G31551 (LOC107709388,LOC107595343,LOC107712845,LOC107668482,LOC107553360)


Basic Information

Item Value
gene id G31551
gene name LOC107709388,LOC107595343,LOC107712845,LOC107668482,LOC107553360
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28372385 ~ 28375787 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46585
AgcatcttgatttttttttttttttttttttagggatcGTTCTGTACACGCATTCTCAAACTAAACGTGTCGAATCTAATCCAGAATGAACATACGGTCTTATTGACAAGGCATTTCAGCATCACTTTTTCAAACCGATAACCTTCCGATAATACTGTGCATTCCTAAAAGAAACTCATGCAAAAGCTAAAAGCTgtcaaaaacaagcccagaagGAGTGAGTGAAGAGGAAAGGTCGAGCGCAACGAGAAAGGAAATGAAGATCAAGCATGCTGGTCTCAGGAAGCTTTGAGCTCACTCGCAACGAACCAGCTTTGTTAAGGCCAAGAGATTTAATCTGCTGATGAATATTTCCAAGTTCAGGAATATCTGGGCATTGAAATATGCCAAGCTTGAGCACATGGATGGATTTAATCAAGCTCGTCAAGAACAGGcagacagaaatatatatatatatatataaagatcaatttaaatgttaaaatgaaccGTGAGCTTCAGCGAAGGCTGTTGTCTGTAACTGACCCTGACAaaactcagaaaacacaacCAGCTAGTGAAggcaaaacacatgcatatgaGAGAATAAAAGTCATGAAAGATGCtttggcattaaaaaatattacggGCTAAACACTAAATTTACAATGGGGTACAGAAGTCAGAGAGTACACTGAACATTTAGGACAGAATTTAAAAGCTTGGGGATTTtagaaagcaaaataaatgttacgaaattcaaataatatttcagattctGGATTACTTCCAGGTGAAATGCAACGCAGTGCATGAAGTGCAGAAACGTTTAGGTTTAGacagaattaaaaaacaacatggTCTCTAGGCTTTTGGACCCCATTGTACAAACATACCTTTTTATTGAAAGGTAAGTGGTTTAACAAAAAGACAAGcatcacatttctgtttttaaatgtccCGGCAAATGCATTACTGTACCCATCTTCGAGAAGTTGTATTTAACCcgtaacatttttttggaaattccttttattttttttttttttttttaggatgagTAAGTTGTGAGTGAAAACACGAGGCATGAGTCAGGTACTCTAACGTGTACGAGTGTTGAAGTGTGTGTCAGCAGGGGGCGCTCTCACCATGTGCTGGGTGCGGACGGCCTCCAGAGGATAGTCTCCTTTAGCCGTCTCTCCGCTCAGCATGATGCAGTCGGCTCCGTCCAGAACGGCGTTGGCCACGTCGCTGCCCTCGGCACGCGTGGGGCGAGGCTTCTTGATCATGCTCTCCAACATCTACAAAAAAAAGCCCTGCTGATTAATATTACACGAGAGCATATGACAGACCTGCTTGAAGTTGAGATGTATTTTCCGGAGAATGCATGCTAATGAGCGAGCCTGGAGCACAAGCGCAGTCATCGGTAGcacatttgaatatttgtattaatagaaaacaatacatcaaaatgatcaatttttcATGTAtgctaaaaatctttttttttttttttttttaagtaaagatcatgttccatggagatattttgtaaatttcctgccataaatgcataaagttAATTTTTGGTTAGTCATATGCATTACTGAGAACTTAAGtagttttgtattgtgtttgatATTCAGAAGTTGTATAAATCTTAGAAAttacgactggttttgtgaGCCAGTATCAGACATGGGGTTGTAGGCTAGCTGACCTGAGTGGCACAGATGATTGGCTTTCCTGCTTTGTTGCAGCGACCAATCATCATCTTCTGGGCCAGAAAGACCTTTTCTGTGGGGATTTCAATACCAAGGTCTCCTCGAGCGACCATGATGCCATCACTGGCCTCCATGATCTCATCAAACCTGGTCAATAAAAGGAGACGCATTCAAACCCAAGTCATTTTTACACATCTAACGGGAAGCGGGAGTCACCCCCTCACCTGCGCACGCCCTCGTGGTTCTCCAGCTTGCTGATGATCTTGATGTTCTTGCCCTTCTCTCCCAGCACTTTGCGCACCTCGTGCACATCAGCTGCCTTGCGGATGAAAGAGGCAAAGATCATGTCGACTCCCATCTGCACGCCGAACTGCAGGTCCTTGACGTCTTTCGCGGAGACGGCGGGCAGGTCGACCGCGGCACCCGGCAGATTGACACCCTTCTTACTACCCAGAGTTCCTCCGTTCTCAATTTCACACAGCAGATAGTCAGAACCTGAGGAAGAGACGTAATATTCATCCAGCAGAAAAAGATGATTCTGCACATAACACAGCGTCCACAGTAGAAGCGCT
>TU46586
AgcatcttgatttttttttttttttttttttagggatcGTTCTGTACACGCATTCTCAAACTAAACGTGTCGAATCTAATCCAGAATGAACATACGGTCTTATTGACAAGGCATTTCAGCATCACTTTTTCAAACCGATAACCTTCCGATAATACTGTGCATTCCTAAAAGAAACTCATGCAAAAGCTAAAAGCTgtcaaaaacaagcccagaagGAGTGAGTGAAGAGGAAAGGTCGAGCGCAACGAGAAAGGAAATGAAGATCAAGCATGCTGGTCTCAGGAAGCTTTGAGCTCACTCGCAACGAACCAGCTTTGTTAAGGCCAAGAGATTTAATCTGCTGATGAATATTTCCAAGTTCAGGAATATCTGGGCATTGAAATATGCCAAGCTTGAGCACATGGATGGATTTAATCAAGCTCGTCAAGAACAGGcagacagaaatatatatatatatatattttatatatatatatatatatatatataaaaagatcaatttaaatgttaaaatgaaccGTGAGCTTCAGCGAAGGCTGTTGTCTGTAACTGACCCTGACAaaactcagaaaacacaacCAGCTAGTGAAggcaaaacacatgcatatgaGAGAATAAAAGTCATGAAAGATGCtttggcattaaaaaatattacggGCTAAACACTAAATTTACAATGGGGTACAGAAGTCAGAGAGTACACTGAACATTTAGGACAGAATTTAAAAGCTTGGGGATTTtagaaagcaaaataaatgttacgaaattcaaataatatttcagattctGGATTACTTCCAGGTGAAATGCAACGCAGTGCATGAAGTGCAGAAACGTTTAGGTTTAGacagaattaaaaaacaacatggTCTCTAGGCTTTTGGACCCCATTGTACAAACATACCTTTTTATTGAAAGGTAAGTGGTTTAACAAAAAGACAAGcatcacatttctgtttttaaatgtccCGGCAAATGCATTACTGTACCCATCTTCGAGAAGTTGTATTTAACCcgtaacatttttttggaaattccttttattttttttttttttttttaggatgagTAAGTTGTGAGTGAAAACACGAGGCATGAGTCAGGTACTCTAACGTGTACGAGTGTTGAAGTGTGTGTCAGCAGGGGGCGCTCTCACCATGTGCTGGGTGCGGACGGCCTCCAGAGGATAGTCTCCTTTAGCCGTCTCTCCGCTCAGCATGATGCAGTCGGCTCCGTCCAGAACGGCGTTGGCCACGTCGCTGCCCTCGGCACGCGTGGGGCGAGGCTTCTTGATCATGCTCTCCAACATCTACAAAAAAAAGCCCTGCTGATTAATATTACACGAGAGCATATGACAGACCTGCTTGAAGTTGAGATGTATTTTCCGGAGAATGCATGCTAATGAGCGAGCCTGGAGCACAAGCGCAGTCATCGGTAGcacatttgaatatttgtattaatagaaaacaatacatcaaaatgatcaatttttcATGTAtgctaaaaatctttttttttttttttttttaagtaaagatcatgttccatggagatattttgtaaatttcctgccataaatgcataaagttAATTTTTGGTTAGTCATATGCATTACTGAGAACTTAAGtagttttgtattgtgtttgatATTCAGAAGTTGTATAAATCTTAGAAAttacgactggttttgtgaGCCAGTATCAGACATGGGGTTGTAGGCTAGCTGACCTGAGTGGCACAGATGATTGGCTTTCCTGCTTTGTTGCAGCGACCAATCATCATCTTCTGGGCCAGAAAGACCTTTTCTGTGGGGATTTCAATACCAAGGTCTCCTCGAGCGACCATGATGCCATCACTGGCCTCCATGATCTCATCAACCTGCGCACGCCCTCGTGGTTCTCCAGCTTGCTGATGATCTTGATGTTCTTGCCCTTCTCTCCCAGCACTTTGCGCACCTCGTGCACATCAGCTGCCTTGCGGATGAAAGAGGCAAAGATCATGTCGACTCCCATCTGCACGCCGAACTGCAGGTCCTTGACGTCTTTCGCGGAGACGGCGGGCAGGTCGACCGCGGCACCCGGCAGATTGACACCCTTCTTACTACCCAGAGTTCCTCCGTTCTCAATTTCACACAGCAGATAGTCAGAACCTGAGGAAGAGACGTAATATTCATCCAGCAGAAAAAGATGATTCTGCACATAACACAGCGTCCACAGTAGAAGCGCT
>TU46588
cagcctttgttaAATTTTGGATGCAACTAATCATTTCCCAGCACtatataatgacaataataataataatatcataaaacaAATGTACTAAATAAATCTGATGTAgttttataatctttttttaatctgattttaCACTGCGATTTGAAAATATAAAGGGAATTTTTAGGATGGACGTCCATAAGCATTCAGCATGTGtctctcatttctctctctctcttccagtcCTCTCCTGTCCCTGCTCTTCCTACTCTGACTGACGGATCTCTCCATCTGTACGCCGCCCGCCTACCTGCCGGACCCAGTGAGGACTATAAACGCGGAGGACAGGATTTTAAAGGAGGCCTCCACAGCGCCAATGGCGATGGCCTCGGCGGGGTCGGTGGAGGGCGGCAAACAGCGACGCAGGTCCTCAAACACCTGACGGTGGAACATGGCCGCCTCCGCCTCGCGAGCGATCTGATGCAGCCATGTGCTGGGTGCGGACGGCCTCCAGAGGATAGTCTCCTTTAGCCGTCTCTCCGCTCAGCATGATGCAGTCGGCTCCGTCCAGAACGGCGTTGGCCACGTCGCTGCCCTCGGCACGCGTGGGGCGAGGCTTCTTGATCATGCTCTCCAACATCTACAAAAAAAAGCCCTGCTGATTAATATTACACGAGAGCATATGACAGACCTGCTTGAAGTTGAGATGTATTTTCCGGAGAATGCATGCTAATGAGCGAGCCTGGAGCACAAGCGCAGTCATCGGTAGcacatttgaatatttgtattaatagaaaacaatacatcaaaatgatcaatttttcATGTAtgctaaaaatctttttttttttttttttttaagtaaagatcatgttccatggagatattttgtaaatttcctgccataaatgcataaagttAATTTTTGGTTAGTCATATGCATTACTGAGAACTTAAGtagttttgtattgtgtttgatATTCAGAAGTTGTATAAATCTTAGAAAttacgactggttttgtgaGCCAGTATCAGACATGGGGTTGTAGGCTAGCTGACCTGAGTGGCACAGATGATTGGCTTTCCTGCTTTGTTGCAGCGACCAATCATCATCTTCTGGGCCAGAAAGACCTTTTCTGTGGGGATTTCAATACCAAGGTCTCCTCGAGCGACCATGATGCCATCACTGGCCTCCATGATCTCATCAAACCTGGTCAATAAAAGGAGACGCATTCAAACCCAAGTCATTTTTACACATCTAACGGGAAGCGGGAGTCACCCCCTCACCTGCGCACGCCCTCGTGGTTCTCCAGCTTGCTGATGATCTTGATGTTCTTGCCCTTCTCTCCCAGCACTTTGCGCACCTCGTGCACATCAGCTGCCTTGCGGATGAAAGAGGCAAAGATCATGTCGACTCCCATCTGCACGCCGAACTGCAGGTCCTTGACGTCTTTCGCGGAGACGGCGGGCAGGTCGACCGCGGCACCCGGCAGATTGACACCCTTCTTACTACCCAGAGTTCCTCCGTTCTCAATTTCACACAGCAGATAGTCAGAACCTGAGGAAGAGACGTAATATTCATCCAGCAGAAAAAGATGATTCTGCACATAACACAGCGTCCACAGTAGAAGCGCT

