LOC122343033


Basic Information

Item Value
gene id LOC122343033
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24152756 ~ 24156499 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237322.1
CAAACCTGTGACTCCTATGAAGGAGTTTATTTCTGATCACAGAGAAACAGACCTGAGAGTACTGCTTTGGTTCACACACGATGTTGATGGAGTCTACCCGATGCCACTGAAAGAGGAGAATCTGAATGATGTGGAGCACAAAAATCAGCATAAGAAGAATCATGACTTCATTAAAGGGGAGAAATCTTCTAGTTACTCACAGACTCATAAAACAGAATCCACAAACCTTAAAGTCCAGATGAGCGTTCACACTGAAGAGAGATCTTTCACCTGTGAACaatgtggaaaaagtttcaGTCGAAAACAAGGCCTTAGAATACACTCAAAACTCCACACCGGAGAAAAGCCTTTCTCCTGCAAACAGTGTGGAAGAAGTTTCCCACGAAAAGGAAATCTTAAACttcacatgagagttcacactggagagaaaccgtaCTCCTGCCAGCAGTGTGGGAAGAGCTTCCCAAGAAAAGGAAACCTGACGGTTCACATGAGAGTCCActccggagagaagccttacccCTGCCAGCAGTGTGGGAAGAGCTTCTCAATAAAAGGAAATCTAAAAATTCACATGCtgattcacaccggagagaagcccttcaCATGCTCTCAGTGTGGGAAGAGCTTCTCCGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCAtctgctctcagtgcggaatgagatttaaacagaaaaaaactcttAATTCCCACATGAAAAATCACAGTGAAGAAAAACCTTTCATCTGCAAACTGTGTGGGAAGAGCTACAAAATGAAAGGAAACCTTAATGttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCGTTAATAATCACATGAGGATTCACTCTGGAGAGGACTGTTTCCTTTGTCTTCTGTGTGGAATGAATTTCCCAGACAGAAGTCACCTCGAGAATCATGTAAAAATCCACACCGGAGTGAAACTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCTCTTAAAGGACGCCTTGAGACTCACATGAAACTTCACTCTGGAGAAAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCACGTATCACTCAGACATGAAAAGACATTTGCGGACTCATTTTGGAGAgaaattgctgttattttaattgtggAAACTTCAACAGTTGTTGTTGCATTTATTCTGGAAAAAGACAATAAAGTGGTTCAgtctaataaaaacaaatggaaaGTCATGTAAACGTGACACCATCTTtatgttctttaaaaagagTTAAGTATACTTTCCATGTAAGACCTTTTCTAGTTTTGCAAACCATTACatctattaataaaacattttcctaaTTCTG
>XM_043237323.1
CGCATCTACGAATGTGTCGAAGAAAGCttcattaaaaagagaaataaagAATGAGATCTACGAGACACTGTAATAAAGATggagtttattaaagaggagagagaagatgTGAAGATTGAAGACACCgaggaacaaacagACCCGATGCCACTGAAAGAGGAGAATCTGAATGATGTGGAGCACAAAAATCAGCATAAGAAGAATCATGACTTCATTAAAGGGGAGAAATCTTCTAGTTACTCACAGACTCATAAAACAGAATCCACAAACCTTAAAGTCCAGATGAGCGTTCACACTGAAGAGAGATCTTTCACCTGTGAACaatgtggaaaaagtttcaGTCGAAAACAAGGCCTTAGAATACACTCAAAACTCCACACCGGAGAAAAGCCTTTCTCCTGCAAACAGTGTGGAAGAAGTTTCCCACGAAAAGGAAATCTTAAACttcacatgagagttcacactggagagaaaccgtaCTCCTGCCAGCAGTGTGGGAAGAGCTTCCCAAGAAAAGGAAACCTGACGGTTCACATGAGAGTCCActccggagagaagccttacccCTGCCAGCAGTGTGGGAAGAGCTTCTCAATAAAAGGAAATCTAAAAATTCACATGCtgattcacaccggagagaagcccttcaCATGCTCTCAGTGTGGGAAGAGCTTCTCCGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCAtctgctctcagtgcggaatgagatttaaacagaaaaaaactcttAATTCCCACATGAAAAATCACAGTGAAGAAAAACCTTTCATCTGCAAACTGTGTGGGAAGAGCTACAAAATGAAAGGAAACCTTAATGttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCGTTAATAATCACATGAGGATTCACTCTGGAGAGGACTGTTTCCTTTGTCTTCTGTGTGGAATGAATTTCCCAGACAGAAGTCACCTCGAGAATCATGTAAAAATCCACACCGGAGTGAAACTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCTCTTAAAGGACGCCTTGAGACTCACATGAAACTTCACTCTGGAGAAAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCACGTATCACTCAGACATGAAAAGACATTTGCGGACTCATTTTGGAGAgaaattgctgttattttaattgtggAAACTTCAACAGTTGTTGTTGCATTTATTCTGGAAAAAGACAATAAAGTGGTTCAgtctaataaaaacaaatggaaaGTCATGTAAACGTGACACCATCTTtatgttctttaaaaagagTTAAGTATACTTTCCATGTAAGACCTTTTCTAGTTTTGCAAACCATTACatctattaataaaacattttcctaaTTCTG
>XM_043237325.1
GAAAGATCAGCACAAACCTGTGACTCCTATGAAGGAGTTTATTTCTGATCACAGAGAAACAGACCTGAGAGTACTGCTTTGGTTCACACACGATGTTGATGGAGTCTGTGAGTGTTTCTGCTGGTTTTCCTGGTGCAGACCCGATGCCACTGAAAGAGGAGAATCTGAATGATGTGGAGCACAAAAATCAGCATAAGAAGAATCATGACTTCATTAAAGGGGAGAAATCTTCTAGTTACTCACAGACTCATAAAACAGAATCCACAAACCTTAAAGTCCAGATGAGCGTTCACACTGAAGAGAGATCTTTCACCTGTGAACaatgtggaaaaagtttcaGTCGAAAACAAGGCCTTAGAATACACTCAAAACTCCACACCGGAGAAAAGCCTTTCTCCTGCAAACAGTGTGGAAGAAGTTTCCCACGAAAAGGAAATCTTAAACttcacatgagagttcacactggagagaaaccgtaCTCCTGCCAGCAGTGTGGGAAGAGCTTCCCAAGAAAAGGAAACCTGACGGTTCACATGAGAGTCCActccggagagaagccttacccCTGCCAGCAGTGTGGGAAGAGCTTCTCAATAAAAGGAAATCTAAAAATTCACATGCtgattcacaccggagagaagcccttcaCATGCTCTCAGTGTGGGAAGAGCTTCTCCGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCAtctgctctcagtgcggaatgagatttaaacagaaaaaaactcttAATTCCCACATGAAAAATCACAGTGAAGAAAAACCTTTCATCTGCAAACTGTGTGGGAAGAGCTACAAAATGAAAGGAAACCTTAATGttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCGTTAATAATCACATGAGGATTCACTCTGGAGAGGACTGTTTCCTTTGTCTTCTGTGTGGAATGAATTTCCCAGACAGAAGTCACCTCGAGAATCATGTAAAAATCCACACCGGAGTGAAACTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCTCTTAAAGGACGCCTTGAGACTCACATGAAACTTCACTCTGGAGAAAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCACGTATCACTCAGACATGAAAAGACATTTGCGGACTCATTTTGGAGAgaaattgctgttattttaattgtggAAACTTCAACAGTTGTTGTTGCATTTATTCTGGAAAAAGACAATAAAGTGGTTCAgtctaataaaaacaaatggaaaGTCATGTAAACGTGACACCATCTTtatgttctttaaaaagagTTAAGTATACTTTCCATGTAAGACCTTTTCTAGTTTTGCAAACCATTACatctattaataaaacattttcctaaTTCTG
>XM_043237326.1
TTTGAGGTGTTGGTGTCTCATATCTGTCACTGCAGTCAGACTTAGGCTTCGGTGAGCTCTCTCTTACCAGTTGAAGGGATAGATGTTAACCTGGGCGACGATCTCTCCGGTGGAGATGTTTTGCACTGAACAGTCAAACTACTGAACTTCTGAAACCTTCTTGGTTAAGTCAAATGATCCCAAAAGAAGCTGTTGCAGAGACCGTGTGGAGACTGAATTCTGTTGATGGTGTAGGAAGGACCCCTTCATAGTCAGGTGCATGAGTCTGAGACCCGATGCCACTGAAAGAGGAGAATCTGAATGATGTGGAGCACAAAAATCAGCATAAGAAGAATCATGACTTCATTAAAGGGGAGAAATCTTCTAGTTACTCACAGACTCATAAAACAGAATCCACAAACCTTAAAGTCCAGATGAGCGTTCACACTGAAGAGAGATCTTTCACCTGTGAACaatgtggaaaaagtttcaGTCGAAAACAAGGCCTTAGAATACACTCAAAACTCCACACCGGAGAAAAGCCTTTCTCCTGCAAACAGTGTGGAAGAAGTTTCCCACGAAAAGGAAATCTTAAACttcacatgagagttcacactggagagaaaccgtaCTCCTGCCAGCAGTGTGGGAAGAGCTTCCCAAGAAAAGGAAACCTGACGGTTCACATGAGAGTCCActccggagagaagccttacccCTGCCAGCAGTGTGGGAAGAGCTTCTCAATAAAAGGAAATCTAAAAATTCACATGCtgattcacaccggagagaagcccttcaCATGCTCTCAGTGTGGGAAGAGCTTCTCCGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCAtctgctctcagtgcggaatgagatttaaacagaaaaaaactcttAATTCCCACATGAAAAATCACAGTGAAGAAAAACCTTTCATCTGCAAACTGTGTGGGAAGAGCTACAAAATGAAAGGAAACCTTAATGttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCGTTAATAATCACATGAGGATTCACTCTGGAGAGGACTGTTTCCTTTGTCTTCTGTGTGGAATGAATTTCCCAGACAGAAGTCACCTCGAGAATCATGTAAAAATCCACACCGGAGTGAAACTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCTCTTAAAGGACGCCTTGAGACTCACATGAAACTTCACTCTGGAGAAAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCACGTATCACTCAGACATGAAAAGACATTTGCGGACTCATTTTGGAGAgaaattgctgttattttaattgtggAAACTTCAACAGTTGTTGTTGCATTTATTCTGGAAAAAGACAATAAAGTGGTTCAgtctaataaaaacaaatggaaaGTCATGTAAACGTGACACCATCTTtatgttctttaaaaagagTTAAGTATACTTTCCATGTAAGACCTTTTCTAGTTTTGCAAACCATTACatctattaataaaacattttcctaaTTCTG
>XM_043237327.1
TTTGAGGTGTTGGTGTCTCATATCTGTCACTGCAGTCAGACTTAGGCTTCGGTGAGCTCTCTCTTACCAGTTGAAGGGATAGATGTTAACCTGGGCGACGATCTCTCCGGTGGAGATGTTTTGCACTGAACAGTCAAACTACTGAACTTCTGAAACCTTCTTGGTTAAGTCAAATGATCCCAAAAGAAGCTGTTGCAGAGACCGTGTGGAGACTGAATTCTGTTGATGGTGTAGGAAGGACCCCTTCATAGTCAGACCCGATGCCACTGAAAGAGGAGAATCTGAATGATGTGGAGCACAAAAATCAGCATAAGAAGAATCATGACTTCATTAAAGGGGAGAAATCTTCTAGTTACTCACAGACTCATAAAACAGAATCCACAAACCTTAAAGTCCAGATGAGCGTTCACACTGAAGAGAGATCTTTCACCTGTGAACaatgtggaaaaagtttcaGTCGAAAACAAGGCCTTAGAATACACTCAAAACTCCACACCGGAGAAAAGCCTTTCTCCTGCAAACAGTGTGGAAGAAGTTTCCCACGAAAAGGAAATCTTAAACttcacatgagagttcacactggagagaaaccgtaCTCCTGCCAGCAGTGTGGGAAGAGCTTCCCAAGAAAAGGAAACCTGACGGTTCACATGAGAGTCCActccggagagaagccttacccCTGCCAGCAGTGTGGGAAGAGCTTCTCAATAAAAGGAAATCTAAAAATTCACATGCtgattcacaccggagagaagcccttcaCATGCTCTCAGTGTGGGAAGAGCTTCTCCGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCAtctgctctcagtgcggaatgagatttaaacagaaaaaaactcttAATTCCCACATGAAAAATCACAGTGAAGAAAAACCTTTCATCTGCAAACTGTGTGGGAAGAGCTACAAAATGAAAGGAAACCTTAATGttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCGTTAATAATCACATGAGGATTCACTCTGGAGAGGACTGTTTCCTTTGTCTTCTGTGTGGAATGAATTTCCCAGACAGAAGTCACCTCGAGAATCATGTAAAAATCCACACCGGAGTGAAACTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCTCTTAAAGGACGCCTTGAGACTCACATGAAACTTCACTCTGGAGAAAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCACGTATCACTCAGACATGAAAAGACATTTGCGGACTCATTTTGGAGAgaaattgctgttattttaattgtggAAACTTCAACAGTTGTTGTTGCATTTATTCTGGAAAAAGACAATAAAGTGGTTCAgtctaataaaaacaaatggaaaGTCATGTAAACGTGACACCATCTTtatgttctttaaaaagagTTAAGTATACTTTCCATGTAAGACCTTTTCTAGTTTTGCAAACCATTACatctattaataaaacattttcctaaTTCTG

Function

GO: NA

KEGG:

id description
ko00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ko03022 Basal transcription factors

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237322.1 False 1573 mRNA 0.42 2 24153810 24156499
XM_043237323.1 False 1617 mRNA 0.41 3 24152756 24156499
XM_043237325.1 False 1616 mRNA 0.42 2 24153798 24156499
XM_043237326.1 True 1748 mRNA 0.42 2 24153945 24156499
XM_043237327.1 False 1733 mRNA 0.42 2 24153945 24156499

Neighbor

gene id symbol gene type direction distance location
LOC122343029 LOC107717679,LOC107693607,LOC107575410 coding upstream 3297 24144732 ~ 24149459 (+)
LOC122342945 LOC107563545 coding upstream 8185 23633798 ~ 24144571 (+)
kdm5a kdm5a,LOC107710764 coding upstream 39844 24093880 ~ 24112912 (+)
LOC122343046 NA coding upstream 61404 24084959 ~ 24091352 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding upstream 537826 23613478 ~ 23614930 (+)
LOC122342331 NA coding downstream 65578 24222077 ~ 24225829 (+)
LOC122342332 NA coding downstream 75867 24232366 ~ 24244625 (+)
LOC122343090 NA coding downstream 88276 24244775 ~ 24252528 (+)
LOC122342333 NA coding downstream 96168 24252667 ~ 24259516 (+)
LOC122343118 LOC107677819,LOC107725800 coding downstream 152928 24309427 ~ 24312747 (+)
G30748 NA non-coding upstream 122015 23907305 ~ 24030741 (+)
G30754 NA non-coding upstream 142865 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 151192 23978432 ~ 24001564 (+)
LOC122343177 NA non-coding upstream 176236 23967713 ~ 23976520 (+)
G30746 NA non-coding upstream 323172 23801556 ~ 23829584 (+)
G30819 NA non-coding downstream 153840 24310339 ~ 24314288 (+)
LOC122343172 NA non-coding downstream 261344 24417843 ~ 24419568 (+)
G30812 NA non-coding downstream 299523 24456022 ~ 24486887 (+)
G30877 NA non-coding downstream 558198 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 832368 24988867 ~ 24989274 (+)
LOC122342990 NA other upstream 11310 24133050 ~ 24141446 (+)
LOC122342976 usp15,LOC107685889 other upstream 21269 24117289 ~ 24131487 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 984749 23163695 ~ 23168007 (+)
G30632 NA other upstream 993000 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 1022567 23129106 ~ 23130189 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 297771 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 308955 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 479853 24636352 ~ 24638654 (+)
LOC122343125 NA other downstream 482590 24639089 ~ 24646601 (+)
LOC122343086 NA other downstream 516392 24672891 ~ 24674412 (+)

Expression


Co-expression Network