LOC122342339


Basic Information

Item Value
gene id LOC122342339
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24319640 ~ 24322138 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236127.1
ATGGTCGCGAAGAACCGAAACAAGAGCGGCTCGCAGCCGAGCAGCGGCGACAGAGCACCGGCGAGCGCGCAGCCCGACGACGCGCCGAAGAACCGGAGCCCGAGAGCGGCGCGCGCGGACGGCGGCGCGTCGGGCTCGCTCGTGAAGCTCGTGTCCGCGCTGTCCTACCTGGGCTTCGTGGCCGGGACCGTGATCGCGTCCGTGAGCTTCTACCAGGAGCTGTCAAACATCAAACAGACGAGCTCCCGGCACGAGGAGTCCGTCCAGAAAGTGCGCGGACGCGGCCGACGCGCTGCAACAGTGGTGCGGGACGATGTGGTggtctctgattggctgacgggGCTCTCAAGTTTACAGTGTGAGTCTCAAATTCACTGTATTCAGACCTCGATAGGTTCAGATGCAGAAAGCAGCATAGACACTGTGACACGAGAAGCGCTGACCGAAGTGTCCTCACAGAGCAGACCTGAGAGGTTTGGCTTCTTACTCTTCTTCTGTCTTGCTGAAGATCAGCTCTGCTGTGGCCTGCAGCCGATCGGAGGCGAGATCCGGTCCATGCAGGCGTCTCTGGAGGCTCTGGAGAGCACGGTGCTCAGCGTCAGGACTGATCTGGAGCGCACTGGCCGAGCCGTGCAGACGGGAGAAGACAACACCCGGCGGCTGGAGAACGCGCTCCAGAAGCTCCAGAGCGATGTCTCCCAGGAGCTGAGGCAGGCTGTCCAGGAGGTGAAGGCGACGCGGGAGCAGGATGCCTCGTCCCTGGAGGAGCGCCTGTCCCAGCTGAGCCGCTCCACGGCTGAGGCCTCGGTGCAGCAGAGCCGCTTCCAGAGCGAACTACAGGAGCTCAGGGCCCGTGTGGAGAAGCAGGACGCCCCGGCAGACCTCCGGCAAGAGCTGACGGCCCtcggcagcaccgtggagcgtCTGAGCACCGCCAGCGAGGTGTCCGAGGGGAACACGGCCGTGCTGCGTGAGCACATCGCAGCAGTCAGCGCCGAGCTGCAGACCAGGAACAAGGAGGTGGCGTCTGTGTCCGAGGGCGTGGAGGCTGTGAGGCGCTGCTGCAGAGCGCCGTCGGGGCCTCGGGGCGAGGTGTCCACGGCCAGAGCCAGTGCTCAGAGCGCCTCCGACCACATCCAGAGCCTCGCCGACCGGCTGGAGATGAGCACCACCGCCCTGCAGAGCCTAGAGACCCAGACCCGAGAACAGCTGAGCCAGCTGGACAAACACAGAGAGGACGCCGAGGTCCGGCTGAAGAGTGTGGAGGAGAGCCAGGAGGCCGCTGTGTCCTCGCTCACGGAGCAGACCAACAGACTGAACGCTCTCGAGGCCGAGCAGCAATCTCTCCGGCGCTCACTGGACGACCACAAGACCAGTGCAGAGAAACAGAGCCGGGCGCTGAGAGACGGTCTGGAGGAGCTGCAGGCCAGAGCTTCTGAGGCCCAGGAGCTAGAGAGAAACCTGAACGTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236127.1 True 1473 mRNA 0.64 3 24319640 24322138

Neighbor

gene id symbol gene type direction distance location
LOC122343118 LOC107677819,LOC107725800 coding upstream 6893 24309427 ~ 24312747 (+)
LOC122342333 NA coding upstream 60124 24252667 ~ 24259516 (+)
LOC122343090 NA coding upstream 67112 24244775 ~ 24252528 (+)
LOC122342332 NA coding upstream 75015 24232366 ~ 24244625 (+)
LOC122342331 NA coding upstream 93811 24222077 ~ 24225829 (+)
LOC122342343 NA coding downstream 92320 24414458 ~ 24415226 (+)
LOC122343053 NA coding downstream 105370 24427508 ~ 24433826 (+)
ttll1 ttll1,LOC102779306 coding downstream 126883 24449021 ~ 24453208 (+)
LOC122343091 NA coding downstream 149869 24472007 ~ 24476783 (+)
terfa NA coding downstream 158104 24480242 ~ 24485353 (+)
G30819 NA non-coding upstream 5352 24310339 ~ 24314288 (+)
G30743 LOC107685875,LOC107728228,LOC107569032,LOC107749047,LOC107574018,LOC107576424,LOC107705465,LOC107564371,LOC107671223,LOC107570416 non-coding upstream 108160 23787750 ~ 24211480 (+)
G30723 NA non-coding upstream 116968 23769174 ~ 24202672 (+)
G30748 NA non-coding upstream 288899 23907305 ~ 24030741 (+)
G30754 NA non-coding upstream 309749 24003642 ~ 24009891 (+)
LOC122343172 NA non-coding downstream 95705 24417843 ~ 24419568 (+)
G30812 NA non-coding downstream 133884 24456022 ~ 24486887 (+)
G30877 NA non-coding downstream 392559 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 666729 24988867 ~ 24989274 (+)
G31226 NA non-coding downstream 992085 25314223 ~ 25314596 (+)
LOC122342990 NA other upstream 178194 24133050 ~ 24141446 (+)
LOC122342976 usp15,LOC107685889 other upstream 188153 24117289 ~ 24131487 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 1151633 23163695 ~ 23168007 (+)
G30632 NA other upstream 1159884 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 1189451 23129106 ~ 23130189 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 132132 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 143316 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 314214 24636352 ~ 24638654 (+)
LOC122343125 NA other downstream 316951 24639089 ~ 24646601 (+)
LOC122343086 NA other downstream 350753 24672891 ~ 24674412 (+)

Expression


Co-expression Network