Function

NR:

description
PREDICTED: pyruvate kinase PKM-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46585 True 2275 lncRNA 0.42 2 28373484 28375787
TU46586 False 2226 lncRNA 0.41 2 28373484 28375787
TU46588 False 1617 lncRNA 0.47 2 28372385 28375787

Neighbor

gene id symbol gene type direction distance location
dhdh.2 zgc:101723,LOC107665090,LOC107712874 coding upstream 4907 28360946 ~ 28367478 (+)
dhdh.1 LOC107665437,LOC107668471,LOC107709394,LOC107553352 coding upstream 12143 28354430 ~ 28360242 (+)
LOC122342376 LOC107694127,LOC107717944,LOC107590657,LOC107752637,LOC107552269 coding upstream 171374 28197236 ~ 28201011 (+)
LOC122342444 krt1-19d,LOC107665143,LOC107666326,LOC107753925,LOC107563035 coding upstream 262338 28106617 ~ 28110047 (+)
krt91 krt91,cki,LOC107727715,LOC107563033,LOC107753907,LOC107666324,LOC107549866,LOC107753917 coding upstream 289415 28080859 ~ 28082970 (+)
LOC122343436 parp6,LOC107668484,LOC107665100,LOC106587213 coding downstream 11720 28387507 ~ 28410310 (+)
celf6 celf6,LOC106535005 coding downstream 45462 28421249 ~ 28537332 (+)
LOC122342381 LOC107665446,LOC107595396,LOC107713214,LOC107553351,LOC107753194,LOC107676404 coding downstream 218090 28593877 ~ 28594995 (+)
LOC122342385 LOC107749047,LOC107728228,LOC107574018,LOC107722090,LOC107685875,LOC107553362,LOC107569032,LOC107669894 coding downstream 594464 28970251 ~ 28993117 (+)
G31631 myo7aa,LOC107660700,LOC106612882,LOC106581013 non-coding upstream 101801 28270102 ~ 28270584 (+)
G31621 NA non-coding upstream 144084 28226400 ~ 28228301 (+)
G31603 NA non-coding upstream 210120 28144440 ~ 28162265 (+)
G31596 NA non-coding upstream 251226 28120252 ~ 28121159 (+)
G31548 NA non-coding upstream 304595 27960947 ~ 28067790 (+)
LOC122342705 NA non-coding downstream 4825 28380612 ~ 28385954 (+)
G31653 NA non-coding downstream 145197 28520984 ~ 28541933 (+)
LOC122342517 NA non-coding downstream 192498 28568285 ~ 28593867 (+)
G31665 NA non-coding downstream 271190 28646977 ~ 28652833 (+)
LOC122343449 NA non-coding downstream 480344 28856131 ~ 28858515 (+)
G31649 NA other upstream 19159 28350353 ~ 28353226 (+)
G31636 NA other upstream 51691 28285027 ~ 28320694 (+)
LOC122342379 myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840 other upstream 54803 28297302 ~ 28317582 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other upstream 150968 28218733 ~ 28221417 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other upstream 156137 28206958 ~ 28216248 (+)
LOC122343276 LOC107561645,LOC107679413,LOC107569100,LOC107747810,LOC107734660,LOC107655025 other downstream 454848 28830635 ~ 28893627 (+)
LOC122342386 LOC107670352,LOC107565530,LOC107659779,LOC107747635,LOC107566978,LOC107561645,LOC107665206,LOC108183462,LOC107749046,LOC107574515,LOC107671223,LOC107663329,LOC107575399,LOC107576964,LOC107571858,LOC107575109,LOC107698614 other downstream 629978 29005765 ~ 29185529 (+)

Expression


Co-expression Network