downstream 2845565 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 4346345 1772928 ~ 1774942 (-)
CI01000004_06539836_06541252 NA other upstream 397054 6538904 ~ 6541252 (-)
G29388 NA other upstream 493520 6631293 ~ 6631907 (-)
G29656 NA other upstream 1826591 7964364 ~ 7965500 (-)
G29746 NA other upstream 2216725 8354498 ~ 8358127 (-)
G30316 NA other upstream 3240164 9377937 ~ 9406921 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location