terfa


Basic Information

Item Value
gene id terfa
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24480242 ~ 24485353 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237313.1
ATACAAATACTAAAACATGTTTAGTACCCCGACTGTGCTTTTATGTCTATGACAATTGactaaatgttcaaaataaaagtttcggACAAAATGAGTAACTACACCGAAACCTAGCACCGAGTATATGAGtatagctgtttttaatttatttatttcgtttttttaatacttGCTTGGGAAACACAACcgtgagagagaaaaacacgaAAAACgaatcaatcaatcgatcaaATAATAAACGCGACACTTTTTTCTGCCGTTATGATTCGTAAACAGTCGTGATGACGTCGCTGGCGCTCGCGCCACTGTCGGCCAATCAGAGGCGCCGGCCCCGCCCCTCCGCTTCAGTCCGCGCGCGGTAAACCGGGCAGAATGAGCGCGTCCGCGACCGACGCGATGTTCCTGAGCGACGAGCAGGTCGTGAACCGCTGGGGCTTCGACTACTACGTGTTCAAGGCCCTCGGCGCCTTCAGGGACGGAGACTACACGGCCTTCGAGCACTTCACGCGGGTCGTCGAGAGTCTGGTGCTCAGGCCCGTGGACGGACGCGGCGACATGATCGTCAAGCTGCGCTTCATGCAGTTCCTGTCCCGGATCAACAACGGAGACAGGCTCGACCTGATGTTCGAGGAGCCCCAGACCCCTCTGGAGTCGGCCCTCAGCGTCCTGGAGACCATCTGCAGGGACATGAGCGTCCCCCAGAGACAGCAGGAGCAGGTGCGGCACGCCATCGTCGAGacgCTGGTCGTGGTGTGTATCCGCAGCGGAGAGTTTGAGAAAGCTGAGGAGCTGCTGCTGAGACTCTTCAGTGACTCCAACGATTCAGCAGGAAGAaggaAGCTGCTGATGAATCTGATTCGTCGTCGTCGTTCTTCTCACTCGGTTCTTCAGCTCAGCTCGTTCAGTGACTTCAAGCAGGACATGCTGGACTTCCTTGAGCAGCTGTACCGTGTCCCGGAGCCCTTCCTGCTGCAGatgctGAAGCGCTCCGGACACCGCGGGCAGACGTCTCAGAGCGTGACCTCACCGCAGGATGAGCGGACGAGCAGCGCAGCCGCCGAGGATCATGGggGTGTGTGTGCGGCTCGTCTCAGTCTGCGGGCGCTGCAGCGGGTGTACGGCGTGCTCCGAGAGCGCTACGCTGTGAGCGTCTCCTTCACGCAGCTGCAGCGGGAGCTGGAGGACGAGAGCCAGGAGCCCGAGGGGCCCCACGCCGGCATGACCATCTCCCGCCTCGTGCAGGAGGACGACAGCCAGCTcagcgaggaggaggaggagcagacGGTGTGTGAGCTCTGCTCtgacgagtgtgtgtgtttcagtcagGGCAGACGCAGACAGAAGAGGATGGTCCTGTCCAGTGAAGAGGAGTCTGAGGAGTCCAgcagacacagacagaagaagaagaagagcgaTCACAGGAGTGTGTCCAGTGAGTCTGATGATCTCAGCTCGTCTCCAGCTTCACAGACACACCACCGACACAGCTCTCCGTCCGGAGGAACTCACAGCaggaaggccCGGTGGGAGGAAGTGTCCGGGATGCAGGAGAACTGGAGCGATGAGGAGTCACTGTTCGGTTCCTCTTCAGgccgCTCCAGCAGGAAGTGCAGCAGgaagatgtgGACGCTGCAGGAGTCTGAGTGGCTGAAGGAGGGTGTGCAGCGTTACGGAGTGGGACACTGGGAGAAGATCCGCTCGTCCTTCCCCTTCAGCGGACGCACGGCGGTCAACCTGAAGGACCGCTGGAGGACCATGCTGAAGCTCAGGCtggtctgacacacacacacacacacacacacacacacacacacacacacacacacacacgttttatcatgtttttaggCCTTGTGTTCCTCATTAAACACtggttcattcattcattccctGAAAGTGTGTTCTTGATGTTCACGAGGGAGCTCCTGTTAGGTGCTTCTCTCAAACAGACCTTTAAAAGGATGTGAGTTAATGCCAGGAGTTGtctttggtcaaataaatgaactgaacAGAA

Function

NR:

description
PREDICTED: telomeric repeat-binding factor 2-like

GO:

id name namespace
GO:0000723 telomere maintenance biological_process
GO:0000783 nuclear telomere cap complex cellular_component
GO:0042162 telomeric DNA binding molecular_function

KEGG:

id description
K11111 TERF2, TRF2; telomeric repeat-binding factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237313.1 True 2014 mRNA 0.56 12 24480242 24485353

Neighbor

gene id symbol gene type direction distance location
LOC122343091 NA coding upstream 3459 24472007 ~ 24476783 (+)
ttll1 ttll1,LOC102779306 coding upstream 27034 24449021 ~ 24453208 (+)
LOC122343053 NA coding upstream 46416 24427508 ~ 24433826 (+)
LOC122342343 NA coding upstream 65016 24414458 ~ 24415226 (+)
LOC122342339 NA coding upstream 158104 24319640 ~ 24322138 (+)
cct2 cct2 coding downstream 7724 24493077 ~ 24497580 (+)
LOC122343045 nots,LOC107677818,LOC107569115,LOC107725781 coding downstream 13254 24498607 ~ 24502130 (+)
LOC122343032 NA coding downstream 83641 24568994 ~ 24574432 (+)
LOC122343010 NA coding downstream 91810 24577163 ~ 24581794 (+)
LOC122342982 NA coding downstream 110500 24595853 ~ 24605817 (+)
LOC122343172 NA non-coding upstream 60674 24417843 ~ 24419568 (+)
G30819 NA non-coding upstream 165954 24310339 ~ 24314288 (+)
G30754 NA non-coding upstream 470351 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 478678 23978432 ~ 24001564 (+)
LOC122343177 NA non-coding upstream 503722 23967713 ~ 23976520 (+)
G30877 NA non-coding downstream 229344 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 503514 24988867 ~ 24989274 (+)
G31226 NA non-coding downstream 828870 25314223 ~ 25314596 (+)
G31228 NA non-coding downstream 829826 25315179 ~ 25315553 (+)
G31380 NA non-coding downstream 1302027 25787380 ~ 25787901 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other upstream 8792 24465454 ~ 24471450 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other upstream 13842 24454270 ~ 24466400 (+)
LOC122342990 NA other upstream 338796 24133050 ~ 24141446 (+)
LOC122342976 usp15,LOC107685889 other upstream 348755 24117289 ~ 24131487 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 1312235 23163695 ~ 23168007 (+)
LOC122343159 NA other downstream 150999 24636352 ~ 24638654 (+)
LOC122343125 NA other downstream 153736 24639089 ~ 24646601 (+)
LOC122343086 NA other downstream 187538 24672891 ~ 24674412 (+)
G30882 NA other downstream 236071 24721424 ~ 24728447 (+)
LOC122342408 NA other downstream 258495 24743848 ~ 24767552 (+)

Expression


Co-expression Network