LOC122343177


Basic Information

Item Value
gene id LOC122343177
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23967713 ~ 23976520 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250697.1
TATACACCTTGTACTTTACGTGTAACGTTTACACCTGATCGTTTTTTCTGATCGAAAAACCTTACCATTAACCTAAttctgatttttaatgtttatgcggggacatacatgaacataaagagaaaacaaagacattttgagaagttgtctagaaactgaacgttttgatcaaagcaaatcttcagctgtggagcagaaagacacttccttattcatAGTCAGTGCTGAAGATCAAACTGTTCAGATCCatcatgaatgaaacacaaacatctggAGATGAAGAGTATTCTCCAGCCTGCAGctcagttcatcagaagagatcagaagcagtgcccagctgtgtgtctatgaagagtgACTGGTCTATGGATCGGCTACCAGAGTTTAAGAGTGAAGATTCCCAGCCTGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250697.1 True 411 lncRNA 0.40 3 23967713 23976520

Neighbor

gene id symbol gene type direction distance location
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding upstream 352783 23613478 ~ 23614930 (+)
LOC122343152 NA coding upstream 591842 23351927 ~ 23375871 (+)
LOC122343131 NA coding upstream 737981 23226211 ~ 23229732 (+)
LOC122343008 LOC107575457 coding upstream 784167 23168155 ~ 23183546 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 1219093 22739960 ~ 22748620 (+)
LOC122343046 NA coding downstream 108439 24084959 ~ 24091352 (+)
kdm5a kdm5a,LOC107710764 coding downstream 117360 24093880 ~ 24112912 (+)
LOC122343029 LOC107717679,LOC107693607,LOC107575410 coding downstream 168212 24144732 ~ 24149459 (+)
LOC122343033 NA coding downstream 176236 24152756 ~ 24156499 (+)
LOC122342331 NA coding downstream 245557 24222077 ~ 24225829 (+)
G30746 NA non-coding upstream 138129 23801556 ~ 23829584 (+)
G30732 NA non-coding upstream 180151 23721061 ~ 23787562 (+)
G30724 NA non-coding upstream 197008 23744325 ~ 23770705 (+)
G30688 NA non-coding upstream 206218 23456275 ~ 23761495 (+)
G30676 NA non-coding upstream 548204 23416682 ~ 23419509 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding downstream 1912 23978432 ~ 24001564 (+)
G30754 NA non-coding downstream 27122 24003642 ~ 24009891 (+)
G30819 NA non-coding downstream 333819 24310339 ~ 24314288 (+)
LOC122343172 NA non-coding downstream 441323 24417843 ~ 24419568 (+)
G30812 NA non-coding downstream 479502 24456022 ~ 24486887 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 799706 23163695 ~ 23168007 (+)
G30632 NA other upstream 807957 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 837524 23129106 ~ 23130189 (+)
LOC122342317 NA other upstream 1187574 22777983 ~ 22780139 (+)
LOC122343019 LOC107705900 other upstream 1285001 22661826 ~ 22682712 (+)
LOC122342976 usp15,LOC107685889 other downstream 140769 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 156530 24133050 ~ 24141446 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 477750 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 488934 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 659832 24636352 ~ 24638654 (+)

Expression


Co-expression Network