CI01000004_08414451_08436256


Basic Information

Item Value
gene id CI01000004_08414451_08436256
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8414316 ~ 8439933 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_08414451_08436256.mRNA
GTACAAAAGCACGAGCGATCCGCGAGACGAGATTTGCACGCGCTGCTGTAGGAGATCAGCGGACGGCTGTCTGAGATCTATTCAACAACATTTCTTTGTTTCTCCGTGTAATTCCGGTTTTCTTTCGTCTTTAATATGGCGAGCGATTCTCCGGCTCGGAGTCTGGATGAGATAGACCTCTCCTCGTTGAGGCCCTGCACTCTGCCCTTCACTGAAACCAGAAGCGGAGGTCTGTGTCCCACATACATGGGAGCGATGTTTGGCATCACCTGGTCAGCCTCACCTAGTCCTGAGGGACGACATCTGAAAATGAGCTTCTGTGCTCTGACCACAAACCTTGAAATGAGATCCATGCCCTTTCTGTTTGTTGCCTGGCCATTTTTAGCTCCGAACACAAATTTTTGTGAACTGAGTGATTCTTTGGAAATATCCAACAGTGAACTGAATGATTCATTGAATCAAACCTCACTATTTACTAATAGGATTTTAATGAATAACAGTGTTTGGATGTTGCAGAAGCGGCAGTTACAAGGGGAAAAACCTGAGAAAAGGGCCGTCCTGCCAGTCTTGTCAGACAAAGAACAGGCCCAGCATGAGATGACTGAGGACCCTGCAGGAATATTTGAGCTGGTGGAGCTAGTGGGCAATGGCACGTATGGTCAGGTGTACAAGGACATATTCTGGGGAGGAGTAGACAAGAACGACGAGAGGGCTACCGACAGACACACACGTTTCAGATTTGTGGAGCAAGTCGATCTGTGCTCAGACGGGGAAGTGAATCTCTTTCACTCTGCTTCTTTCTGGTCGCGTAGTGAGTCTCTTCCGCCTTCCAGTTTGCCCTTCATGTCTCAGACATGCAGAGCAGGCCTGAGTGAACAGAGTTGCTGGATTGTGACTGGAGTCTGTGCTTCAGTGAAGAGTGAAGATGGGCGTCTGGATTGTCCCACTCCCAGCCACAAGCTCTCAACTGGAAAGACACAGACGTGTCTGTGGGACTGGGTTTTTCCAGTAGTGATGATTTCATTATTGTGTCATGAACCAGACGCTCAGGCTCTTGTTTGCAGGAACTACAAAATCATATGCTGCTGACTGATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_08414451_08436256.mRNA False 1096 mRNA 0.48 9 8414316 8436263

Neighbor

gene id symbol gene type direction distance location
CI01000004_08382042_08402126 PLD1A coding upstream 11802 8380472 ~ 8402514 (+)
CI01000004_08302613_08354790 FNDC3BA coding upstream 59521 8302613 ~ 8354795 (+)
CI01000004_08252556_08257067 NA coding upstream 156223 8252394 ~ 8258093 (+)
CI01000004_08243282_08245264 NA coding upstream 168947 8242979 ~ 8245369 (+)
CI01000004_08200962_08208539 PPP2R3A coding upstream 203612 8199371 ~ 8210704 (+)
CI01000004_08458998_08503889 TNIK, TNIKA coding downstream 22735 8458998 ~ 8503992 (+)
CI01000004_08507941_08515797 SLC2A2 coding downstream 71678 8507941 ~ 8516308 (+)
CI01000004_08518587_08521540 EIF5A2, EIF5A.L, EIF5A coding downstream 82199 8518462 ~ 8521661 (+)
CI01000004_08573940_08586930 NA coding downstream 136478 8572741 ~ 8587170 (+)
CI01000004_08618566_08669147 NA coding downstream 182303 8618566 ~ 8669147 (+)
G28843 NA non-coding upstream 3096 8410726 ~ 8411220 (+)
G28835 NA non-coding upstream 45243 8368861 ~ 8369073 (+)
G28834 NA non-coding upstream 48395 8365695 ~ 8365921 (+)
G28819 NA non-coding upstream 130219 8277202 ~ 8284097 (+)
G28801 NA non-coding upstream 380604 8028250 ~ 8033712 (+)
G28848 NA non-coding downstream 34482 8470745 ~ 8471884 (+)
G28849 NA non-coding downstream 91182 8527445 ~ 8527675 (+)
G28855 NA non-coding downstream 117969 8554232 ~ 8554563 (+)
G28858 NA non-coding downstream 159589 8595852 ~ 8597783 (+)
G28861 NA non-coding downstream 166360 8602623 ~ 8602843 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 757933 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1839895 6570771 ~ 6572667 (+)
G28302 NA other upstream 1912229 6470028 ~ 6502087 (+)
G28165 NA other upstream 2681315 5732589 ~ 5733001 (+)
G27805 NA other upstream 3040513 5372825 ~ 5373803 (+)
G28859 NA other downstream 162972 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 540175 8976254 ~ 8980984 (+)
G30797 NA other downstream 2061113 10497376 ~ 10497788 (+)
G31710 NA other downstream 3200988 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 3228510 11666900 ~ 11667659 (+)

Expression


Co-expression Network